RNA–Protein interactions for RNA: ENST00000486575.1

RANBP1-213, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 2,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-213ENST00000486575 Q6ZSA8 131 aa12.52□□□□□ -0.41
RANBP1-213ENST00000486575 ALMS1Q8TCU4 4167 aa12.51□□□□□ -0.41
RANBP1-213ENST00000486575 DNAH11Q96DT5 4516 aa12.51□□□□□ -0.41
RANBP1-213ENST00000486575 A0A087X002 238 aa12.5□□□□□ -0.41
RANBP1-213ENST00000486575 Q1T7F1 81 aa12.5□□□□□ -0.41
RANBP1-213ENST00000486575 NOTCH2NLQ7Z3S9 236 aa12.5□□□□□ -0.41
RANBP1-213ENST00000486575 NDUFS5O43920 106 aa12.48□□□□□ -0.41
RANBP1-213ENST00000486575 SPINK6Q6UWN8 80 aa12.46□□□□□ -0.42
RANBP1-213ENST00000486575 IGLV7-46A0A075B6I9 117 aa12.45□□□□□ -0.42
RANBP1-213ENST00000486575 KRTAP10-1P60331 282 aa12.45□□□□□ -0.42
RANBP1-213ENST00000486575 PRO0628Q9UI54 55 aa12.43□□□□□ -0.42
RANBP1-213ENST00000486575 PCOTHQ58A44 107 aa12.39□□□□□ -0.43
RANBP1-213ENST00000486575 KRTAP13-2Q52LG2 175 aa12.38□□□□□ -0.43
RANBP1-213ENST00000486575 PKD1P98161 4303 aa12.38□□□□□ -0.43
RANBP1-213ENST00000486575 C8orf87E5RJ46 101 aa12.37□□□□□ -0.43
RANBP1-213ENST00000486575 V9GYY9 64 aa12.35□□□□□ -0.43
RANBP1-213ENST00000486575 FAT2Q9NYQ8 4349 aa12.34□□□□□ -0.43
RANBP1-213ENST00000486575 BRK1Q8WUW1 75 aa12.33□□□□□ -0.44
RANBP1-213ENST00000486575 KRTAP13-3Q3SY46 172 aa12.32□□□□□ -0.44
RANBP1-213ENST00000486575 COA5Q86WW8 74 aa12.31□□□□□ -0.44
RANBP1-213ENST00000486575 LOC101927531A0A1B0GV80 90 aa12.3□□□□□ -0.44
RANBP1-213ENST00000486575 LRP1BQ9NZR2 4599 aa12.3□□□□□ -0.44
RANBP1-213ENST00000486575 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
RANBP1-213ENST00000486575 Q5W150 140 aa12.29□□□□□ -0.44
RANBP1-213ENST00000486575 HYDINQ4G0P3 5121 aa12.29□□□□□ -0.44
RANBP1-213ENST00000486575 C1orf195Q5TG92 126 aa12.29□□□□□ -0.44
RANBP1-213ENST00000486575 PSPHP1O15172 72 aa12.27□□□□□ -0.45
RANBP1-213ENST00000486575 Q8N9P0 234 aaPredicted RBP12.26□□□□□ -0.45
RANBP1-213ENST00000486575 LINC00313P59037 77 aa12.25□□□□□ -0.45
RANBP1-213ENST00000486575 LIMD2Q9BT23 127 aa12.22□□□□□ -0.45
RANBP1-213ENST00000486575 A8MUN3 132 aa12.21□□□□□ -0.45
RANBP1-213ENST00000486575 Q5VV11 94 aa12.16□□□□□ -0.46
RANBP1-213ENST00000486575 HRES1P13985 223 aa12.15□□□□□ -0.46
RANBP1-213ENST00000486575 FAM229AH3BQW9 127 aa12.15□□□□□ -0.47
RANBP1-213ENST00000486575 KRTAP16-1A8MUX0 517 aa12.13□□□□□ -0.47
RANBP1-213ENST00000486575 VPS13BQ7Z7G8 4022 aa12.13□□□□□ -0.47
RANBP1-213ENST00000486575 PLA2G1BP04054 148 aaKnown RBP12.12□□□□□ -0.47
RANBP1-213ENST00000486575 TYMSOSQ8TAI1 123 aa12.09□□□□□ -0.47
RANBP1-213ENST00000486575 PRR15LQ9BU68 103 aa12.09□□□□□ -0.47
RANBP1-213ENST00000486575 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
RANBP1-213ENST00000486575 SPINK1P00995 79 aa12.06□□□□□ -0.48
RANBP1-213ENST00000486575 IGKV2-30P06310 120 aa12.04□□□□□ -0.48
RANBP1-213ENST00000486575 LINC01558Q9Y6Z2 57 aa12.03□□□□□ -0.48
RANBP1-213ENST00000486575 Q75L30 129 aa12.02□□□□□ -0.48
RANBP1-213ENST00000486575 CHKB-CPT1BH3BT56 60 aa12.01□□□□□ -0.49
RANBP1-213ENST00000486575 RETNLBQ9BQ08 111 aa12.01□□□□□ -0.49
RANBP1-213ENST00000486575 SPAG11AQ6PDA7 123 aa12.01□□□□□ -0.49
RANBP1-213ENST00000486575 SACSQ9NZJ4 4579 aa11.99□□□□□ -0.49
RANBP1-213ENST00000486575 ACYP2P14621 99 aa11.99□□□□□ -0.49
RANBP1-213ENST00000486575 DMAC1Q96GE9 116 aa11.99□□□□□ -0.49
RANBP1-213ENST00000486575 KMT2CQ8NEZ4 4911 aaKnown RBP11.97□□□□□ -0.49
RANBP1-213ENST00000486575 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
RANBP1-213ENST00000486575 PRR26Q8N8Z3 221 aa11.95□□□□□ -0.5
RANBP1-213ENST00000486575 PKHD1P08F94 4074 aa11.94□□□□□ -0.5
RANBP1-213ENST00000486575 LINC00304Q8N9R0 145 aa11.94□□□□□ -0.5
RANBP1-213ENST00000486575 A0A1B0GVY2 172 aa11.9□□□□□ -0.5
RANBP1-213ENST00000486575 A8MU10 97 aa11.88□□□□□ -0.51
RANBP1-213ENST00000486575 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
RANBP1-213ENST00000486575 SMR3BP02814 79 aaPredicted RBP11.86□□□□□ -0.51
RANBP1-213ENST00000486575 A6NED7 52 aa11.86□□□□□ -0.51
RANBP1-213ENST00000486575 IGKV2D-30A0A075B6S6 120 aa11.84□□□□□ -0.51
RANBP1-213ENST00000486575 KRTAP10-4P60372 401 aaPredicted RBP11.82□□□□□ -0.52
RANBP1-213ENST00000486575 LCA10Q71F78 164 aa11.82□□□□□ -0.52
RANBP1-213ENST00000486575 RYR3Q15413 4870 aa11.81□□□□□ -0.52
RANBP1-213ENST00000486575 CDC42SE1Q9NRR8 79 aa11.77□□□□□ -0.53
RANBP1-213ENST00000486575 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
RANBP1-213ENST00000486575 SPINK7P58062 85 aa11.72□□□□□ -0.53
RANBP1-213ENST00000486575 RYR2Q92736 4967 aa11.71□□□□□ -0.53
RANBP1-213ENST00000486575 C7orf65Q6ZTY9 151 aa11.71□□□□□ -0.53
RANBP1-213ENST00000486575 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.53
RANBP1-213ENST00000486575 ATP11AUNQ6ZP68 121 aa11.7□□□□□ -0.54
RANBP1-213ENST00000486575 FAT1Q14517 4588 aa11.67□□□□□ -0.54
RANBP1-213ENST00000486575 PMAIP1Q13794 54 aa11.65□□□□□ -0.54
RANBP1-213ENST00000486575 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
RANBP1-213ENST00000486575 A8MUU9 505 aa11.64□□□□□ -0.55
RANBP1-213ENST00000486575 SPTSSBQ8NFR3 76 aa11.63□□□□□ -0.55
RANBP1-213ENST00000486575 C9orf92A6NGG3 77 aa11.61□□□□□ -0.55
RANBP1-213ENST00000486575 A0A1B0GU69 56 aa11.6□□□□□ -0.55
RANBP1-213ENST00000486575 Q8N1X5 172 aa11.53□□□□□ -0.56
RANBP1-213ENST00000486575 A6NN06 94 aa11.51□□□□□ -0.57
RANBP1-213ENST00000486575 FLG2Q5D862 2391 aaPredicted RBP11.44□□□□□ -0.58
RANBP1-213ENST00000486575 EPPK1P58107 5090 aaKnown RBP11.41□□□□□ -0.58
RANBP1-213ENST00000486575 KTN1-AS1Q86SY8 53 aa11.41□□□□□ -0.58
RANBP1-213ENST00000486575 SPATA8Q6RVD6 105 aa11.4□□□□□ -0.58
RANBP1-213ENST00000486575 UQCR11O14957 56 aa11.38□□□□□ -0.59
RANBP1-213ENST00000486575 KRTAP10-8P60410 259 aa11.36□□□□□ -0.59
RANBP1-213ENST00000486575 KRTAP3-1Q9BYR8 98 aa11.36□□□□□ -0.59
RANBP1-213ENST00000486575 MIR22HGQ0VDD5 57 aa11.33□□□□□ -0.6
RANBP1-213ENST00000486575 Q5VSD8 79 aa11.32□□□□□ -0.6
RANBP1-213ENST00000486575 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
RANBP1-213ENST00000486575 TNXBP22105 4242 aa11.3□□□□□ -0.6
RANBP1-213ENST00000486575 SEC61GP60059 68 aa11.27□□□□□ -0.6
RANBP1-213ENST00000486575 HSPG2P98160 4391 aa11.24□□□□□ -0.61
RANBP1-213ENST00000486575 LRP1Q07954 4544 aaKnown RBP11.24□□□□□ -0.61
RANBP1-213ENST00000486575 COX6B2Q6YFQ2 88 aa11.22□□□□□ -0.61
RANBP1-213ENST00000486575 BIRC6Q9NR09 4857 aa11.16□□□□□ -0.62
RANBP1-213ENST00000486575 RPL37P61927 97 aaKnown RBP11.15□□□□□ -0.62
RANBP1-213ENST00000486575 RYR1P21817 5038 aa11.11□□□□□ -0.63
RANBP1-213ENST00000486575 KRTAP17-1Q9BYP8 105 aa11.11□□□□□ -0.63
RANBP1-213ENST00000486575 XP32Q5T750 250 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms