RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 Q6ZVQ6 151 aa10.75□□□□□ -0.69
COL6A2-208ENST00000485591 MUC17Q685J3 4493 aa10.74□□□□□ -0.69
COL6A2-208ENST00000485591 A8MWP4 228 aa10.74□□□□□ -0.69
COL6A2-208ENST00000485591 NDUFB1O75438 58 aa10.74□□□□□ -0.69
COL6A2-208ENST00000485591 LINC00313P59037 77 aa10.74□□□□□ -0.69
COL6A2-208ENST00000485591 LINC00846Q9NV44 126 aa10.74□□□□□ -0.69
COL6A2-208ENST00000485591 C8orf87E5RJ46 101 aa10.73□□□□□ -0.69
COL6A2-208ENST00000485591 NOTCH2NLQ7Z3S9 236 aa10.71□□□□□ -0.69
COL6A2-208ENST00000485591 UBL5Q9BZL1 73 aa10.71□□□□□ -0.69
COL6A2-208ENST00000485591 Q75L30 129 aa10.7□□□□□ -0.7
COL6A2-208ENST00000485591 IGKV3D-7A0A0C4DH55 119 aa10.69□□□□□ -0.7
COL6A2-208ENST00000485591 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
COL6A2-208ENST00000485591 BPY2O14599 106 aa10.69□□□□□ -0.7
COL6A2-208ENST00000485591 C20orf166-AS1Q96NR2 134 aa10.69□□□□□ -0.7
COL6A2-208ENST00000485591 RNF213Q63HN8 5207 aa10.68□□□□□ -0.7
COL6A2-208ENST00000485591 PRR15Q8IV56 129 aa10.67□□□□□ -0.7
COL6A2-208ENST00000485591 A8MUU9 505 aa10.66□□□□□ -0.7
COL6A2-208ENST00000485591 PCOTHQ58A44 107 aa10.66□□□□□ -0.7
COL6A2-208ENST00000485591 ACYP1P07311 99 aa10.64□□□□□ -0.71
COL6A2-208ENST00000485591 FAM240AA0A1B0GVK7 77 aa10.63□□□□□ -0.71
COL6A2-208ENST00000485591 K7EQZ3 153 aa10.63□□□□□ -0.71
COL6A2-208ENST00000485591 C8orf17Q9NRJ1 99 aa10.63□□□□□ -0.71
COL6A2-208ENST00000485591 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
COL6A2-208ENST00000485591 MMP24-AS1A0A0U1RRL7 71 aa10.57□□□□□ -0.72
COL6A2-208ENST00000485591 KRTAP4-1Q9BYQ7 146 aa10.57□□□□□ -0.72
COL6A2-208ENST00000485591 Q8N9L7 120 aa10.55□□□□□ -0.72
COL6A2-208ENST00000485591 CXCL6P80162 114 aa10.53□□□□□ -0.72
COL6A2-208ENST00000485591 Q8N9P0 234 aaPredicted RBP10.52□□□□□ -0.73
COL6A2-208ENST00000485591 MUC2Q02817 5179 aa10.52□□□□□ -0.73
COL6A2-208ENST00000485591 TMEM254Q8TBM7 123 aa10.51□□□□□ -0.73
COL6A2-208ENST00000485591 hDV103S1A0JD37 113 aa10.49□□□□□ -0.73
COL6A2-208ENST00000485591 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
COL6A2-208ENST00000485591 J3QR89 54 aa10.47□□□□□ -0.73
COL6A2-208ENST00000485591 ATP5EP2Q5VTU8 51 aa10.45□□□□□ -0.74
COL6A2-208ENST00000485591 A0A0U1RQV1 116 aa10.43□□□□□ -0.74
COL6A2-208ENST00000485591 CASC2Q6XLA1 102 aa10.43□□□□□ -0.74
COL6A2-208ENST00000485591 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
COL6A2-208ENST00000485591 HCG22E2RYF7 251 aa10.41□□□□□ -0.74
COL6A2-208ENST00000485591 ZCCHC13Q8WW36 166 aaKnown RBP10.41□□□□□ -0.74
COL6A2-208ENST00000485591 LINC00643Q86TS7 51 aa10.4□□□□□ -0.74
COL6A2-208ENST00000485591 NDUFS5O43920 106 aa10.36□□□□□ -0.75
COL6A2-208ENST00000485591 K7ERU9 68 aa10.3□□□□□ -0.76
COL6A2-208ENST00000485591 HIST1H4AP62805 103 aaKnown RBP10.29□□□□□ -0.76
COL6A2-208ENST00000485591 KRTAP19-2Q3LHN2 52 aa10.28□□□□□ -0.76
COL6A2-208ENST00000485591 FAT4Q6V0I7 4981 aa10.24□□□□□ -0.77
COL6A2-208ENST00000485591 Q5W150 140 aa10.22□□□□□ -0.77
COL6A2-208ENST00000485591 SPINK7P58062 85 aa10.21□□□□□ -0.77
COL6A2-208ENST00000485591 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
COL6A2-208ENST00000485591 A0A087WVE0 104 aa10.2□□□□□ -0.78
COL6A2-208ENST00000485591 TP53AIP1Q9HCN2 124 aa10.2□□□□□ -0.78
COL6A2-208ENST00000485591 HRES1P13985 223 aa10.18□□□□□ -0.78
COL6A2-208ENST00000485591 LCE2AQ5TA79 106 aaPredicted RBP10.16□□□□□ -0.78
COL6A2-208ENST00000485591 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
COL6A2-208ENST00000485591 MPLKIPQ8TAP9 179 aa10.14□□□□□ -0.79
COL6A2-208ENST00000485591 C7orf65Q6ZTY9 151 aa10.1□□□□□ -0.79
COL6A2-208ENST00000485591 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
COL6A2-208ENST00000485591 IGKV2D-30A0A075B6S6 120 aa10.09□□□□□ -0.79
COL6A2-208ENST00000485591 IGKV2-30P06310 120 aa10.09□□□□□ -0.79
COL6A2-208ENST00000485591 IMUPQ9GZP8 106 aa10.07□□□□□ -0.8
COL6A2-208ENST00000485591 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
COL6A2-208ENST00000485591 MT1HP80294 61 aa10.06□□□□□ -0.8
COL6A2-208ENST00000485591 TRAV22A0A0B4J277 110 aa10.03□□□□□ -0.8
COL6A2-208ENST00000485591 FAM236DA0A1B0GTK5 79 aa10.03□□□□□ -0.8
COL6A2-208ENST00000485591 UQCRQO14949 82 aa10.03□□□□□ -0.8
COL6A2-208ENST00000485591 FAM236CP0DP71 79 aa10.03□□□□□ -0.8
COL6A2-208ENST00000485591 OCR1Q9BZK8 76 aa9.98□□□□□ -0.81
COL6A2-208ENST00000485591 H0Y9P7 68 aa9.93□□□□□ -0.82
COL6A2-208ENST00000485591 ATOX1O00244 68 aa9.93□□□□□ -0.82
COL6A2-208ENST00000485591 LOC101927531A0A1B0GV80 90 aa9.92□□□□□ -0.82
COL6A2-208ENST00000485591 SCGB1A1P11684 91 aa9.92□□□□□ -0.82
COL6A2-208ENST00000485591 FLGP20930 4061 aaPredicted RBP9.92□□□□□ -0.82
COL6A2-208ENST00000485591 CYP4F30PQ9H0H9 118 aa9.9□□□□□ -0.82
COL6A2-208ENST00000485591 M0R2T5 61 aa9.89□□□□□ -0.83
COL6A2-208ENST00000485591 FAM236AA0A1B0GUQ0 79 aa9.87□□□□□ -0.83
COL6A2-208ENST00000485591 FAM236BA0A1B0GV22 79 aa9.87□□□□□ -0.83
COL6A2-208ENST00000485591 C4orf26Q17RF5 130 aa9.87□□□□□ -0.83
COL6A2-208ENST00000485591 C5orf47Q569G3 176 aa9.85□□□□□ -0.83
COL6A2-208ENST00000485591 MP68P56378 58 aa9.84□□□□□ -0.83
COL6A2-208ENST00000485591 C1orf64Q8NEQ6 169 aa9.83□□□□□ -0.84
COL6A2-208ENST00000485591 LINC00208Q96KT6 92 aa9.81□□□□□ -0.84
COL6A2-208ENST00000485591 H1FX-AS1Q4G0G2 97 aa9.8□□□□□ -0.84
COL6A2-208ENST00000485591 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
COL6A2-208ENST00000485591 KRTAP10-6P60371 365 aaPredicted RBP9.79□□□□□ -0.84
COL6A2-208ENST00000485591 H3BPC8 53 aa9.78□□□□□ -0.84
COL6A2-208ENST00000485591 LORP23490 312 aaPredicted RBP9.77□□□□□ -0.85
COL6A2-208ENST00000485591 TRAV7A0A075B6U4 112 aa9.75□□□□□ -0.85
COL6A2-208ENST00000485591 KRTAP3-1Q9BYR8 98 aa9.73□□□□□ -0.85
COL6A2-208ENST00000485591 KLKP1Q107X0 134 aa9.69□□□□□ -0.86
COL6A2-208ENST00000485591 SERP2Q8N6R1 65 aa9.6□□□□□ -0.87
COL6A2-208ENST00000485591 KRTAP9-8Q9BYQ0 159 aa9.59□□□□□ -0.87
COL6A2-208ENST00000485591 S4R3F8 94 aa9.58□□□□□ -0.88
COL6A2-208ENST00000485591 A8MUN3 132 aa9.56□□□□□ -0.88
COL6A2-208ENST00000485591 LCA10Q71F78 164 aa9.52□□□□□ -0.89
COL6A2-208ENST00000485591 MT2AP02795 61 aa9.5□□□□□ -0.89
COL6A2-208ENST00000485591 SNURFQ9Y675 71 aa9.49□□□□□ -0.89
COL6A2-208ENST00000485591 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
COL6A2-208ENST00000485591 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
COL6A2-208ENST00000485591 DMAC1Q96GE9 116 aa9.46□□□□□ -0.9
COL6A2-208ENST00000485591 KRTAP9-2Q9BYQ4 174 aa9.45□□□□□ -0.9
COL6A2-208ENST00000485591 COX7CP15954 63 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms