RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 KRTAP19-6Q3LI70 58 aa9.55□□□□□ -0.88
SMPDL3A-202ENST00000487215 LINC00846Q9NV44 126 aa9.55□□□□□ -0.88
SMPDL3A-202ENST00000487215 CCKP06307 115 aa9.54□□□□□ -0.88
SMPDL3A-202ENST00000487215 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
SMPDL3A-202ENST00000487215 A0A1B0GV72 72 aa9.52□□□□□ -0.89
SMPDL3A-202ENST00000487215 UBE2V1Q13404 147 aa9.52□□□□□ -0.89
SMPDL3A-202ENST00000487215 LINC00472Q9H8W2 130 aa9.52□□□□□ -0.89
SMPDL3A-202ENST00000487215 IGHV6-1A0A0B4J1U7 121 aa9.49□□□□□ -0.89
SMPDL3A-202ENST00000487215 K7ERJ3 54 aa9.48□□□□□ -0.89
SMPDL3A-202ENST00000487215 DEFB116Q30KQ4 102 aa9.48□□□□□ -0.89
SMPDL3A-202ENST00000487215 C8orf87E5RJ46 101 aa9.46□□□□□ -0.9
SMPDL3A-202ENST00000487215 C21orf62-AS1Q17RA5 79 aa9.46□□□□□ -0.9
SMPDL3A-202ENST00000487215 RBM3P98179 157 aaKnown RBP9.45□□□□□ -0.9
SMPDL3A-202ENST00000487215 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
SMPDL3A-202ENST00000487215 SCGB1C2P0DMR2 95 aa9.44□□□□□ -0.9
SMPDL3A-202ENST00000487215 PYY3Q5JQD4 70 aa9.44□□□□□ -0.9
SMPDL3A-202ENST00000487215 VPS25Q9BRG1 176 aa9.43□□□□□ -0.9
SMPDL3A-202ENST00000487215 UQCR10Q9UDW1 63 aa9.43□□□□□ -0.9
SMPDL3A-202ENST00000487215 MTURNQ8N3F0 131 aa9.42□□□□□ -0.9
SMPDL3A-202ENST00000487215 A0A1B0GVX0 72 aa9.41□□□□□ -0.9
SMPDL3A-202ENST00000487215 J3KT08 172 aa9.41□□□□□ -0.9
SMPDL3A-202ENST00000487215 KRTAP6-3Q3LI67 103 aa9.38□□□□□ -0.91
SMPDL3A-202ENST00000487215 C9JAW5 83 aa9.37□□□□□ -0.91
SMPDL3A-202ENST00000487215 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
SMPDL3A-202ENST00000487215 NDUFB1O75438 58 aa9.34□□□□□ -0.91
SMPDL3A-202ENST00000487215 ZCCHC13Q8WW36 166 aaKnown RBP9.34□□□□□ -0.91
SMPDL3A-202ENST00000487215 A8MWP4 228 aa9.33□□□□□ -0.92
SMPDL3A-202ENST00000487215 SPINK7P58062 85 aa9.33□□□□□ -0.92
SMPDL3A-202ENST00000487215 Q6ZQT0 140 aa9.31□□□□□ -0.92
SMPDL3A-202ENST00000487215 Q8N9P0 234 aaPredicted RBP9.3□□□□□ -0.92
SMPDL3A-202ENST00000487215 A0A1B0GW54 56 aa9.29□□□□□ -0.92
SMPDL3A-202ENST00000487215 JMJD7-PLA2G4BH0Y9G9 81 aa9.27□□□□□ -0.93
SMPDL3A-202ENST00000487215 PDE6GP18545 87 aa9.25□□□□□ -0.93
SMPDL3A-202ENST00000487215 ATXN8Q156A1 80 aa9.24□□□□□ -0.93
SMPDL3A-202ENST00000487215 LYRM7Q5U5X0 104 aa9.24□□□□□ -0.93
SMPDL3A-202ENST00000487215 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
SMPDL3A-202ENST00000487215 LOC110117498A0A087WWA1 95 aa9.21□□□□□ -0.94
SMPDL3A-202ENST00000487215 C8orf17Q9NRJ1 99 aa9.21□□□□□ -0.94
SMPDL3A-202ENST00000487215 M0R143 59 aa9.2□□□□□ -0.94
SMPDL3A-202ENST00000487215 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
SMPDL3A-202ENST00000487215 NEBP20929 6669 aa9.17□□□□□ -0.94
SMPDL3A-202ENST00000487215 IGKV3D-7A0A0C4DH55 119 aa9.15□□□□□ -0.94
SMPDL3A-202ENST00000487215 Q6ZVQ6 151 aa9.15□□□□□ -0.94
SMPDL3A-202ENST00000487215 NREPQ16612 68 aa9.12□□□□□ -0.95
SMPDL3A-202ENST00000487215 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
SMPDL3A-202ENST00000487215 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
SMPDL3A-202ENST00000487215 NAA38Q9BRA0 125 aaKnown RBP9.1□□□□□ -0.95
SMPDL3A-202ENST00000487215 TMEM254Q8TBM7 123 aa9.08□□□□□ -0.96
SMPDL3A-202ENST00000487215 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
SMPDL3A-202ENST00000487215 MUC12Q9UKN1 5478 aa9.06□□□□□ -0.96
SMPDL3A-202ENST00000487215 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
SMPDL3A-202ENST00000487215 MMP24-AS1A0A0U1RRL7 71 aa9.01□□□□□ -0.97
SMPDL3A-202ENST00000487215 hDV103S1A0JD37 113 aa9.01□□□□□ -0.97
SMPDL3A-202ENST00000487215 NDUFS5O43920 106 aa9□□□□□ -0.97
SMPDL3A-202ENST00000487215 K7EQZ3 153 aa8.95□□□□□ -0.98
SMPDL3A-202ENST00000487215 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
SMPDL3A-202ENST00000487215 H3BT86 120 aa8.94□□□□□ -0.98
SMPDL3A-202ENST00000487215 BPY2O14599 106 aa8.93□□□□□ -0.98
SMPDL3A-202ENST00000487215 A6NN06 94 aa8.92□□□□□ -0.98
SMPDL3A-202ENST00000487215 TSTD3H0UI37 97 aa8.92□□□□□ -0.98
SMPDL3A-202ENST00000487215 KRTAP20-1Q3LI63 56 aa8.92□□□□□ -0.98
SMPDL3A-202ENST00000487215 BATFQ16520 125 aa8.91□□□□□ -0.98
SMPDL3A-202ENST00000487215 C7orf65Q6ZTY9 151 aa8.91□□□□□ -0.98
SMPDL3A-202ENST00000487215 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.98
SMPDL3A-202ENST00000487215 IGKV2-30P06310 120 aa8.9□□□□□ -0.98
SMPDL3A-202ENST00000487215 LOC105371267A0A1B0GV96 52 aa8.88□□□□□ -0.99
SMPDL3A-202ENST00000487215 C9orf118A6NHY6 69 aa8.87□□□□□ -0.99
SMPDL3A-202ENST00000487215 MT1BP07438 61 aa8.86□□□□□ -0.99
SMPDL3A-202ENST00000487215 A0A1W2PPM0 123 aa8.83□□□□□ -1
SMPDL3A-202ENST00000487215 Q5W150 140 aa8.83□□□□□ -1
SMPDL3A-202ENST00000487215 CASC2Q6XLA1 102 aa8.83□□□□□ -1
SMPDL3A-202ENST00000487215 HCG22E2RYF7 251 aa8.8□□□□□ -1
SMPDL3A-202ENST00000487215 CXCL6P80162 114 aa8.8□□□□□ -1
SMPDL3A-202ENST00000487215 Q5VV11 94 aa8.79□□□□□ -1
SMPDL3A-202ENST00000487215 TAX1BP3O14907 124 aa8.78□□□□□ -1
SMPDL3A-202ENST00000487215 FAM236AA0A1B0GUQ0 79 aa8.77□□□□□ -1.01
SMPDL3A-202ENST00000487215 FAM236BA0A1B0GV22 79 aa8.77□□□□□ -1.01
SMPDL3A-202ENST00000487215 KRTAP5-9P26371 169 aa8.76□□□□□ -1.01
SMPDL3A-202ENST00000487215 Q8N9L7 120 aa8.76□□□□□ -1.01
SMPDL3A-202ENST00000487215 KRTAP19-8Q3LI54 63 aa8.75□□□□□ -1.01
SMPDL3A-202ENST00000487215 MDN1Q9NU22 5596 aa8.74□□□□□ -1.01
SMPDL3A-202ENST00000487215 KRTAP10-5P60370 271 aa8.74□□□□□ -1.01
SMPDL3A-202ENST00000487215 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
SMPDL3A-202ENST00000487215 C5orf47Q569G3 176 aa8.74□□□□□ -1.01
SMPDL3A-202ENST00000487215 KMT2DO14686 5537 aa8.73□□□□□ -1.01
SMPDL3A-202ENST00000487215 SPRR2GQ9BYE4 73 aa8.72□□□□□ -1.01
SMPDL3A-202ENST00000487215 UBL5Q9BZL1 73 aa8.71□□□□□ -1.02
SMPDL3A-202ENST00000487215 SPCS1Q9Y6A9 102 aa8.71□□□□□ -1.02
SMPDL3A-202ENST00000487215 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
SMPDL3A-202ENST00000487215 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
SMPDL3A-202ENST00000487215 CSAG1Q6PB30 78 aa8.62□□□□□ -1.03
SMPDL3A-202ENST00000487215 S4R3F8 94 aa8.62□□□□□ -1.03
SMPDL3A-202ENST00000487215 C1orf64Q8NEQ6 169 aa8.59□□□□□ -1.03
SMPDL3A-202ENST00000487215 KRTAP3-1Q9BYR8 98 aa8.59□□□□□ -1.03
SMPDL3A-202ENST00000487215 TP53AIP1Q9HCN2 124 aa8.59□□□□□ -1.03
SMPDL3A-202ENST00000487215 KRTAP2-3P0C7H8 128 aa8.55□□□□□ -1.04
SMPDL3A-202ENST00000487215 KRTAP2-4Q9BYR9 128 aa8.55□□□□□ -1.04
SMPDL3A-202ENST00000487215 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
SMPDL3A-202ENST00000487215 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
SMPDL3A-202ENST00000487215 LCA10Q71F78 164 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms