RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 NDUFB1O75438 58 aa7.21□□□□□ -1.26
TSPAN1-208ENST00000482928 IGKV4-1P06312 121 aa7.21□□□□□ -1.26
TSPAN1-208ENST00000482928 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
TSPAN1-208ENST00000482928 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
TSPAN1-208ENST00000482928 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
TSPAN1-208ENST00000482928 Q5XG85 94 aa7.19□□□□□ -1.26
TSPAN1-208ENST00000482928 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
TSPAN1-208ENST00000482928 Q8N9L7 120 aa7.16□□□□□ -1.26
TSPAN1-208ENST00000482928 TNXBP22105 4242 aa7.15□□□□□ -1.26
TSPAN1-208ENST00000482928 A8MWP4 228 aa7.15□□□□□ -1.26
TSPAN1-208ENST00000482928 DSCR10P59022 87 aa7.15□□□□□ -1.26
TSPAN1-208ENST00000482928 KRTAP10-8P60410 259 aa7.15□□□□□ -1.26
TSPAN1-208ENST00000482928 Q96NJ1 140 aa7.15□□□□□ -1.26
TSPAN1-208ENST00000482928 K7EQZ3 153 aa7.14□□□□□ -1.27
TSPAN1-208ENST00000482928 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
TSPAN1-208ENST00000482928 A0A087WVE0 104 aa7.13□□□□□ -1.27
TSPAN1-208ENST00000482928 C1orf195Q5TG92 126 aa7.13□□□□□ -1.27
TSPAN1-208ENST00000482928 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
TSPAN1-208ENST00000482928 IGHV6-1A0A0B4J1U7 121 aa7.11□□□□□ -1.27
TSPAN1-208ENST00000482928 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
TSPAN1-208ENST00000482928 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
TSPAN1-208ENST00000482928 SCGB1A1P11684 91 aa7.11□□□□□ -1.27
TSPAN1-208ENST00000482928 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
TSPAN1-208ENST00000482928 HCG22E2RYF7 251 aa7.08□□□□□ -1.28
TSPAN1-208ENST00000482928 C8orf87E5RJ46 101 aa7.06□□□□□ -1.28
TSPAN1-208ENST00000482928 CASC2Q6XLA1 102 aa7.06□□□□□ -1.28
TSPAN1-208ENST00000482928 WFDC13Q8IUB5 93 aa7.06□□□□□ -1.28
TSPAN1-208ENST00000482928 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
TSPAN1-208ENST00000482928 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
TSPAN1-208ENST00000482928 C8orf17Q9NRJ1 99 aa7.05□□□□□ -1.28
TSPAN1-208ENST00000482928 ATOX1O00244 68 aa7.04□□□□□ -1.28
TSPAN1-208ENST00000482928 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.03□□□□□ -1.28
TSPAN1-208ENST00000482928 LINC00313P59037 77 aa7.03□□□□□ -1.28
TSPAN1-208ENST00000482928 hDV103S1A0JD37 113 aa7.02□□□□□ -1.29
TSPAN1-208ENST00000482928 MMP24-AS1A0A0U1RRL7 71 aa7.01□□□□□ -1.29
TSPAN1-208ENST00000482928 SMIM20Q8N5G0 67 aa7.01□□□□□ -1.29
TSPAN1-208ENST00000482928 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
TSPAN1-208ENST00000482928 ANAPC13Q9BS18 74 aa7□□□□□ -1.29
TSPAN1-208ENST00000482928 NDUFS5O43920 106 aa6.99□□□□□ -1.29
TSPAN1-208ENST00000482928 TMEM254Q8TBM7 123 aa6.99□□□□□ -1.29
TSPAN1-208ENST00000482928 MRPL34Q9BQ48 92 aaKnown RBP6.97□□□□□ -1.29
TSPAN1-208ENST00000482928 PRR4Q16378 134 aa6.96□□□□□ -1.3
TSPAN1-208ENST00000482928 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
TSPAN1-208ENST00000482928 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
TSPAN1-208ENST00000482928 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
TSPAN1-208ENST00000482928 TRAV7A0A075B6U4 112 aa6.93□□□□□ -1.3
TSPAN1-208ENST00000482928 LPAP08519 4548 aa6.93□□□□□ -1.3
TSPAN1-208ENST00000482928 SERP2Q8N6R1 65 aa6.92□□□□□ -1.3
TSPAN1-208ENST00000482928 TP53AIP1Q9HCN2 124 aa6.92□□□□□ -1.3
TSPAN1-208ENST00000482928 UQCRQO14949 82 aa6.89□□□□□ -1.31
TSPAN1-208ENST00000482928 PCP4P48539 62 aa6.89□□□□□ -1.31
TSPAN1-208ENST00000482928 OCR1Q9BZK8 76 aa6.89□□□□□ -1.31
TSPAN1-208ENST00000482928 COX7CP15954 63 aa6.87□□□□□ -1.31
TSPAN1-208ENST00000482928 MP68P56378 58 aa6.86□□□□□ -1.31
TSPAN1-208ENST00000482928 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
TSPAN1-208ENST00000482928 C5orf47Q569G3 176 aa6.84□□□□□ -1.31
TSPAN1-208ENST00000482928 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.31
TSPAN1-208ENST00000482928 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
TSPAN1-208ENST00000482928 H0Y9P7 68 aa6.83□□□□□ -1.32
TSPAN1-208ENST00000482928 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
TSPAN1-208ENST00000482928 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
TSPAN1-208ENST00000482928 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
TSPAN1-208ENST00000482928 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
TSPAN1-208ENST00000482928 A8MUU9 505 aa6.78□□□□□ -1.32
TSPAN1-208ENST00000482928 H3BPC8 53 aa6.78□□□□□ -1.32
TSPAN1-208ENST00000482928 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
TSPAN1-208ENST00000482928 Q75L30 129 aa6.78□□□□□ -1.32
TSPAN1-208ENST00000482928 LINC00208Q96KT6 92 aa6.77□□□□□ -1.33
TSPAN1-208ENST00000482928 XP32Q5T750 250 aa6.76□□□□□ -1.33
TSPAN1-208ENST00000482928 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
TSPAN1-208ENST00000482928 ZCCHC13Q8WW36 166 aaKnown RBP6.76□□□□□ -1.33
TSPAN1-208ENST00000482928 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
TSPAN1-208ENST00000482928 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
TSPAN1-208ENST00000482928 LOC101927531A0A1B0GV80 90 aa6.73□□□□□ -1.33
TSPAN1-208ENST00000482928 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
TSPAN1-208ENST00000482928 Q5W150 140 aa6.72□□□□□ -1.33
TSPAN1-208ENST00000482928 KLKP1Q107X0 134 aa6.71□□□□□ -1.34
TSPAN1-208ENST00000482928 NDUFC1O43677 76 aa6.7□□□□□ -1.34
TSPAN1-208ENST00000482928 IGKV2D-30A0A075B6S6 120 aa6.69□□□□□ -1.34
TSPAN1-208ENST00000482928 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
TSPAN1-208ENST00000482928 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
TSPAN1-208ENST00000482928 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
TSPAN1-208ENST00000482928 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
TSPAN1-208ENST00000482928 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
TSPAN1-208ENST00000482928 PCOTHQ58A44 107 aa6.64□□□□□ -1.35
TSPAN1-208ENST00000482928 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
TSPAN1-208ENST00000482928 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
TSPAN1-208ENST00000482928 H7BZZ5 65 aa6.59□□□□□ -1.35
TSPAN1-208ENST00000482928 SPINK7P58062 85 aa6.59□□□□□ -1.35
TSPAN1-208ENST00000482928 TMEM258P61165 79 aa6.59□□□□□ -1.35
TSPAN1-208ENST00000482928 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
TSPAN1-208ENST00000482928 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
TSPAN1-208ENST00000482928 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
TSPAN1-208ENST00000482928 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
TSPAN1-208ENST00000482928 HRES1P13985 223 aa6.53□□□□□ -1.36
TSPAN1-208ENST00000482928 SPANXA2-OT1Q8N9U9 137 aa6.53□□□□□ -1.36
TSPAN1-208ENST00000482928 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
TSPAN1-208ENST00000482928 C4orf26Q17RF5 130 aa6.47□□□□□ -1.37
TSPAN1-208ENST00000482928 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
TSPAN1-208ENST00000482928 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms