RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 XP32Q5T750 250 aa9.77□□□□□ -0.84
CPNE1-224ENST00000483359 NREPQ16612 68 aa9.75□□□□□ -0.85
CPNE1-224ENST00000483359 RNF213Q63HN8 5207 aa9.71□□□□□ -0.85
CPNE1-224ENST00000483359 DSCR10P59022 87 aa9.7□□□□□ -0.86
CPNE1-224ENST00000483359 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
CPNE1-224ENST00000483359 CCDC179H3BU77 68 aa9.7□□□□□ -0.86
CPNE1-224ENST00000483359 J3KT08 172 aa9.69□□□□□ -0.86
CPNE1-224ENST00000483359 LINC00846Q9NV44 126 aa9.68□□□□□ -0.86
CPNE1-224ENST00000483359 Q6ZVQ6 151 aa9.68□□□□□ -0.86
CPNE1-224ENST00000483359 C5orf47Q569G3 176 aa9.66□□□□□ -0.86
CPNE1-224ENST00000483359 MUC17Q685J3 4493 aa9.66□□□□□ -0.86
CPNE1-224ENST00000483359 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
CPNE1-224ENST00000483359 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
CPNE1-224ENST00000483359 MUC2Q02817 5179 aa9.64□□□□□ -0.87
CPNE1-224ENST00000483359 LINC00313P59037 77 aa9.64□□□□□ -0.87
CPNE1-224ENST00000483359 A8MWP4 228 aa9.63□□□□□ -0.87
CPNE1-224ENST00000483359 UBL5Q9BZL1 73 aa9.63□□□□□ -0.87
CPNE1-224ENST00000483359 NDUFB1O75438 58 aa9.63□□□□□ -0.87
CPNE1-224ENST00000483359 BPY2O14599 106 aa9.62□□□□□ -0.87
CPNE1-224ENST00000483359 IGKV3D-7A0A0C4DH55 119 aa9.61□□□□□ -0.87
CPNE1-224ENST00000483359 SEC61BP60468 96 aaKnown RBP9.6□□□□□ -0.87
CPNE1-224ENST00000483359 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
CPNE1-224ENST00000483359 K7EQZ3 153 aa9.58□□□□□ -0.88
CPNE1-224ENST00000483359 PCOTHQ58A44 107 aa9.57□□□□□ -0.88
CPNE1-224ENST00000483359 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
CPNE1-224ENST00000483359 C8orf87E5RJ46 101 aa9.57□□□□□ -0.88
CPNE1-224ENST00000483359 PRR15Q8IV56 129 aa9.56□□□□□ -0.88
CPNE1-224ENST00000483359 Q8N9L7 120 aa9.56□□□□□ -0.88
CPNE1-224ENST00000483359 Q75L30 129 aa9.54□□□□□ -0.88
CPNE1-224ENST00000483359 C8orf17Q9NRJ1 99 aa9.54□□□□□ -0.88
CPNE1-224ENST00000483359 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
CPNE1-224ENST00000483359 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
CPNE1-224ENST00000483359 IMUPQ9GZP8 106 aa9.53□□□□□ -0.88
CPNE1-224ENST00000483359 ACYP1P07311 99 aa9.52□□□□□ -0.89
CPNE1-224ENST00000483359 A8MUU9 505 aa9.52□□□□□ -0.89
CPNE1-224ENST00000483359 RPS28P62857 69 aaKnown RBP9.49□□□□□ -0.89
CPNE1-224ENST00000483359 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
CPNE1-224ENST00000483359 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
CPNE1-224ENST00000483359 KRTAP4-1Q9BYQ7 146 aa9.48□□□□□ -0.89
CPNE1-224ENST00000483359 UQCRQO14949 82 aa9.47□□□□□ -0.89
CPNE1-224ENST00000483359 CXCL6P80162 114 aa9.43□□□□□ -0.9
CPNE1-224ENST00000483359 WFDC13Q8IUB5 93 aa9.43□□□□□ -0.9
CPNE1-224ENST00000483359 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
CPNE1-224ENST00000483359 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
CPNE1-224ENST00000483359 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
CPNE1-224ENST00000483359 MRPL34Q9BQ48 92 aaKnown RBP9.41□□□□□ -0.9
CPNE1-224ENST00000483359 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
CPNE1-224ENST00000483359 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-224ENST00000483359 CASC2Q6XLA1 102 aa9.39□□□□□ -0.91
CPNE1-224ENST00000483359 NDUFS5O43920 106 aa9.37□□□□□ -0.91
CPNE1-224ENST00000483359 LINC00643Q86TS7 51 aa9.37□□□□□ -0.91
CPNE1-224ENST00000483359 HCG22E2RYF7 251 aa9.36□□□□□ -0.91
CPNE1-224ENST00000483359 COX7CP15954 63 aa9.36□□□□□ -0.91
CPNE1-224ENST00000483359 ATP5EP2Q5VTU8 51 aa9.35□□□□□ -0.91
CPNE1-224ENST00000483359 ZCCHC13Q8WW36 166 aaKnown RBP9.32□□□□□ -0.92
CPNE1-224ENST00000483359 ATOX1O00244 68 aa9.32□□□□□ -0.92
CPNE1-224ENST00000483359 TMEM258P61165 79 aa9.32□□□□□ -0.92
CPNE1-224ENST00000483359 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
CPNE1-224ENST00000483359 FAT4Q6V0I7 4981 aa9.27□□□□□ -0.93
CPNE1-224ENST00000483359 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
CPNE1-224ENST00000483359 A0A087WVE0 104 aa9.25□□□□□ -0.93
CPNE1-224ENST00000483359 Q5W150 140 aa9.19□□□□□ -0.94
CPNE1-224ENST00000483359 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
CPNE1-224ENST00000483359 SPINK7P58062 85 aa9.17□□□□□ -0.94
CPNE1-224ENST00000483359 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
CPNE1-224ENST00000483359 C4orf26Q17RF5 130 aa9.15□□□□□ -0.94
CPNE1-224ENST00000483359 PRO0628Q9UI54 55 aa9.15□□□□□ -0.95
CPNE1-224ENST00000483359 COX6B2Q6YFQ2 88 aa9.13□□□□□ -0.95
CPNE1-224ENST00000483359 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
CPNE1-224ENST00000483359 IGKV2D-30A0A075B6S6 120 aa9.11□□□□□ -0.95
CPNE1-224ENST00000483359 IGKV2-30P06310 120 aa9.11□□□□□ -0.95
CPNE1-224ENST00000483359 HRES1P13985 223 aa9.11□□□□□ -0.95
CPNE1-224ENST00000483359 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
CPNE1-224ENST00000483359 CYSTM1Q9H1C7 97 aa9.06□□□□□ -0.96
CPNE1-224ENST00000483359 C7orf65Q6ZTY9 151 aa9.05□□□□□ -0.96
CPNE1-224ENST00000483359 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
CPNE1-224ENST00000483359 SERP1Q9Y6X1 66 aa9.04□□□□□ -0.96
CPNE1-224ENST00000483359 FAM236DA0A1B0GTK5 79 aa9.03□□□□□ -0.96
CPNE1-224ENST00000483359 FAM236CP0DP71 79 aa9.03□□□□□ -0.96
CPNE1-224ENST00000483359 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
CPNE1-224ENST00000483359 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
CPNE1-224ENST00000483359 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
CPNE1-224ENST00000483359 MT1HP80294 61 aa8.99□□□□□ -0.97
CPNE1-224ENST00000483359 SMIM26A0A096LP01 95 aa8.96□□□□□ -0.98
CPNE1-224ENST00000483359 OCR1Q9BZK8 76 aa8.96□□□□□ -0.98
CPNE1-224ENST00000483359 H0Y9P7 68 aa8.95□□□□□ -0.98
CPNE1-224ENST00000483359 FLGP20930 4061 aaPredicted RBP8.94□□□□□ -0.98
CPNE1-224ENST00000483359 V9GYY9 64 aa8.93□□□□□ -0.98
CPNE1-224ENST00000483359 SEC61GP60059 68 aa8.92□□□□□ -0.98
CPNE1-224ENST00000483359 M0R2T5 61 aa8.9□□□□□ -0.98
CPNE1-224ENST00000483359 C20orf197Q8N268 126 aa8.9□□□□□ -0.99
CPNE1-224ENST00000483359 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
CPNE1-224ENST00000483359 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
CPNE1-224ENST00000483359 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
CPNE1-224ENST00000483359 CYP4F30PQ9H0H9 118 aa8.88□□□□□ -0.99
CPNE1-224ENST00000483359 NDUFC1O43677 76 aa8.87□□□□□ -0.99
CPNE1-224ENST00000483359 H7BZZ5 65 aa8.86□□□□□ -0.99
CPNE1-224ENST00000483359 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
CPNE1-224ENST00000483359 LINC00208Q96KT6 92 aa8.86□□□□□ -0.99
CPNE1-224ENST00000483359 MP68P56378 58 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms