RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TNXBP22105 4242 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 HCG22E2RYF7 251 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 K7EQZ3 153 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 NDUFC1O43677 76 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 OXTP01178 125 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 CD164Q04900 197 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 KLKP1Q107X0 134 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 LINC00472Q9H8W2 130 aa6.55□□□□□ -1.36
SND1-212ENST00000485871 A8MWP4 228 aa6.54□□□□□ -1.36
SND1-212ENST00000485871 NDUFB1O75438 58 aa6.54□□□□□ -1.36
SND1-212ENST00000485871 OCR1Q9BZK8 76 aa6.54□□□□□ -1.36
SND1-212ENST00000485871 C20orf197Q8N268 126 aa6.53□□□□□ -1.36
SND1-212ENST00000485871 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
SND1-212ENST00000485871 HRCT1Q6UXD1 115 aa6.51□□□□□ -1.37
SND1-212ENST00000485871 LINC00304Q8N9R0 145 aa6.51□□□□□ -1.37
SND1-212ENST00000485871 Q5XG85 94 aa6.49□□□□□ -1.37
SND1-212ENST00000485871 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
SND1-212ENST00000485871 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
SND1-212ENST00000485871 SPINK1P00995 79 aa6.48□□□□□ -1.37
SND1-212ENST00000485871 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
SND1-212ENST00000485871 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
SND1-212ENST00000485871 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
SND1-212ENST00000485871 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
SND1-212ENST00000485871 CASC2Q6XLA1 102 aa6.47□□□□□ -1.37
SND1-212ENST00000485871 DEFB116Q30KQ4 102 aa6.46□□□□□ -1.38
SND1-212ENST00000485871 Q96NJ1 140 aa6.46□□□□□ -1.38
SND1-212ENST00000485871 RNF213Q63HN8 5207 aa6.46□□□□□ -1.38
SND1-212ENST00000485871 A0A0U1RQV1 116 aa6.45□□□□□ -1.38
SND1-212ENST00000485871 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
SND1-212ENST00000485871 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
SND1-212ENST00000485871 H3BPC8 53 aa6.44□□□□□ -1.38
SND1-212ENST00000485871 H7BZZ5 65 aa6.44□□□□□ -1.38
SND1-212ENST00000485871 WFDC13Q8IUB5 93 aa6.43□□□□□ -1.38
SND1-212ENST00000485871 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
SND1-212ENST00000485871 LRP2P98164 4655 aa6.43□□□□□ -1.38
SND1-212ENST00000485871 FAM236DA0A1B0GTK5 79 aa6.42□□□□□ -1.38
SND1-212ENST00000485871 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
SND1-212ENST00000485871 FAM236CP0DP71 79 aa6.42□□□□□ -1.38
SND1-212ENST00000485871 MP68P56378 58 aa6.42□□□□□ -1.38
SND1-212ENST00000485871 LIMD2Q9BT23 127 aa6.42□□□□□ -1.38
SND1-212ENST00000485871 SNURFQ9Y675 71 aa6.42□□□□□ -1.38
SND1-212ENST00000485871 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
SND1-212ENST00000485871 hDV103S1A0JD37 113 aa6.41□□□□□ -1.38
SND1-212ENST00000485871 TP53AIP1Q9HCN2 124 aa6.41□□□□□ -1.38
SND1-212ENST00000485871 C1orf195Q5TG92 126 aa6.4□□□□□ -1.38
SND1-212ENST00000485871 C8orf17Q9NRJ1 99 aa6.39□□□□□ -1.39
SND1-212ENST00000485871 C8orf87E5RJ46 101 aa6.38□□□□□ -1.39
SND1-212ENST00000485871 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
SND1-212ENST00000485871 IGHV6-1A0A0B4J1U7 121 aa6.35□□□□□ -1.39
SND1-212ENST00000485871 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
SND1-212ENST00000485871 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
SND1-212ENST00000485871 H0Y9P7 68 aa6.34□□□□□ -1.39
SND1-212ENST00000485871 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.39
SND1-212ENST00000485871 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.39
SND1-212ENST00000485871 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
SND1-212ENST00000485871 LINC00208Q96KT6 92 aa6.3□□□□□ -1.4
SND1-212ENST00000485871 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
SND1-212ENST00000485871 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
SND1-212ENST00000485871 NDUFS5O43920 106 aa6.27□□□□□ -1.41
SND1-212ENST00000485871 C1orf64Q8NEQ6 169 aa6.27□□□□□ -1.41
SND1-212ENST00000485871 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
SND1-212ENST00000485871 LINC00313P59037 77 aa6.26□□□□□ -1.41
SND1-212ENST00000485871 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
SND1-212ENST00000485871 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
SND1-212ENST00000485871 IGLV7-46A0A075B6I9 117 aa6.23□□□□□ -1.41
SND1-212ENST00000485871 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
SND1-212ENST00000485871 LOC101927531A0A1B0GV80 90 aa6.22□□□□□ -1.41
SND1-212ENST00000485871 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
SND1-212ENST00000485871 PRR4Q16378 134 aa6.21□□□□□ -1.42
SND1-212ENST00000485871 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
SND1-212ENST00000485871 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.42
SND1-212ENST00000485871 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
SND1-212ENST00000485871 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
SND1-212ENST00000485871 XP32Q5T750 250 aa6.13□□□□□ -1.43
SND1-212ENST00000485871 A8MUU9 505 aa6.12□□□□□ -1.43
SND1-212ENST00000485871 C20orf166-AS1Q96NR2 134 aa6.12□□□□□ -1.43
SND1-212ENST00000485871 LPAP08519 4548 aa6.1□□□□□ -1.43
SND1-212ENST00000485871 Q5W150 140 aa6.1□□□□□ -1.43
SND1-212ENST00000485871 PCOTHQ58A44 107 aa6.09□□□□□ -1.43
SND1-212ENST00000485871 Q75L30 129 aa6.09□□□□□ -1.43
SND1-212ENST00000485871 V9GYY9 64 aa6.08□□□□□ -1.44
SND1-212ENST00000485871 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
SND1-212ENST00000485871 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
SND1-212ENST00000485871 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
SND1-212ENST00000485871 Q1T7F1 81 aa6.04□□□□□ -1.44
SND1-212ENST00000485871 COA5Q86WW8 74 aa6.03□□□□□ -1.44
SND1-212ENST00000485871 MUC2Q02817 5179 aa6.02□□□□□ -1.45
SND1-212ENST00000485871 ACYP2P14621 99 aa6.01□□□□□ -1.45
SND1-212ENST00000485871 C4orf26Q17RF5 130 aa6□□□□□ -1.45
SND1-212ENST00000485871 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
SND1-212ENST00000485871 HRES1P13985 223 aa5.99□□□□□ -1.45
SND1-212ENST00000485871 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
SND1-212ENST00000485871 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
SND1-212ENST00000485871 MUC17Q685J3 4493 aa5.99□□□□□ -1.45
SND1-212ENST00000485871 MPLKIPQ8TAP9 179 aa5.98□□□□□ -1.45
SND1-212ENST00000485871 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
SND1-212ENST00000485871 A8MUN3 132 aa5.94□□□□□ -1.46
SND1-212ENST00000485871 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
SND1-212ENST00000485871 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
SND1-212ENST00000485871 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms