RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 PKD1P98161 4303 aa9.96□□□□□ -0.81
FDPS-212ENST00000487002 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
FDPS-212ENST00000487002 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
FDPS-212ENST00000487002 PRR4Q16378 134 aa9.89□□□□□ -0.83
FDPS-212ENST00000487002 HYDINQ4G0P3 5121 aa9.89□□□□□ -0.83
FDPS-212ENST00000487002 NDUFS5O43920 106 aa9.89□□□□□ -0.83
FDPS-212ENST00000487002 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
FDPS-212ENST00000487002 C8orf87E5RJ46 101 aa9.87□□□□□ -0.83
FDPS-212ENST00000487002 A0A087X002 238 aa9.87□□□□□ -0.83
FDPS-212ENST00000487002 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
FDPS-212ENST00000487002 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
FDPS-212ENST00000487002 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
FDPS-212ENST00000487002 LRP1BQ9NZR2 4599 aa9.84□□□□□ -0.83
FDPS-212ENST00000487002 IGLV7-46A0A075B6I9 117 aa9.83□□□□□ -0.84
FDPS-212ENST00000487002 Q1T7F1 81 aa9.83□□□□□ -0.84
FDPS-212ENST00000487002 KRTAP1-4P0C5Y4 121 aa9.82□□□□□ -0.84
FDPS-212ENST00000487002 LIMD2Q9BT23 127 aa9.79□□□□□ -0.84
FDPS-212ENST00000487002 LOC101927531A0A1B0GV80 90 aa9.78□□□□□ -0.84
FDPS-212ENST00000487002 C1orf195Q5TG92 126 aa9.77□□□□□ -0.85
FDPS-212ENST00000487002 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
FDPS-212ENST00000487002 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
FDPS-212ENST00000487002 PCOTHQ58A44 107 aa9.76□□□□□ -0.85
FDPS-212ENST00000487002 V9GYY9 64 aa9.75□□□□□ -0.85
FDPS-212ENST00000487002 VPS13BQ7Z7G8 4022 aa9.74□□□□□ -0.85
FDPS-212ENST00000487002 LINC00313P59037 77 aa9.74□□□□□ -0.85
FDPS-212ENST00000487002 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
FDPS-212ENST00000487002 Q5W150 140 aa9.71□□□□□ -0.86
FDPS-212ENST00000487002 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.86
FDPS-212ENST00000487002 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
FDPS-212ENST00000487002 COA5Q86WW8 74 aa9.7□□□□□ -0.86
FDPS-212ENST00000487002 PRO0628Q9UI54 55 aa9.7□□□□□ -0.86
FDPS-212ENST00000487002 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
FDPS-212ENST00000487002 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
FDPS-212ENST00000487002 TYMSOSQ8TAI1 123 aa9.68□□□□□ -0.86
FDPS-212ENST00000487002 SPINK1P00995 79 aa9.67□□□□□ -0.86
FDPS-212ENST00000487002 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
FDPS-212ENST00000487002 RPS29P62273 56 aaKnown RBP9.63□□□□□ -0.87
FDPS-212ENST00000487002 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
FDPS-212ENST00000487002 BRK1Q8WUW1 75 aa9.62□□□□□ -0.87
FDPS-212ENST00000487002 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
FDPS-212ENST00000487002 PSPHP1O15172 72 aa9.6□□□□□ -0.87
FDPS-212ENST00000487002 HRES1P13985 223 aa9.58□□□□□ -0.88
FDPS-212ENST00000487002 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
FDPS-212ENST00000487002 LINC00304Q8N9R0 145 aa9.57□□□□□ -0.88
FDPS-212ENST00000487002 DYNC1H1Q14204 4646 aaKnown RBP9.57□□□□□ -0.88
FDPS-212ENST00000487002 A8MUN3 132 aa9.56□□□□□ -0.88
FDPS-212ENST00000487002 IGKV2-30P06310 120 aa9.55□□□□□ -0.88
FDPS-212ENST00000487002 PRR26Q8N8Z3 221 aa9.54□□□□□ -0.88
FDPS-212ENST00000487002 Q5VV11 94 aa9.53□□□□□ -0.88
FDPS-212ENST00000487002 DMAC1Q96GE9 116 aa9.5□□□□□ -0.89
FDPS-212ENST00000487002 ACYP2P14621 99 aa9.49□□□□□ -0.89
FDPS-212ENST00000487002 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
FDPS-212ENST00000487002 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
FDPS-212ENST00000487002 APOBP04114 4563 aaKnown RBP9.48□□□□□ -0.89
FDPS-212ENST00000487002 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
FDPS-212ENST00000487002 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
FDPS-212ENST00000487002 RETNLBQ9BQ08 111 aa9.48□□□□□ -0.89
FDPS-212ENST00000487002 Q75L30 129 aa9.46□□□□□ -0.89
FDPS-212ENST00000487002 PKHD1L1Q86WI1 4243 aa9.45□□□□□ -0.9
FDPS-212ENST00000487002 RYR2Q92736 4967 aa9.44□□□□□ -0.9
FDPS-212ENST00000487002 CHKB-CPT1BH3BT56 60 aa9.42□□□□□ -0.9
FDPS-212ENST00000487002 KMT2CQ8NEZ4 4911 aaKnown RBP9.39□□□□□ -0.91
FDPS-212ENST00000487002 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
FDPS-212ENST00000487002 FAT1Q14517 4588 aa9.36□□□□□ -0.91
FDPS-212ENST00000487002 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
FDPS-212ENST00000487002 A6NED7 52 aa9.31□□□□□ -0.92
FDPS-212ENST00000487002 C20orf166-AS1Q96NR2 134 aa9.31□□□□□ -0.92
FDPS-212ENST00000487002 A8MUU9 505 aa9.3□□□□□ -0.92
FDPS-212ENST00000487002 CDC42SE1Q9NRR8 79 aa9.24□□□□□ -0.93
FDPS-212ENST00000487002 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
FDPS-212ENST00000487002 LCA10Q71F78 164 aa9.23□□□□□ -0.93
FDPS-212ENST00000487002 A8MU10 97 aa9.22□□□□□ -0.93
FDPS-212ENST00000487002 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
FDPS-212ENST00000487002 SPINK7P58062 85 aa9.17□□□□□ -0.94
FDPS-212ENST00000487002 RYR3Q15413 4870 aa9.16□□□□□ -0.94
FDPS-212ENST00000487002 A0A1B0GU69 56 aa9.15□□□□□ -0.94
FDPS-212ENST00000487002 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
FDPS-212ENST00000487002 Q5VSD8 79 aa9.13□□□□□ -0.95
FDPS-212ENST00000487002 KRTAP10-8P60410 259 aa9.12□□□□□ -0.95
FDPS-212ENST00000487002 Q8N1X5 172 aa9.12□□□□□ -0.95
FDPS-212ENST00000487002 TNXBP22105 4242 aa9.11□□□□□ -0.95
FDPS-212ENST00000487002 PMAIP1Q13794 54 aa9.1□□□□□ -0.95
FDPS-212ENST00000487002 HSPG2P98160 4391 aa9.09□□□□□ -0.95
FDPS-212ENST00000487002 SPTSSBQ8NFR3 76 aa9.09□□□□□ -0.95
FDPS-212ENST00000487002 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
FDPS-212ENST00000487002 RYR1P21817 5038 aa9.02□□□□□ -0.97
FDPS-212ENST00000487002 A6NN06 94 aa9□□□□□ -0.97
FDPS-212ENST00000487002 LRP1Q07954 4544 aaKnown RBP8.99□□□□□ -0.97
FDPS-212ENST00000487002 UQCR11O14957 56 aa8.98□□□□□ -0.97
FDPS-212ENST00000487002 KRTAP3-1Q9BYR8 98 aa8.98□□□□□ -0.97
FDPS-212ENST00000487002 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
FDPS-212ENST00000487002 SEC61GP60059 68 aa8.95□□□□□ -0.98
FDPS-212ENST00000487002 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
FDPS-212ENST00000487002 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
FDPS-212ENST00000487002 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
FDPS-212ENST00000487002 KTN1-AS1Q86SY8 53 aa8.92□□□□□ -0.98
FDPS-212ENST00000487002 XP32Q5T750 250 aa8.88□□□□□ -0.99
FDPS-212ENST00000487002 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
FDPS-212ENST00000487002 MT1HL1P0DM35 61 aa8.85□□□□□ -0.99
FDPS-212ENST00000487002 EPPK1P58107 5090 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms