RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
PCDH17-202ENST00000484979 Q75L30 129 aa9.38□□□□□ -0.91
PCDH17-202ENST00000484979 A0A087X002 238 aa9.37□□□□□ -0.91
PCDH17-202ENST00000484979 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
PCDH17-202ENST00000484979 LOC400499M0QZD8 3231 aa9.35□□□□□ -0.91
PCDH17-202ENST00000484979 ZANQ9Y493 2812 aa9.32□□□□□ -0.92
PCDH17-202ENST00000484979 NBEAQ8NFP9 2946 aa9.31□□□□□ -0.92
PCDH17-202ENST00000484979 DMXL1Q9Y485 3027 aa9.29□□□□□ -0.92
PCDH17-202ENST00000484979 RPS29P62273 56 aaKnown RBP9.25□□□□□ -0.93
PCDH17-202ENST00000484979 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
PCDH17-202ENST00000484979 TENM1Q9UKZ4 2725 aa9.23□□□□□ -0.93
PCDH17-202ENST00000484979 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
PCDH17-202ENST00000484979 NF1P21359 2839 aa9.23□□□□□ -0.93
PCDH17-202ENST00000484979 CFAP47Q6ZTR5 3102 aa9.21□□□□□ -0.94
PCDH17-202ENST00000484979 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
PCDH17-202ENST00000484979 M0QZ58 72 aa9.2□□□□□ -0.94
PCDH17-202ENST00000484979 ASPMQ8IZT6 3477 aa9.18□□□□□ -0.94
PCDH17-202ENST00000484979 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
PCDH17-202ENST00000484979 Q5VV11 94 aa9.14□□□□□ -0.95
PCDH17-202ENST00000484979 ZFHX4Q86UP3 3567 aa9.14□□□□□ -0.95
PCDH17-202ENST00000484979 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
PCDH17-202ENST00000484979 NOTCH2NLQ7Z3S9 236 aa9.11□□□□□ -0.95
PCDH17-202ENST00000484979 LAMA5O15230 3695 aa9.1□□□□□ -0.95
PCDH17-202ENST00000484979 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
PCDH17-202ENST00000484979 TENM2Q9NT68 2774 aa9.08□□□□□ -0.96
PCDH17-202ENST00000484979 H1FX-AS1Q4G0G2 97 aa9.08□□□□□ -0.96
PCDH17-202ENST00000484979 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
PCDH17-202ENST00000484979 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
PCDH17-202ENST00000484979 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
PCDH17-202ENST00000484979 PKD1L1Q8TDX9 2849 aa9.01□□□□□ -0.97
PCDH17-202ENST00000484979 SPENQ96T58 3664 aaKnown RBP9□□□□□ -0.97
PCDH17-202ENST00000484979 ROMO1P60602 79 aa8.98□□□□□ -0.97
PCDH17-202ENST00000484979 FBN2P35556 2912 aa8.97□□□□□ -0.97
PCDH17-202ENST00000484979 PRAC1Q96KF2 57 aa8.96□□□□□ -0.97
PCDH17-202ENST00000484979 DCHS1Q96JQ0 3298 aa8.95□□□□□ -0.98
PCDH17-202ENST00000484979 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
PCDH17-202ENST00000484979 SPATA8Q6RVD6 105 aa8.92□□□□□ -0.98
PCDH17-202ENST00000484979 SMG1Q96Q15 3661 aaKnown RBP8.9□□□□□ -0.98
PCDH17-202ENST00000484979 C20orf166-AS1Q96NR2 134 aa8.89□□□□□ -0.99
PCDH17-202ENST00000484979 BSNQ9UPA5 3926 aa8.88□□□□□ -0.99
PCDH17-202ENST00000484979 A8MUU9 505 aa8.87□□□□□ -0.99
PCDH17-202ENST00000484979 RELNP78509 3460 aa8.85□□□□□ -0.99
PCDH17-202ENST00000484979 HRNRQ86YZ3 2850 aaPredicted RBP8.82□□□□□ -1
PCDH17-202ENST00000484979 A0A0A0MQY5 61 aa8.77□□□□□ -1.01
PCDH17-202ENST00000484979 PDZD2O15018 2839 aa8.76□□□□□ -1.01
PCDH17-202ENST00000484979 VWFP04275 2813 aa8.73□□□□□ -1.01
PCDH17-202ENST00000484979 CELSR1Q9NYQ6 3014 aa8.72□□□□□ -1.01
PCDH17-202ENST00000484979 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
PCDH17-202ENST00000484979 SRRM2Q9UQ35 2752 aaKnown RBP8.7□□□□□ -1.02
PCDH17-202ENST00000484979 TGP01266 2768 aa8.69□□□□□ -1.02
PCDH17-202ENST00000484979 A8MU10 97 aa8.65□□□□□ -1.03
PCDH17-202ENST00000484979 XP32Q5T750 250 aa8.61□□□□□ -1.03
PCDH17-202ENST00000484979 CSMD1Q96PZ7 3565 aa8.6□□□□□ -1.03
PCDH17-202ENST00000484979 TPRXLQ17RH7 258 aa8.56□□□□□ -1.04
PCDH17-202ENST00000484979 A6NN06 94 aa8.56□□□□□ -1.04
PCDH17-202ENST00000484979 TNP1P09430 55 aa8.55□□□□□ -1.04
PCDH17-202ENST00000484979 H3BS24 57 aa8.54□□□□□ -1.04
PCDH17-202ENST00000484979 SVEP1Q4LDE5 3571 aa8.53□□□□□ -1.04
PCDH17-202ENST00000484979 KRTAP25-1Q3LHN0 102 aa8.44□□□□□ -1.06
PCDH17-202ENST00000484979 FBN1P35555 2871 aaKnown RBP8.44□□□□□ -1.06
PCDH17-202ENST00000484979 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
PCDH17-202ENST00000484979 KRTAP13-3Q3SY46 172 aa8.37□□□□□ -1.07
PCDH17-202ENST00000484979 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
PCDH17-202ENST00000484979 VPS13CQ709C8 3753 aa8.32□□□□□ -1.08
PCDH17-202ENST00000484979 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
PCDH17-202ENST00000484979 KRTAP10-10P60014 251 aa8.3□□□□□ -1.08
PCDH17-202ENST00000484979 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
PCDH17-202ENST00000484979 PP632Q6XCG6 107 aa8.27□□□□□ -1.08
PCDH17-202ENST00000484979 ZFHX3Q15911 3703 aa8.27□□□□□ -1.09
PCDH17-202ENST00000484979 OTOGQ6ZRI0 2925 aa8.25□□□□□ -1.09
PCDH17-202ENST00000484979 FBN3Q75N90 2809 aa8.21□□□□□ -1.09
PCDH17-202ENST00000484979 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
PCDH17-202ENST00000484979 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
PCDH17-202ENST00000484979 H0YAA0 97 aa8.08□□□□□ -1.12
PCDH17-202ENST00000484979 P0C880 135 aa8.08□□□□□ -1.12
PCDH17-202ENST00000484979 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
PCDH17-202ENST00000484979 COL7A1Q02388 2944 aa8.07□□□□□ -1.12
PCDH17-202ENST00000484979 ZNF469Q96JG9 3925 aaPredicted RBP8.01□□□□□ -1.13
PCDH17-202ENST00000484979 NBPF19A0A087WUL8 3843 aa8□□□□□ -1.13
PCDH17-202ENST00000484979 ANK3Q12955 4377 aaKnown RBP7.94□□□□□ -1.14
PCDH17-202ENST00000484979 MEGF8Q7Z7M0 2845 aa7.91□□□□□ -1.14
PCDH17-202ENST00000484979 CUBNO60494 3623 aa7.91□□□□□ -1.14
PCDH17-202ENST00000484979 AKAP9Q99996 3911 aa7.88□□□□□ -1.15
PCDH17-202ENST00000484979 TRRAPQ9Y4A5 3859 aa7.63□□□□□ -1.19
PCDH17-202ENST00000484979 KRTAP3-1Q9BYR8 98 aa7.62□□□□□ -1.19
PCDH17-202ENST00000484979 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
PCDH17-202ENST00000484979 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
PCDH17-202ENST00000484979 MT1HL1P0DM35 61 aa7.6□□□□□ -1.19
PCDH17-202ENST00000484979 KRTAP12-1P59990 96 aa7.58□□□□□ -1.2
PCDH17-202ENST00000484979 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.22
PCDH17-202ENST00000484979 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
PCDH17-202ENST00000484979 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
PCDH17-202ENST00000484979 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
PCDH17-202ENST00000484979 HUWE1Q7Z6Z7 4374 aaKnown RBP7.23□□□□□ -1.25
PCDH17-202ENST00000484979 ANK2Q01484 3957 aa7.21□□□□□ -1.26
PCDH17-202ENST00000484979 CMYA5Q8N3K9 4069 aa7.17□□□□□ -1.26
PCDH17-202ENST00000484979 DNAH3Q8TD57 4116 aa7.15□□□□□ -1.26
PCDH17-202ENST00000484979 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
PCDH17-202ENST00000484979 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
PCDH17-202ENST00000484979 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms