RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 C21orf62-AS1Q17RA5 79 aa10.08□□□□□ -0.8
ACTB-212ENST00000484841 J3KT08 172 aa10.06□□□□□ -0.8
ACTB-212ENST00000484841 C9JAW5 83 aa10.04□□□□□ -0.8
ACTB-212ENST00000484841 MPLKIPQ8TAP9 179 aa10.04□□□□□ -0.8
ACTB-212ENST00000484841 NDUFB1O75438 58 aa10.02□□□□□ -0.81
ACTB-212ENST00000484841 BAALC-AS2P0C853 105 aa10.02□□□□□ -0.81
ACTB-212ENST00000484841 MT2AP02795 61 aa10.01□□□□□ -0.81
ACTB-212ENST00000484841 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
ACTB-212ENST00000484841 KRTAP10-10P60014 251 aa9.98□□□□□ -0.81
ACTB-212ENST00000484841 LYRM7Q5U5X0 104 aa9.98□□□□□ -0.81
ACTB-212ENST00000484841 SPINK7P58062 85 aa9.95□□□□□ -0.82
ACTB-212ENST00000484841 Q6ZQT0 140 aa9.95□□□□□ -0.82
ACTB-212ENST00000484841 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.94□□□□□ -0.82
ACTB-212ENST00000484841 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
ACTB-212ENST00000484841 MT1FP04733 61 aa9.93□□□□□ -0.82
ACTB-212ENST00000484841 TMA7Q9Y2S6 64 aaKnown RBP9.93□□□□□ -0.82
ACTB-212ENST00000484841 ATXN8Q156A1 80 aa9.91□□□□□ -0.82
ACTB-212ENST00000484841 USH2AO75445 5202 aa9.89□□□□□ -0.83
ACTB-212ENST00000484841 A0A1B0GW54 56 aa9.89□□□□□ -0.83
ACTB-212ENST00000484841 KRTAP9-7A8MTY7 169 aa9.89□□□□□ -0.83
ACTB-212ENST00000484841 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
ACTB-212ENST00000484841 A8MWP4 228 aa9.88□□□□□ -0.83
ACTB-212ENST00000484841 M0R143 59 aa9.87□□□□□ -0.83
ACTB-212ENST00000484841 PDE6GP18545 87 aa9.87□□□□□ -0.83
ACTB-212ENST00000484841 C8orf17Q9NRJ1 99 aa9.87□□□□□ -0.83
ACTB-212ENST00000484841 LOC110117498A0A087WWA1 95 aa9.84□□□□□ -0.83
ACTB-212ENST00000484841 KRTAP9-3Q9BYQ3 159 aa9.84□□□□□ -0.83
ACTB-212ENST00000484841 LCE2BO14633 110 aa9.83□□□□□ -0.84
ACTB-212ENST00000484841 WFDC13Q8IUB5 93 aa9.83□□□□□ -0.84
ACTB-212ENST00000484841 NAA38Q9BRA0 125 aaKnown RBP9.82□□□□□ -0.84
ACTB-212ENST00000484841 Q6ZVQ6 151 aa9.81□□□□□ -0.84
ACTB-212ENST00000484841 SSPOA2VEC9 5147 aa9.81□□□□□ -0.84
ACTB-212ENST00000484841 IGKV3D-7A0A0C4DH55 119 aa9.8□□□□□ -0.84
ACTB-212ENST00000484841 KRTAP19-1Q8IUB9 90 aa9.8□□□□□ -0.84
ACTB-212ENST00000484841 NREPQ16612 68 aa9.79□□□□□ -0.84
ACTB-212ENST00000484841 C14orf132Q9NPU4 83 aa9.79□□□□□ -0.84
ACTB-212ENST00000484841 LINC00846Q9NV44 126 aa9.79□□□□□ -0.84
ACTB-212ENST00000484841 PRR15Q8IV56 129 aa9.75□□□□□ -0.85
ACTB-212ENST00000484841 MRPL34Q9BQ48 92 aaKnown RBP9.72□□□□□ -0.85
ACTB-212ENST00000484841 NDUFS5O43920 106 aa9.71□□□□□ -0.86
ACTB-212ENST00000484841 TMEM254Q8TBM7 123 aa9.71□□□□□ -0.86
ACTB-212ENST00000484841 MMP24-AS1A0A0U1RRL7 71 aa9.67□□□□□ -0.86
ACTB-212ENST00000484841 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
ACTB-212ENST00000484841 FCGBPQ9Y6R7 5405 aaPredicted RBP9.65□□□□□ -0.87
ACTB-212ENST00000484841 BATFQ16520 125 aa9.63□□□□□ -0.87
ACTB-212ENST00000484841 H1FX-AS1Q4G0G2 97 aa9.63□□□□□ -0.87
ACTB-212ENST00000484841 K7EQZ3 153 aa9.61□□□□□ -0.87
ACTB-212ENST00000484841 BPY2O14599 106 aa9.59□□□□□ -0.87
ACTB-212ENST00000484841 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
ACTB-212ENST00000484841 H3BT86 120 aa9.58□□□□□ -0.88
ACTB-212ENST00000484841 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
ACTB-212ENST00000484841 SMIM6P0DI80 62 aa9.58□□□□□ -0.88
ACTB-212ENST00000484841 TSTD3H0UI37 97 aa9.57□□□□□ -0.88
ACTB-212ENST00000484841 KRTAP19-6Q3LI70 58 aa9.55□□□□□ -0.88
ACTB-212ENST00000484841 C7orf65Q6ZTY9 151 aa9.55□□□□□ -0.88
ACTB-212ENST00000484841 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
ACTB-212ENST00000484841 CASC2Q6XLA1 102 aa9.49□□□□□ -0.89
ACTB-212ENST00000484841 A0A1W2PPM0 123 aa9.47□□□□□ -0.89
ACTB-212ENST00000484841 Q5W150 140 aa9.47□□□□□ -0.89
ACTB-212ENST00000484841 HCG22E2RYF7 251 aa9.46□□□□□ -0.9
ACTB-212ENST00000484841 MACF1Q9UPN3 7388 aaKnown RBP9.43□□□□□ -0.9
ACTB-212ENST00000484841 Q8N9L7 120 aa9.42□□□□□ -0.9
ACTB-212ENST00000484841 TAX1BP3O14907 124 aa9.41□□□□□ -0.9
ACTB-212ENST00000484841 CXCL6P80162 114 aa9.41□□□□□ -0.9
ACTB-212ENST00000484841 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
ACTB-212ENST00000484841 SYNE2Q8WXH0 6885 aaKnown RBP9.38□□□□□ -0.91
ACTB-212ENST00000484841 LOC105371267A0A1B0GV96 52 aa9.36□□□□□ -0.91
ACTB-212ENST00000484841 SPCS1Q9Y6A9 102 aa9.35□□□□□ -0.91
ACTB-212ENST00000484841 UBL5Q9BZL1 73 aa9.34□□□□□ -0.91
ACTB-212ENST00000484841 FAM236AA0A1B0GUQ0 79 aa9.33□□□□□ -0.92
ACTB-212ENST00000484841 FAM236BA0A1B0GV22 79 aa9.33□□□□□ -0.92
ACTB-212ENST00000484841 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
ACTB-212ENST00000484841 S4R3F8 94 aa9.27□□□□□ -0.93
ACTB-212ENST00000484841 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
ACTB-212ENST00000484841 KRTAP6-3Q3LI67 103 aa9.23□□□□□ -0.93
ACTB-212ENST00000484841 CSAG1Q6PB30 78 aa9.23□□□□□ -0.93
ACTB-212ENST00000484841 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
ACTB-212ENST00000484841 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
ACTB-212ENST00000484841 COL5A1-AS1Q5SY13 56 aa9.15□□□□□ -0.94
ACTB-212ENST00000484841 Q5VV11 94 aa9.15□□□□□ -0.94
ACTB-212ENST00000484841 LCA10Q71F78 164 aa9.15□□□□□ -0.94
ACTB-212ENST00000484841 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.94
ACTB-212ENST00000484841 A6NN06 94 aa9.14□□□□□ -0.95
ACTB-212ENST00000484841 K7EP34 96 aa9.12□□□□□ -0.95
ACTB-212ENST00000484841 PRO0461Q9UI25 63 aa9.12□□□□□ -0.95
ACTB-212ENST00000484841 SPRR2GQ9BYE4 73 aa9.06□□□□□ -0.96
ACTB-212ENST00000484841 MT1BP07438 61 aa9.04□□□□□ -0.96
ACTB-212ENST00000484841 GTF2H5Q6ZYL4 71 aa9.04□□□□□ -0.96
ACTB-212ENST00000484841 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
ACTB-212ENST00000484841 KRTAP19-8Q3LI54 63 aa9.02□□□□□ -0.97
ACTB-212ENST00000484841 CYP4F30PQ9H0H9 118 aa8.99□□□□□ -0.97
ACTB-212ENST00000484841 F8W1H4 67 aa8.98□□□□□ -0.97
ACTB-212ENST00000484841 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
ACTB-212ENST00000484841 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
ACTB-212ENST00000484841 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
ACTB-212ENST00000484841 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
ACTB-212ENST00000484841 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
ACTB-212ENST00000484841 KRTAP10-5P60370 271 aa8.92□□□□□ -0.98
ACTB-212ENST00000484841 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
ACTB-212ENST00000484841 PCP4L1A6NKN8 68 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms