RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 FAT1Q14517 4588 aa6.68□□□□□ -1.34
PRKCB-207ENST00000486868 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
PRKCB-207ENST00000486868 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
PRKCB-207ENST00000486868 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
PRKCB-207ENST00000486868 RYR3Q15413 4870 aa6.66□□□□□ -1.34
PRKCB-207ENST00000486868 TP53AIP1Q9HCN2 124 aa6.66□□□□□ -1.34
PRKCB-207ENST00000486868 IGHV6-1A0A0B4J1U7 121 aa6.65□□□□□ -1.34
PRKCB-207ENST00000486868 Q5VSD8 79 aa6.65□□□□□ -1.34
PRKCB-207ENST00000486868 H3BPC8 53 aa6.64□□□□□ -1.35
PRKCB-207ENST00000486868 NDUFC1O43677 76 aa6.64□□□□□ -1.35
PRKCB-207ENST00000486868 C20orf197Q8N268 126 aa6.64□□□□□ -1.35
PRKCB-207ENST00000486868 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
PRKCB-207ENST00000486868 PKHD1L1Q86WI1 4243 aa6.63□□□□□ -1.35
PRKCB-207ENST00000486868 A0A0U1RQV1 116 aa6.62□□□□□ -1.35
PRKCB-207ENST00000486868 Q8N1X5 172 aa6.61□□□□□ -1.35
PRKCB-207ENST00000486868 RYR1P21817 5038 aa6.61□□□□□ -1.35
PRKCB-207ENST00000486868 LINC00313P59037 77 aa6.6□□□□□ -1.35
PRKCB-207ENST00000486868 KRTAP10-8P60410 259 aa6.6□□□□□ -1.35
PRKCB-207ENST00000486868 HSPG2P98160 4391 aa6.6□□□□□ -1.35
PRKCB-207ENST00000486868 MP68P56378 58 aa6.59□□□□□ -1.35
PRKCB-207ENST00000486868 TMEM258P61165 79 aa6.59□□□□□ -1.35
PRKCB-207ENST00000486868 ZCCHC13Q8WW36 166 aaKnown RBP6.58□□□□□ -1.36
PRKCB-207ENST00000486868 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
PRKCB-207ENST00000486868 H7BZZ5 65 aa6.56□□□□□ -1.36
PRKCB-207ENST00000486868 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
PRKCB-207ENST00000486868 CYSTM1Q9H1C7 97 aa6.56□□□□□ -1.36
PRKCB-207ENST00000486868 SNURFQ9Y675 71 aa6.55□□□□□ -1.36
PRKCB-207ENST00000486868 TRAV22A0A0B4J277 110 aa6.54□□□□□ -1.36
PRKCB-207ENST00000486868 H0Y9P7 68 aa6.53□□□□□ -1.36
PRKCB-207ENST00000486868 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
PRKCB-207ENST00000486868 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
PRKCB-207ENST00000486868 NDUFS5O43920 106 aa6.5□□□□□ -1.37
PRKCB-207ENST00000486868 OXTP01178 125 aa6.49□□□□□ -1.37
PRKCB-207ENST00000486868 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
PRKCB-207ENST00000486868 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
PRKCB-207ENST00000486868 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
PRKCB-207ENST00000486868 FP248Q71RG6 208 aaPredicted RBP6.48□□□□□ -1.37
PRKCB-207ENST00000486868 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
PRKCB-207ENST00000486868 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
PRKCB-207ENST00000486868 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
PRKCB-207ENST00000486868 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
PRKCB-207ENST00000486868 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
PRKCB-207ENST00000486868 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
PRKCB-207ENST00000486868 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
PRKCB-207ENST00000486868 FLG2Q5D862 2391 aaPredicted RBP6.43□□□□□ -1.38
PRKCB-207ENST00000486868 TNXBP22105 4242 aa6.43□□□□□ -1.38
PRKCB-207ENST00000486868 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
PRKCB-207ENST00000486868 FAT3Q8TDW7 4589 aa6.43□□□□□ -1.38
PRKCB-207ENST00000486868 Q5W150 140 aa6.42□□□□□ -1.38
PRKCB-207ENST00000486868 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
PRKCB-207ENST00000486868 A8MUU9 505 aa6.41□□□□□ -1.38
PRKCB-207ENST00000486868 CYP4F30PQ9H0H9 118 aa6.4□□□□□ -1.38
PRKCB-207ENST00000486868 EPPK1P58107 5090 aaKnown RBP6.39□□□□□ -1.39
PRKCB-207ENST00000486868 SERP1Q9Y6X1 66 aa6.39□□□□□ -1.39
PRKCB-207ENST00000486868 LRP1Q07954 4544 aaKnown RBP6.38□□□□□ -1.39
PRKCB-207ENST00000486868 IGLV7-46A0A075B6I9 117 aa6.37□□□□□ -1.39
PRKCB-207ENST00000486868 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
PRKCB-207ENST00000486868 Q75L30 129 aa6.36□□□□□ -1.39
PRKCB-207ENST00000486868 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
PRKCB-207ENST00000486868 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
PRKCB-207ENST00000486868 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
PRKCB-207ENST00000486868 DMBT1Q9UGM3 2413 aaPredicted RBP6.3□□□□□ -1.4
PRKCB-207ENST00000486868 BIRC6Q9NR09 4857 aa6.3□□□□□ -1.4
PRKCB-207ENST00000486868 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
PRKCB-207ENST00000486868 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
PRKCB-207ENST00000486868 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
PRKCB-207ENST00000486868 SMIM26A0A096LP01 95 aa6.24□□□□□ -1.41
PRKCB-207ENST00000486868 HRES1P13985 223 aa6.24□□□□□ -1.41
PRKCB-207ENST00000486868 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
PRKCB-207ENST00000486868 HERC2O95714 4834 aa6.24□□□□□ -1.41
PRKCB-207ENST00000486868 MYCBP2O75592 4640 aa6.24□□□□□ -1.41
PRKCB-207ENST00000486868 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
PRKCB-207ENST00000486868 XP32Q5T750 250 aa6.22□□□□□ -1.41
PRKCB-207ENST00000486868 ATP11AUNQ6ZP68 121 aa6.22□□□□□ -1.41
PRKCB-207ENST00000486868 PRR4Q16378 134 aa6.21□□□□□ -1.42
PRKCB-207ENST00000486868 DMAC1Q96GE9 116 aa6.21□□□□□ -1.42
PRKCB-207ENST00000486868 ACYP2P14621 99 aa6.2□□□□□ -1.42
PRKCB-207ENST00000486868 A8MUN3 132 aa6.18□□□□□ -1.42
PRKCB-207ENST00000486868 J3QL48 77 aa6.18□□□□□ -1.42
PRKCB-207ENST00000486868 COA5Q86WW8 74 aa6.17□□□□□ -1.42
PRKCB-207ENST00000486868 SPINK7P58062 85 aa6.16□□□□□ -1.42
PRKCB-207ENST00000486868 V9GYY9 64 aa6.12□□□□□ -1.43
PRKCB-207ENST00000486868 Q1T7F1 81 aa6.1□□□□□ -1.43
PRKCB-207ENST00000486868 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
PRKCB-207ENST00000486868 C4orf26Q17RF5 130 aa6.06□□□□□ -1.44
PRKCB-207ENST00000486868 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
PRKCB-207ENST00000486868 CHKB-CPT1BH3BT56 60 aa6.05□□□□□ -1.44
PRKCB-207ENST00000486868 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
PRKCB-207ENST00000486868 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
PRKCB-207ENST00000486868 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
PRKCB-207ENST00000486868 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
PRKCB-207ENST00000486868 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
PRKCB-207ENST00000486868 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
PRKCB-207ENST00000486868 LRP2P98164 4655 aa5.92□□□□□ -1.46
PRKCB-207ENST00000486868 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
PRKCB-207ENST00000486868 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
PRKCB-207ENST00000486868 Q5VV11 94 aa5.89□□□□□ -1.47
PRKCB-207ENST00000486868 PRR15LQ9BU68 103 aa5.88□□□□□ -1.47
PRKCB-207ENST00000486868 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
PRKCB-207ENST00000486868 PSPHP1O15172 72 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms