RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 MPLKIPQ8TAP9 179 aa14.21□□□□□ -0.13
HLA-C-207ENST00000484378 BAALC-AS2P0C853 105 aa14.18□□□□□ -0.14
HLA-C-207ENST00000484378 C9JAW5 83 aa14.17□□□□□ -0.14
HLA-C-207ENST00000484378 C21orf62-AS1Q17RA5 79 aa14.16□□□□□ -0.14
HLA-C-207ENST00000484378 J3KT08 172 aa14.15□□□□□ -0.14
HLA-C-207ENST00000484378 MT2AP02795 61 aa14.11□□□□□ -0.15
HLA-C-207ENST00000484378 Q6ZQT0 140 aa14.1□□□□□ -0.15
HLA-C-207ENST00000484378 ZCCHC13Q8WW36 166 aaKnown RBP14.09□□□□□ -0.15
HLA-C-207ENST00000484378 USH2AO75445 5202 aa14.08□□□□□ -0.15
HLA-C-207ENST00000484378 NDUFB1O75438 58 aa14.05□□□□□ -0.16
HLA-C-207ENST00000484378 ATXN8Q156A1 80 aa14.04□□□□□ -0.16
HLA-C-207ENST00000484378 MTURNQ8N3F0 131 aa14.04□□□□□ -0.16
HLA-C-207ENST00000484378 NAA38Q9BRA0 125 aaKnown RBP14.02□□□□□ -0.17
HLA-C-207ENST00000484378 JMJD7-PLA2G4BH0Y9G9 81 aa14.01□□□□□ -0.17
HLA-C-207ENST00000484378 M0R143 59 aa14.01□□□□□ -0.17
HLA-C-207ENST00000484378 MT1FP04733 61 aa14□□□□□ -0.17
HLA-C-207ENST00000484378 SPINK7P58062 85 aa14□□□□□ -0.17
HLA-C-207ENST00000484378 SSPOA2VEC9 5147 aa13.98□□□□□ -0.17
HLA-C-207ENST00000484378 LOC110117498A0A087WWA1 95 aa13.97□□□□□ -0.17
HLA-C-207ENST00000484378 Q8N9P0 234 aaPredicted RBP13.97□□□□□ -0.17
HLA-C-207ENST00000484378 A8MWP4 228 aa13.96□□□□□ -0.17
HLA-C-207ENST00000484378 A0A1B0GW54 56 aa13.95□□□□□ -0.18
HLA-C-207ENST00000484378 KRTAP10-10P60014 251 aa13.95□□□□□ -0.18
HLA-C-207ENST00000484378 C8orf17Q9NRJ1 99 aa13.95□□□□□ -0.18
HLA-C-207ENST00000484378 LYRM7Q5U5X0 104 aa13.93□□□□□ -0.18
HLA-C-207ENST00000484378 PDE6GP18545 87 aa13.92□□□□□ -0.18
HLA-C-207ENST00000484378 IGKV3D-7A0A0C4DH55 119 aa13.89□□□□□ -0.19
HLA-C-207ENST00000484378 C14orf132Q9NPU4 83 aa13.89□□□□□ -0.19
HLA-C-207ENST00000484378 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.87□□□□□ -0.19
HLA-C-207ENST00000484378 KRTAP9-3Q9BYQ3 159 aa13.86□□□□□ -0.19
HLA-C-207ENST00000484378 LCE2BO14633 110 aa13.85□□□□□ -0.19
HLA-C-207ENST00000484378 WFDC13Q8IUB5 93 aa13.85□□□□□ -0.19
HLA-C-207ENST00000484378 Q6ZVQ6 151 aa13.84□□□□□ -0.19
HLA-C-207ENST00000484378 NREPQ16612 68 aa13.8□□□□□ -0.2
HLA-C-207ENST00000484378 PRR15Q8IV56 129 aa13.8□□□□□ -0.2
HLA-C-207ENST00000484378 KRTAP9-7A8MTY7 169 aa13.77□□□□□ -0.21
HLA-C-207ENST00000484378 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
HLA-C-207ENST00000484378 FCGBPQ9Y6R7 5405 aaPredicted RBP13.74□□□□□ -0.21
HLA-C-207ENST00000484378 KRTAP19-1Q8IUB9 90 aa13.73□□□□□ -0.21
HLA-C-207ENST00000484378 MMP24-AS1A0A0U1RRL7 71 aa13.71□□□□□ -0.21
HLA-C-207ENST00000484378 BATFQ16520 125 aa13.71□□□□□ -0.21
HLA-C-207ENST00000484378 TMEM254Q8TBM7 123 aa13.71□□□□□ -0.21
HLA-C-207ENST00000484378 MRPL34Q9BQ48 92 aaKnown RBP13.71□□□□□ -0.21
HLA-C-207ENST00000484378 TSTD3H0UI37 97 aa13.64□□□□□ -0.23
HLA-C-207ENST00000484378 K7EQZ3 153 aa13.64□□□□□ -0.23
HLA-C-207ENST00000484378 hDV103S1A0JD37 113 aa13.63□□□□□ -0.23
HLA-C-207ENST00000484378 NDUFS5O43920 106 aa13.62□□□□□ -0.23
HLA-C-207ENST00000484378 H3BT86 120 aa13.6□□□□□ -0.23
HLA-C-207ENST00000484378 C9orf118A6NHY6 69 aa13.55□□□□□ -0.24
HLA-C-207ENST00000484378 BPY2O14599 106 aa13.53□□□□□ -0.24
HLA-C-207ENST00000484378 H1FX-AS1Q4G0G2 97 aa13.53□□□□□ -0.24
HLA-C-207ENST00000484378 A0A1W2PPM0 123 aa13.51□□□□□ -0.25
HLA-C-207ENST00000484378 IGKV2D-30A0A075B6S6 120 aa13.49□□□□□ -0.25
HLA-C-207ENST00000484378 IGKV2-30P06310 120 aa13.49□□□□□ -0.25
HLA-C-207ENST00000484378 TAX1BP3O14907 124 aa13.48□□□□□ -0.25
HLA-C-207ENST00000484378 LINC00846Q9NV44 126 aa13.47□□□□□ -0.25
HLA-C-207ENST00000484378 C7orf65Q6ZTY9 151 aa13.45□□□□□ -0.26
HLA-C-207ENST00000484378 Q5W150 140 aa13.42□□□□□ -0.26
HLA-C-207ENST00000484378 KRTAP19-6Q3LI70 58 aa13.41□□□□□ -0.26
HLA-C-207ENST00000484378 Q8N9L7 120 aa13.41□□□□□ -0.26
HLA-C-207ENST00000484378 CASC2Q6XLA1 102 aa13.39□□□□□ -0.27
HLA-C-207ENST00000484378 MACF1Q9UPN3 7388 aaKnown RBP13.36□□□□□ -0.27
HLA-C-207ENST00000484378 HCG22E2RYF7 251 aa13.35□□□□□ -0.27
HLA-C-207ENST00000484378 SPCS1Q9Y6A9 102 aa13.32□□□□□ -0.28
HLA-C-207ENST00000484378 CXCL6P80162 114 aa13.26□□□□□ -0.29
HLA-C-207ENST00000484378 C4orf26Q17RF5 130 aa13.26□□□□□ -0.29
HLA-C-207ENST00000484378 LOC105371267A0A1B0GV96 52 aa13.24□□□□□ -0.29
HLA-C-207ENST00000484378 SMCPP49901 116 aaPredicted RBP13.23□□□□□ -0.29
HLA-C-207ENST00000484378 SYNE2Q8WXH0 6885 aaKnown RBP13.22□□□□□ -0.29
HLA-C-207ENST00000484378 UBL5Q9BZL1 73 aa13.2□□□□□ -0.3
HLA-C-207ENST00000484378 C5orf47Q569G3 176 aa13.1□□□□□ -0.31
HLA-C-207ENST00000484378 PRO0461Q9UI25 63 aa13.09□□□□□ -0.31
HLA-C-207ENST00000484378 COL5A1-AS1Q5SY13 56 aa13.07□□□□□ -0.32
HLA-C-207ENST00000484378 K7EP34 96 aa13.03□□□□□ -0.32
HLA-C-207ENST00000484378 FAM236AA0A1B0GUQ0 79 aa13.02□□□□□ -0.33
HLA-C-207ENST00000484378 FAM236BA0A1B0GV22 79 aa13.02□□□□□ -0.33
HLA-C-207ENST00000484378 S4R3F8 94 aa13.02□□□□□ -0.33
HLA-C-207ENST00000484378 KRTAP3-1Q9BYR8 98 aa13.01□□□□□ -0.33
HLA-C-207ENST00000484378 C1orf64Q8NEQ6 169 aa12.98□□□□□ -0.33
HLA-C-207ENST00000484378 TP53AIP1Q9HCN2 124 aa12.94□□□□□ -0.34
HLA-C-207ENST00000484378 CSAG1Q6PB30 78 aa12.93□□□□□ -0.34
HLA-C-207ENST00000484378 LCA10Q71F78 164 aa12.91□□□□□ -0.34
HLA-C-207ENST00000484378 KRTAP6-3Q3LI67 103 aa12.88□□□□□ -0.35
HLA-C-207ENST00000484378 GTF2H5Q6ZYL4 71 aa12.84□□□□□ -0.35
HLA-C-207ENST00000484378 Q5VV11 94 aa12.8□□□□□ -0.36
HLA-C-207ENST00000484378 MT1BP07438 61 aa12.78□□□□□ -0.36
HLA-C-207ENST00000484378 F8W1H4 67 aa12.77□□□□□ -0.37
HLA-C-207ENST00000484378 ETDBQ3ZM63 59 aa12.77□□□□□ -0.37
HLA-C-207ENST00000484378 SPRR2GQ9BYE4 73 aa12.77□□□□□ -0.37
HLA-C-207ENST00000484378 A6NN06 94 aa12.76□□□□□ -0.37
HLA-C-207ENST00000484378 KRTAP19-8Q3LI54 63 aa12.72□□□□□ -0.37
HLA-C-207ENST00000484378 CYP4F30PQ9H0H9 118 aa12.71□□□□□ -0.37
HLA-C-207ENST00000484378 KLKP1Q107X0 134 aa12.69□□□□□ -0.38
HLA-C-207ENST00000484378 KRTAP3-3Q9BYR6 98 aa12.66□□□□□ -0.38
HLA-C-207ENST00000484378 TRAV22A0A0B4J277 110 aa12.65□□□□□ -0.38
HLA-C-207ENST00000484378 LOC101927531A0A1B0GV80 90 aa12.61□□□□□ -0.39
HLA-C-207ENST00000484378 A0A087WVE0 104 aa12.57□□□□□ -0.4
HLA-C-207ENST00000484378 PCP4L1A6NKN8 68 aa12.56□□□□□ -0.4
HLA-C-207ENST00000484378 KRTAP10-5P60370 271 aa12.54□□□□□ -0.4
HLA-C-207ENST00000484378 ACYP1P07311 99 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms