RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 A0A1B0GX51 115 aa3.44□□□□□ -1.86
RTFDC1-209ENST00000487211 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
RTFDC1-209ENST00000487211 OCIAD2Q56VL3 154 aa3.44□□□□□ -1.86
RTFDC1-209ENST00000487211 NAA38Q9BRA0 125 aaKnown RBP3.44□□□□□ -1.86
RTFDC1-209ENST00000487211 COX6CP09669 75 aa3.43□□□□□ -1.86
RTFDC1-209ENST00000487211 SCGB1C2P0DMR2 95 aa3.43□□□□□ -1.86
RTFDC1-209ENST00000487211 BATFQ16520 125 aa3.43□□□□□ -1.86
RTFDC1-209ENST00000487211 PPDPFLQ8WWR9 84 aa3.43□□□□□ -1.86
RTFDC1-209ENST00000487211 SNHG12Q9BXW3 62 aa3.43□□□□□ -1.86
RTFDC1-209ENST00000487211 H3BUT2 72 aa3.42□□□□□ -1.86
RTFDC1-209ENST00000487211 SNCGO76070 127 aa3.42□□□□□ -1.86
RTFDC1-209ENST00000487211 FABP2P12104 132 aa3.42□□□□□ -1.86
RTFDC1-209ENST00000487211 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
RTFDC1-209ENST00000487211 CD164Q04900 197 aa3.42□□□□□ -1.86
RTFDC1-209ENST00000487211 IGFL1Q6UW32 110 aa3.42□□□□□ -1.86
RTFDC1-209ENST00000487211 Q8N9L7 120 aa3.42□□□□□ -1.86
RTFDC1-209ENST00000487211 LST1O00453 97 aa3.41□□□□□ -1.86
RTFDC1-209ENST00000487211 F8WEM9 126 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 H3BMG7 143 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 TAX1BP3O14907 124 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 TCL1BO95988 128 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 TRACP01848 142 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 Q6JHZ5 121 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 ORMDL1Q9P0S3 153 aa3.4□□□□□ -1.87
RTFDC1-209ENST00000487211 TMEM256-PLSCR3K7ERE1 68 aa3.39□□□□□ -1.87
RTFDC1-209ENST00000487211 DNAL4O96015 105 aa3.39□□□□□ -1.87
RTFDC1-209ENST00000487211 BAALC-AS2P0C853 105 aa3.39□□□□□ -1.87
RTFDC1-209ENST00000487211 Q5XG85 94 aa3.39□□□□□ -1.87
RTFDC1-209ENST00000487211 TRBV7-7A0A0K0K1E9 115 aa3.38□□□□□ -1.87
RTFDC1-209ENST00000487211 C1orf195Q5TG92 126 aa3.38□□□□□ -1.87
RTFDC1-209ENST00000487211 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
RTFDC1-209ENST00000487211 A0A1B0GV72 72 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 A0A1W2PNM2 257 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 H3BQ85 93 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 ATXN8Q156A1 80 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 KRTAP13-3Q3SY46 172 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 Q6Q795 121 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 LIMD2Q9BT23 127 aa3.37□□□□□ -1.87
RTFDC1-209ENST00000487211 A0A1W2PPM0 123 aa3.36□□□□□ -1.87
RTFDC1-209ENST00000487211 TEN1Q86WV5 123 aa3.36□□□□□ -1.87
RTFDC1-209ENST00000487211 ANKRD29Q8N6D5 301 aa3.36□□□□□ -1.87
RTFDC1-209ENST00000487211 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
RTFDC1-209ENST00000487211 TRBV20-1A0A075B6N2 111 aa3.35□□□□□ -1.87
RTFDC1-209ENST00000487211 ASB16-AS1Q495Z4 193 aa3.35□□□□□ -1.87
RTFDC1-209ENST00000487211 A0A087WSZ3 146 aa3.34□□□□□ -1.87
RTFDC1-209ENST00000487211 TRBV7-4A0A0J9YYF1 115 aa3.34□□□□□ -1.87
RTFDC1-209ENST00000487211 C9JAW5 83 aa3.34□□□□□ -1.87
RTFDC1-209ENST00000487211 RBM3P98179 157 aaKnown RBP3.34□□□□□ -1.87
RTFDC1-209ENST00000487211 DEFB116Q30KQ4 102 aa3.34□□□□□ -1.87
RTFDC1-209ENST00000487211 COL5A1-AS1Q5SY13 56 aa3.34□□□□□ -1.87
RTFDC1-209ENST00000487211 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
RTFDC1-209ENST00000487211 C9orf92A6NGG3 77 aa3.32□□□□□ -1.88
RTFDC1-209ENST00000487211 CCKP06307 115 aa3.32□□□□□ -1.88
RTFDC1-209ENST00000487211 LYRM7Q5U5X0 104 aa3.32□□□□□ -1.88
RTFDC1-209ENST00000487211 OBSCN-AS1Q96MR7 158 aa3.32□□□□□ -1.88
RTFDC1-209ENST00000487211 Q96NJ1 140 aa3.32□□□□□ -1.88
RTFDC1-209ENST00000487211 DSCR8Q96T75 97 aa3.32□□□□□ -1.88
RTFDC1-209ENST00000487211 SPCS1Q9Y6A9 102 aa3.32□□□□□ -1.88
RTFDC1-209ENST00000487211 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
RTFDC1-209ENST00000487211 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
RTFDC1-209ENST00000487211 JMJD7-PLA2G4BH0Y9G9 81 aa3.3□□□□□ -1.88
RTFDC1-209ENST00000487211 Q6ZQT0 140 aa3.3□□□□□ -1.88
RTFDC1-209ENST00000487211 VPS25Q9BRG1 176 aa3.3□□□□□ -1.88
RTFDC1-209ENST00000487211 C14orf132Q9NPU4 83 aa3.3□□□□□ -1.88
RTFDC1-209ENST00000487211 SS18L2Q9UHA2 77 aa3.3□□□□□ -1.88
RTFDC1-209ENST00000487211 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
RTFDC1-209ENST00000487211 H3BT86 120 aa3.29□□□□□ -1.88
RTFDC1-209ENST00000487211 KRTAP4-1Q9BYQ7 146 aa3.29□□□□□ -1.88
RTFDC1-209ENST00000487211 LINC00472Q9H8W2 130 aa3.29□□□□□ -1.88
RTFDC1-209ENST00000487211 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
RTFDC1-209ENST00000487211 A0A1B0GVX0 72 aa3.28□□□□□ -1.88
RTFDC1-209ENST00000487211 K7EP34 96 aa3.28□□□□□ -1.88
RTFDC1-209ENST00000487211 IGKV4-1P06312 121 aa3.27□□□□□ -1.89
RTFDC1-209ENST00000487211 PDE6GP18545 87 aa3.27□□□□□ -1.89
RTFDC1-209ENST00000487211 C5orf47Q569G3 176 aa3.26□□□□□ -1.89
RTFDC1-209ENST00000487211 PCOTHQ58A44 107 aa3.25□□□□□ -1.89
RTFDC1-209ENST00000487211 KMT2DO14686 5537 aa3.25□□□□□ -1.89
RTFDC1-209ENST00000487211 A0A1B0GW54 56 aa3.24□□□□□ -1.89
RTFDC1-209ENST00000487211 RPL37P61927 97 aaKnown RBP3.24□□□□□ -1.89
RTFDC1-209ENST00000487211 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
RTFDC1-209ENST00000487211 GTF2H5Q6ZYL4 71 aa3.24□□□□□ -1.89
RTFDC1-209ENST00000487211 SIGMAR1Q99720 223 aa3.24□□□□□ -1.89
RTFDC1-209ENST00000487211 F8W1H4 67 aa3.23□□□□□ -1.89
RTFDC1-209ENST00000487211 LINC00313P59037 77 aa3.23□□□□□ -1.89
RTFDC1-209ENST00000487211 NREPQ16612 68 aa3.23□□□□□ -1.89
RTFDC1-209ENST00000487211 IGHV6-1A0A0B4J1U7 121 aa3.22□□□□□ -1.89
RTFDC1-209ENST00000487211 IGKV3D-7A0A0C4DH55 119 aa3.21□□□□□ -1.9
RTFDC1-209ENST00000487211 A8MUU9 505 aa3.21□□□□□ -1.9
RTFDC1-209ENST00000487211 J3KT08 172 aa3.21□□□□□ -1.9
RTFDC1-209ENST00000487211 ETDBQ3ZM63 59 aa3.21□□□□□ -1.9
RTFDC1-209ENST00000487211 C20orf166-AS1Q96NR2 134 aa3.21□□□□□ -1.9
RTFDC1-209ENST00000487211 V9GYY9 64 aa3.21□□□□□ -1.9
RTFDC1-209ENST00000487211 A0A1B0GV90 55 aa3.2□□□□□ -1.9
RTFDC1-209ENST00000487211 LINC00846Q9NV44 126 aa3.2□□□□□ -1.9
RTFDC1-209ENST00000487211 A8MWP4 228 aa3.19□□□□□ -1.9
RTFDC1-209ENST00000487211 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
RTFDC1-209ENST00000487211 C8orf87E5RJ46 101 aa3.18□□□□□ -1.9
RTFDC1-209ENST00000487211 NDUFB1O75438 58 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms