RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MP68P56378 58 aa11.87□□□□□ -0.51
HPS3-206ENST00000486530 SPINK6Q6UWN8 80 aa11.84□□□□□ -0.51
HPS3-206ENST00000486530 Q5XG85 94 aa11.83□□□□□ -0.52
HPS3-206ENST00000486530 H3BPC8 53 aa11.82□□□□□ -0.52
HPS3-206ENST00000486530 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
HPS3-206ENST00000486530 H0Y9P7 68 aa11.81□□□□□ -0.52
HPS3-206ENST00000486530 TP53AIP1Q9HCN2 124 aa11.8□□□□□ -0.52
HPS3-206ENST00000486530 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
HPS3-206ENST00000486530 PLA2G1BP04054 148 aaKnown RBP11.8□□□□□ -0.52
HPS3-206ENST00000486530 SMR3BP02814 79 aaPredicted RBP11.79□□□□□ -0.52
HPS3-206ENST00000486530 MRPL34Q9BQ48 92 aaKnown RBP11.78□□□□□ -0.52
HPS3-206ENST00000486530 TRAV22A0A0B4J277 110 aa11.77□□□□□ -0.53
HPS3-206ENST00000486530 LINC00208Q96KT6 92 aa11.77□□□□□ -0.53
HPS3-206ENST00000486530 OXTP01178 125 aa11.76□□□□□ -0.53
HPS3-206ENST00000486530 LIMD2Q9BT23 127 aa11.76□□□□□ -0.53
HPS3-206ENST00000486530 NOTCH2NLQ7Z3S9 236 aa11.75□□□□□ -0.53
HPS3-206ENST00000486530 TYMSOSQ8TAI1 123 aa11.74□□□□□ -0.53
HPS3-206ENST00000486530 C8orf87E5RJ46 101 aa11.74□□□□□ -0.53
HPS3-206ENST00000486530 C1orf195Q5TG92 126 aa11.72□□□□□ -0.53
HPS3-206ENST00000486530 NDUFS5O43920 106 aa11.71□□□□□ -0.53
HPS3-206ENST00000486530 C4orf48Q5BLP8 95 aa11.71□□□□□ -0.53
HPS3-206ENST00000486530 KRTAP10-4P60372 401 aaPredicted RBP11.7□□□□□ -0.54
HPS3-206ENST00000486530 C1orf64Q8NEQ6 169 aa11.69□□□□□ -0.54
HPS3-206ENST00000486530 SPINK1P00995 79 aa11.68□□□□□ -0.54
HPS3-206ENST00000486530 FAT1Q14517 4588 aa11.67□□□□□ -0.54
HPS3-206ENST00000486530 LINC00313P59037 77 aa11.63□□□□□ -0.55
HPS3-206ENST00000486530 PRR26Q8N8Z3 221 aa11.63□□□□□ -0.55
HPS3-206ENST00000486530 CYP4F30PQ9H0H9 118 aa11.61□□□□□ -0.55
HPS3-206ENST00000486530 RPS29P62273 56 aaKnown RBP11.6□□□□□ -0.55
HPS3-206ENST00000486530 LINC00304Q8N9R0 145 aa11.6□□□□□ -0.55
HPS3-206ENST00000486530 SPANXA2-OT1Q8N9U9 137 aa11.59□□□□□ -0.55
HPS3-206ENST00000486530 SPAG11AQ6PDA7 123 aa11.59□□□□□ -0.55
HPS3-206ENST00000486530 SMIM26A0A096LP01 95 aa11.55□□□□□ -0.56
HPS3-206ENST00000486530 EPPK1P58107 5090 aaKnown RBP11.53□□□□□ -0.56
HPS3-206ENST00000486530 PRR4Q16378 134 aa11.53□□□□□ -0.56
HPS3-206ENST00000486530 Q8N9P0 234 aaPredicted RBP11.53□□□□□ -0.56
HPS3-206ENST00000486530 HSPG2P98160 4391 aa11.52□□□□□ -0.57
HPS3-206ENST00000486530 FAM229AH3BQW9 127 aa11.51□□□□□ -0.57
HPS3-206ENST00000486530 KRTAP13-3Q3SY46 172 aa11.51□□□□□ -0.57
HPS3-206ENST00000486530 LOC101927531A0A1B0GV80 90 aa11.49□□□□□ -0.57
HPS3-206ENST00000486530 KRTAP16-1A8MUX0 517 aa11.49□□□□□ -0.57
HPS3-206ENST00000486530 Q5W150 140 aa11.49□□□□□ -0.57
HPS3-206ENST00000486530 PCOTHQ58A44 107 aa11.47□□□□□ -0.57
HPS3-206ENST00000486530 PKHD1L1Q86WI1 4243 aa11.46□□□□□ -0.57
HPS3-206ENST00000486530 IGLV7-46A0A075B6I9 117 aa11.45□□□□□ -0.58
HPS3-206ENST00000486530 FP248Q71RG6 208 aaPredicted RBP11.44□□□□□ -0.58
HPS3-206ENST00000486530 Q5VSD8 79 aa11.42□□□□□ -0.58
HPS3-206ENST00000486530 KRTAP17-1Q9BYP8 105 aa11.42□□□□□ -0.58
HPS3-206ENST00000486530 RYR1P21817 5038 aa11.41□□□□□ -0.58
HPS3-206ENST00000486530 KIAA1109Q2LD37 5005 aa11.38□□□□□ -0.59
HPS3-206ENST00000486530 C4orf26Q17RF5 130 aa11.37□□□□□ -0.59
HPS3-206ENST00000486530 Q8N1X5 172 aa11.33□□□□□ -0.6
HPS3-206ENST00000486530 RETNLBQ9BQ08 111 aa11.32□□□□□ -0.6
HPS3-206ENST00000486530 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
HPS3-206ENST00000486530 MPLKIPQ8TAP9 179 aa11.29□□□□□ -0.6
HPS3-206ENST00000486530 COA5Q86WW8 74 aa11.27□□□□□ -0.61
HPS3-206ENST00000486530 KRTAP10-8P60410 259 aa11.24□□□□□ -0.61
HPS3-206ENST00000486530 Q1T7F1 81 aa11.23□□□□□ -0.61
HPS3-206ENST00000486530 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.61
HPS3-206ENST00000486530 TNXBP22105 4242 aa11.2□□□□□ -0.62
HPS3-206ENST00000486530 HRES1P13985 223 aa11.2□□□□□ -0.62
HPS3-206ENST00000486530 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
HPS3-206ENST00000486530 C9orf92A6NGG3 77 aa11.17□□□□□ -0.62
HPS3-206ENST00000486530 IGKV2D-30A0A075B6S6 120 aa11.16□□□□□ -0.62
HPS3-206ENST00000486530 C20orf166-AS1Q96NR2 134 aa11.16□□□□□ -0.62
HPS3-206ENST00000486530 V9GYY9 64 aa11.16□□□□□ -0.62
HPS3-206ENST00000486530 FAT3Q8TDW7 4589 aa11.15□□□□□ -0.62
HPS3-206ENST00000486530 A8MUU9 505 aa11.15□□□□□ -0.63
HPS3-206ENST00000486530 BIRC6Q9NR09 4857 aa11.14□□□□□ -0.63
HPS3-206ENST00000486530 DMAC1Q96GE9 116 aa11.12□□□□□ -0.63
HPS3-206ENST00000486530 KRTAP4-5Q9BYR2 181 aa11.12□□□□□ -0.63
HPS3-206ENST00000486530 ACYP2P14621 99 aa11.11□□□□□ -0.63
HPS3-206ENST00000486530 C7orf65Q6ZTY9 151 aa11.09□□□□□ -0.63
HPS3-206ENST00000486530 MT1HL1P0DM35 61 aa11.06□□□□□ -0.64
HPS3-206ENST00000486530 PSPHP1O15172 72 aa11.01□□□□□ -0.65
HPS3-206ENST00000486530 Q75L30 129 aa11□□□□□ -0.65
HPS3-206ENST00000486530 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
HPS3-206ENST00000486530 A8MUN3 132 aa10.97□□□□□ -0.65
HPS3-206ENST00000486530 CHKB-CPT1BH3BT56 60 aa10.96□□□□□ -0.65
HPS3-206ENST00000486530 HERC2O95714 4834 aa10.96□□□□□ -0.65
HPS3-206ENST00000486530 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
HPS3-206ENST00000486530 DMBT1Q9UGM3 2413 aaPredicted RBP10.93□□□□□ -0.66
HPS3-206ENST00000486530 PRR15LQ9BU68 103 aa10.92□□□□□ -0.66
HPS3-206ENST00000486530 Q5VV11 94 aa10.91□□□□□ -0.66
HPS3-206ENST00000486530 SVIPQ8NHG7 77 aa10.91□□□□□ -0.66
HPS3-206ENST00000486530 BRK1Q8WUW1 75 aa10.88□□□□□ -0.67
HPS3-206ENST00000486530 ABCA13Q86UQ4 5058 aa10.86□□□□□ -0.67
HPS3-206ENST00000486530 SPINK7P58062 85 aa10.85□□□□□ -0.67
HPS3-206ENST00000486530 PRO0628Q9UI54 55 aa10.85□□□□□ -0.67
HPS3-206ENST00000486530 ATP11AUNQ6ZP68 121 aa10.81□□□□□ -0.68
HPS3-206ENST00000486530 RPL37P61927 97 aaKnown RBP10.8□□□□□ -0.68
HPS3-206ENST00000486530 J3QL48 77 aa10.78□□□□□ -0.68
HPS3-206ENST00000486530 XP32Q5T750 250 aa10.78□□□□□ -0.68
HPS3-206ENST00000486530 A6NED7 52 aa10.68□□□□□ -0.7
HPS3-206ENST00000486530 KRTAP3-1Q9BYR8 98 aa10.68□□□□□ -0.7
HPS3-206ENST00000486530 COX6B2Q6YFQ2 88 aa10.65□□□□□ -0.7
HPS3-206ENST00000486530 A0A1B0GU69 56 aa10.64□□□□□ -0.71
HPS3-206ENST00000486530 SPTSSBQ8NFR3 76 aa10.64□□□□□ -0.71
HPS3-206ENST00000486530 TPRXLQ17RH7 258 aa10.63□□□□□ -0.71
HPS3-206ENST00000486530 PCLOQ9Y6V0 5065 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms