RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 FAM236CP0DP71 79 aa10.43□□□□□ -0.74
LMBR1-217ENST00000485985 A0A1B0GVX0 72 aa10.42□□□□□ -0.74
LMBR1-217ENST00000485985 MT2AP02795 61 aa10.42□□□□□ -0.74
LMBR1-217ENST00000485985 RBM3P98179 157 aaKnown RBP10.42□□□□□ -0.74
LMBR1-217ENST00000485985 SCGB1C2P0DMR2 95 aa10.41□□□□□ -0.74
LMBR1-217ENST00000485985 FCGBPQ9Y6R7 5405 aaPredicted RBP10.39□□□□□ -0.75
LMBR1-217ENST00000485985 DSCR8Q96T75 97 aa10.39□□□□□ -0.75
LMBR1-217ENST00000485985 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
LMBR1-217ENST00000485985 SMIM6P0DI80 62 aa10.38□□□□□ -0.75
LMBR1-217ENST00000485985 RBM12B-AS1Q9P1G2 102 aa10.37□□□□□ -0.75
LMBR1-217ENST00000485985 LCE2BO14633 110 aa10.35□□□□□ -0.75
LMBR1-217ENST00000485985 BAALC-AS2P0C853 105 aa10.35□□□□□ -0.75
LMBR1-217ENST00000485985 KRTAP19-1Q8IUB9 90 aa10.35□□□□□ -0.75
LMBR1-217ENST00000485985 C9JAW5 83 aa10.33□□□□□ -0.76
LMBR1-217ENST00000485985 MT1FP04733 61 aa10.33□□□□□ -0.76
LMBR1-217ENST00000485985 Q6ZQT0 140 aa10.32□□□□□ -0.76
LMBR1-217ENST00000485985 LOC105371267A0A1B0GV96 52 aa10.31□□□□□ -0.76
LMBR1-217ENST00000485985 J3KT08 172 aa10.3□□□□□ -0.76
LMBR1-217ENST00000485985 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
LMBR1-217ENST00000485985 KRTAP9-3Q9BYQ3 159 aa10.3□□□□□ -0.76
LMBR1-217ENST00000485985 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
LMBR1-217ENST00000485985 C21orf62-AS1Q17RA5 79 aa10.27□□□□□ -0.77
LMBR1-217ENST00000485985 KRTAP10-10P60014 251 aa10.26□□□□□ -0.77
LMBR1-217ENST00000485985 Q8N9P0 234 aaPredicted RBP10.24□□□□□ -0.77
LMBR1-217ENST00000485985 SPINK7P58062 85 aa10.23□□□□□ -0.77
LMBR1-217ENST00000485985 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
LMBR1-217ENST00000485985 LOC110117498A0A087WWA1 95 aa10.22□□□□□ -0.77
LMBR1-217ENST00000485985 MACF1Q9UPN3 7388 aaKnown RBP10.21□□□□□ -0.77
LMBR1-217ENST00000485985 TSTD3H0UI37 97 aa10.21□□□□□ -0.77
LMBR1-217ENST00000485985 M0R143 59 aa10.21□□□□□ -0.77
LMBR1-217ENST00000485985 A8MWP4 228 aa10.2□□□□□ -0.78
LMBR1-217ENST00000485985 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
LMBR1-217ENST00000485985 NDUFB1O75438 58 aa10.2□□□□□ -0.78
LMBR1-217ENST00000485985 C8orf17Q9NRJ1 99 aa10.2□□□□□ -0.78
LMBR1-217ENST00000485985 IGKV3D-7A0A0C4DH55 119 aa10.18□□□□□ -0.78
LMBR1-217ENST00000485985 SYNE2Q8WXH0 6885 aaKnown RBP10.17□□□□□ -0.78
LMBR1-217ENST00000485985 MTURNQ8N3F0 131 aa10.17□□□□□ -0.78
LMBR1-217ENST00000485985 C14orf132Q9NPU4 83 aa10.17□□□□□ -0.78
LMBR1-217ENST00000485985 A0A1B0GW54 56 aa10.15□□□□□ -0.78
LMBR1-217ENST00000485985 PDE6GP18545 87 aa10.12□□□□□ -0.79
LMBR1-217ENST00000485985 WFDC13Q8IUB5 93 aa10.12□□□□□ -0.79
LMBR1-217ENST00000485985 Q6ZVQ6 151 aa10.11□□□□□ -0.79
LMBR1-217ENST00000485985 LYRM7Q5U5X0 104 aa10.09□□□□□ -0.79
LMBR1-217ENST00000485985 PRR15Q8IV56 129 aa10.09□□□□□ -0.79
LMBR1-217ENST00000485985 LINC00846Q9NV44 126 aa10.08□□□□□ -0.8
LMBR1-217ENST00000485985 MMP24-AS1A0A0U1RRL7 71 aa10.06□□□□□ -0.8
LMBR1-217ENST00000485985 KRTAP19-6Q3LI70 58 aa10.06□□□□□ -0.8
LMBR1-217ENST00000485985 NREPQ16612 68 aa10.04□□□□□ -0.8
LMBR1-217ENST00000485985 TMEM254Q8TBM7 123 aa10.02□□□□□ -0.81
LMBR1-217ENST00000485985 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
LMBR1-217ENST00000485985 K7EQZ3 153 aa10□□□□□ -0.81
LMBR1-217ENST00000485985 BATFQ16520 125 aa10□□□□□ -0.81
LMBR1-217ENST00000485985 hDV103S1A0JD37 113 aa9.95□□□□□ -0.82
LMBR1-217ENST00000485985 H3BT86 120 aa9.94□□□□□ -0.82
LMBR1-217ENST00000485985 C9orf118A6NHY6 69 aa9.91□□□□□ -0.82
LMBR1-217ENST00000485985 NDUFS5O43920 106 aa9.91□□□□□ -0.82
LMBR1-217ENST00000485985 A0A1W2PPM0 123 aa9.89□□□□□ -0.83
LMBR1-217ENST00000485985 TAX1BP3O14907 124 aa9.89□□□□□ -0.83
LMBR1-217ENST00000485985 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
LMBR1-217ENST00000485985 PCP4L1A6NKN8 68 aa9.86□□□□□ -0.83
LMBR1-217ENST00000485985 BPY2O14599 106 aa9.86□□□□□ -0.83
LMBR1-217ENST00000485985 KRTAP6-3Q3LI67 103 aa9.86□□□□□ -0.83
LMBR1-217ENST00000485985 Q5W150 140 aa9.85□□□□□ -0.83
LMBR1-217ENST00000485985 IGKV2D-30A0A075B6S6 120 aa9.84□□□□□ -0.83
LMBR1-217ENST00000485985 IGKV2-30P06310 120 aa9.84□□□□□ -0.83
LMBR1-217ENST00000485985 Q8N9L7 120 aa9.83□□□□□ -0.84
LMBR1-217ENST00000485985 C7orf65Q6ZTY9 151 aa9.81□□□□□ -0.84
LMBR1-217ENST00000485985 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
LMBR1-217ENST00000485985 CASC2Q6XLA1 102 aa9.78□□□□□ -0.84
LMBR1-217ENST00000485985 HCG22E2RYF7 251 aa9.75□□□□□ -0.85
LMBR1-217ENST00000485985 SMCPP49901 116 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-217ENST00000485985 SPCS1Q9Y6A9 102 aa9.73□□□□□ -0.85
LMBR1-217ENST00000485985 C4orf26Q17RF5 130 aa9.7□□□□□ -0.86
LMBR1-217ENST00000485985 CXCL6P80162 114 aa9.66□□□□□ -0.86
LMBR1-217ENST00000485985 PRO0461Q9UI25 63 aa9.63□□□□□ -0.87
LMBR1-217ENST00000485985 UBL5Q9BZL1 73 aa9.59□□□□□ -0.87
LMBR1-217ENST00000485985 NEBP20929 6669 aa9.59□□□□□ -0.87
LMBR1-217ENST00000485985 KRTAP3-1Q9BYR8 98 aa9.58□□□□□ -0.88
LMBR1-217ENST00000485985 C5orf47Q569G3 176 aa9.57□□□□□ -0.88
LMBR1-217ENST00000485985 GTF2H5Q6ZYL4 71 aa9.56□□□□□ -0.88
LMBR1-217ENST00000485985 K7EP34 96 aa9.55□□□□□ -0.88
LMBR1-217ENST00000485985 S4R3F8 94 aa9.5□□□□□ -0.89
LMBR1-217ENST00000485985 C1orf64Q8NEQ6 169 aa9.48□□□□□ -0.89
LMBR1-217ENST00000485985 FAM236AA0A1B0GUQ0 79 aa9.47□□□□□ -0.89
LMBR1-217ENST00000485985 FAM236BA0A1B0GV22 79 aa9.47□□□□□ -0.89
LMBR1-217ENST00000485985 LCA10Q71F78 164 aa9.46□□□□□ -0.9
LMBR1-217ENST00000485985 A6NN06 94 aa9.43□□□□□ -0.9
LMBR1-217ENST00000485985 MT1BP07438 61 aa9.43□□□□□ -0.9
LMBR1-217ENST00000485985 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
LMBR1-217ENST00000485985 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
LMBR1-217ENST00000485985 F8W1H4 67 aa9.4□□□□□ -0.9
LMBR1-217ENST00000485985 MUC12Q9UKN1 5478 aa9.38□□□□□ -0.91
LMBR1-217ENST00000485985 SPRR2GQ9BYE4 73 aa9.38□□□□□ -0.91
LMBR1-217ENST00000485985 KRTAP19-8Q3LI54 63 aa9.36□□□□□ -0.91
LMBR1-217ENST00000485985 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
LMBR1-217ENST00000485985 Q5VV11 94 aa9.34□□□□□ -0.91
LMBR1-217ENST00000485985 KRTAP20-1Q3LI63 56 aa9.33□□□□□ -0.92
LMBR1-217ENST00000485985 CYP4F30PQ9H0H9 118 aa9.3□□□□□ -0.92
LMBR1-217ENST00000485985 A0A1B0GV90 55 aa9.29□□□□□ -0.92
LMBR1-217ENST00000485985 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms