RNA–Protein interactions for RNA: ENST00000482462.1

PDGFA-206, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best)

Gene PDGFA, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-206ENST00000482462 V9GYY9 64 aa11.5□□□□□ -0.57
PDGFA-206ENST00000482462 MMP24-AS1A0A0U1RRL7 71 aa11.47□□□□□ -0.57
PDGFA-206ENST00000482462 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
PDGFA-206ENST00000482462 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.57
PDGFA-206ENST00000482462 HERC2O95714 4834 aa11.45□□□□□ -0.58
PDGFA-206ENST00000482462 ASB16-AS1Q495Z4 193 aa11.45□□□□□ -0.58
PDGFA-206ENST00000482462 LINC00483Q53H64 154 aa11.45□□□□□ -0.58
PDGFA-206ENST00000482462 MOBPQ13875 183 aa11.43□□□□□ -0.58
PDGFA-206ENST00000482462 TP53AIP1Q9HCN2 124 aa11.42□□□□□ -0.58
PDGFA-206ENST00000482462 ZNF706Q9Y5V0 76 aaPredicted RBP11.41□□□□□ -0.58
PDGFA-206ENST00000482462 IGLV7-43P04211 117 aa11.4□□□□□ -0.58
PDGFA-206ENST00000482462 PRR4Q16378 134 aa11.4□□□□□ -0.58
PDGFA-206ENST00000482462 Q96NJ1 140 aa11.4□□□□□ -0.58
PDGFA-206ENST00000482462 ZNF861PO60384 105 aa11.39□□□□□ -0.59
PDGFA-206ENST00000482462 C1orf195Q5TG92 126 aa11.39□□□□□ -0.59
PDGFA-206ENST00000482462 CDK2AP2O75956 126 aa11.36□□□□□ -0.59
PDGFA-206ENST00000482462 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
PDGFA-206ENST00000482462 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.59
PDGFA-206ENST00000482462 SMR3BP02814 79 aaPredicted RBP11.33□□□□□ -0.6
PDGFA-206ENST00000482462 LIMD2Q9BT23 127 aa11.33□□□□□ -0.6
PDGFA-206ENST00000482462 C8orf17Q9NRJ1 99 aa11.32□□□□□ -0.6
PDGFA-206ENST00000482462 IGLV9-49A0A0B4J1Y8 123 aa11.3□□□□□ -0.6
PDGFA-206ENST00000482462 RYR1P21817 5038 aa11.29□□□□□ -0.6
PDGFA-206ENST00000482462 A0A1B0GVX0 72 aa11.28□□□□□ -0.6
PDGFA-206ENST00000482462 PSPHP1O15172 72 aa11.28□□□□□ -0.6
PDGFA-206ENST00000482462 Q8N9P0 234 aaPredicted RBP11.28□□□□□ -0.6
PDGFA-206ENST00000482462 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.61
PDGFA-206ENST00000482462 FAT1Q14517 4588 aa11.25□□□□□ -0.61
PDGFA-206ENST00000482462 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
PDGFA-206ENST00000482462 HSPG2P98160 4391 aa11.25□□□□□ -0.61
PDGFA-206ENST00000482462 A8MUN3 132 aa11.25□□□□□ -0.61
PDGFA-206ENST00000482462 Q5VV11 94 aa11.24□□□□□ -0.61
PDGFA-206ENST00000482462 PCLOQ9Y6V0 5065 aa11.23□□□□□ -0.61
PDGFA-206ENST00000482462 COA5Q86WW8 74 aa11.23□□□□□ -0.61
PDGFA-206ENST00000482462 KRTAP10-4P60372 401 aaPredicted RBP11.22□□□□□ -0.61
PDGFA-206ENST00000482462 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
PDGFA-206ENST00000482462 MRPL34Q9BQ48 92 aaKnown RBP11.21□□□□□ -0.61
PDGFA-206ENST00000482462 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
PDGFA-206ENST00000482462 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
PDGFA-206ENST00000482462 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
PDGFA-206ENST00000482462 CD164Q04900 197 aa11.18□□□□□ -0.62
PDGFA-206ENST00000482462 KRTAP4-5Q9BYR2 181 aa11.18□□□□□ -0.62
PDGFA-206ENST00000482462 IGHV6-1A0A0B4J1U7 121 aa11.17□□□□□ -0.62
PDGFA-206ENST00000482462 Q75L30 129 aa11.16□□□□□ -0.62
PDGFA-206ENST00000482462 Q5VSD8 79 aa11.14□□□□□ -0.63
PDGFA-206ENST00000482462 PCOTHQ58A44 107 aa11.13□□□□□ -0.63
PDGFA-206ENST00000482462 PRR15LQ9BU68 103 aa11.13□□□□□ -0.63
PDGFA-206ENST00000482462 ABCA13Q86UQ4 5058 aa11.12□□□□□ -0.63
PDGFA-206ENST00000482462 ANAPC11Q9NYG5 84 aa11.11□□□□□ -0.63
PDGFA-206ENST00000482462 NDUFS5O43920 106 aa11.11□□□□□ -0.63
PDGFA-206ENST00000482462 CHKB-CPT1BH3BT56 60 aa11.1□□□□□ -0.63
PDGFA-206ENST00000482462 KRTAP1-4P0C5Y4 121 aa11.1□□□□□ -0.63
PDGFA-206ENST00000482462 Q8N1X5 172 aa11.09□□□□□ -0.63
PDGFA-206ENST00000482462 LINC01558Q9Y6Z2 57 aa11.08□□□□□ -0.64
PDGFA-206ENST00000482462 PKHD1L1Q86WI1 4243 aa11.08□□□□□ -0.64
PDGFA-206ENST00000482462 C8orf87E5RJ46 101 aa11.05□□□□□ -0.64
PDGFA-206ENST00000482462 KRTAP13-3Q3SY46 172 aa11.05□□□□□ -0.64
PDGFA-206ENST00000482462 PMAIP1Q13794 54 aa11.04□□□□□ -0.64
PDGFA-206ENST00000482462 SSBP3-AS1Q7Z2R9 100 aa11.04□□□□□ -0.64
PDGFA-206ENST00000482462 A0A087X002 238 aa11.03□□□□□ -0.64
PDGFA-206ENST00000482462 NOTCH2NLQ7Z3S9 236 aa11.03□□□□□ -0.64
PDGFA-206ENST00000482462 HRES1P13985 223 aa11.01□□□□□ -0.65
PDGFA-206ENST00000482462 KRTAP13-2Q52LG2 175 aa10.99□□□□□ -0.65
PDGFA-206ENST00000482462 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
PDGFA-206ENST00000482462 A6NED7 52 aa10.95□□□□□ -0.66
PDGFA-206ENST00000482462 CDC42SE1Q9NRR8 79 aa10.95□□□□□ -0.66
PDGFA-206ENST00000482462 Q5W150 140 aa10.93□□□□□ -0.66
PDGFA-206ENST00000482462 SPAG11AQ6PDA7 123 aa10.93□□□□□ -0.66
PDGFA-206ENST00000482462 LCA10Q71F78 164 aa10.93□□□□□ -0.66
PDGFA-206ENST00000482462 PRR26Q8N8Z3 221 aa10.93□□□□□ -0.66
PDGFA-206ENST00000482462 A8MU10 97 aa10.92□□□□□ -0.66
PDGFA-206ENST00000482462 TYMSOSQ8TAI1 123 aa10.92□□□□□ -0.66
PDGFA-206ENST00000482462 ACYP2P14621 99 aa10.88□□□□□ -0.67
PDGFA-206ENST00000482462 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
PDGFA-206ENST00000482462 LINC00313P59037 77 aa10.84□□□□□ -0.67
PDGFA-206ENST00000482462 FAT3Q8TDW7 4589 aa10.81□□□□□ -0.68
PDGFA-206ENST00000482462 SEC61GP60059 68 aa10.8□□□□□ -0.68
PDGFA-206ENST00000482462 KTN1-AS1Q86SY8 53 aa10.8□□□□□ -0.68
PDGFA-206ENST00000482462 LRP1Q07954 4544 aaKnown RBP10.8□□□□□ -0.68
PDGFA-206ENST00000482462 C4orf48Q5BLP8 95 aa10.8□□□□□ -0.68
PDGFA-206ENST00000482462 LINC00304Q8N9R0 145 aa10.8□□□□□ -0.68
PDGFA-206ENST00000482462 FLG2Q5D862 2391 aaPredicted RBP10.79□□□□□ -0.68
PDGFA-206ENST00000482462 A6NN06 94 aa10.79□□□□□ -0.68
PDGFA-206ENST00000482462 SPTSSBQ8NFR3 76 aa10.78□□□□□ -0.68
PDGFA-206ENST00000482462 IGKV2-30P06310 120 aa10.77□□□□□ -0.68
PDGFA-206ENST00000482462 KRTAP10-8P60410 259 aa10.77□□□□□ -0.68
PDGFA-206ENST00000482462 SPINK1P00995 79 aa10.77□□□□□ -0.69
PDGFA-206ENST00000482462 TNXBP22105 4242 aa10.75□□□□□ -0.69
PDGFA-206ENST00000482462 SPINK7P58062 85 aa10.75□□□□□ -0.69
PDGFA-206ENST00000482462 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
PDGFA-206ENST00000482462 RPS29P62273 56 aaKnown RBP10.74□□□□□ -0.69
PDGFA-206ENST00000482462 MYCBP2O75592 4640 aa10.72□□□□□ -0.69
PDGFA-206ENST00000482462 MT1HL1P0DM35 61 aa10.67□□□□□ -0.7
PDGFA-206ENST00000482462 HERC1Q15751 4861 aa10.66□□□□□ -0.7
PDGFA-206ENST00000482462 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
PDGFA-206ENST00000482462 C7orf65Q6ZTY9 151 aa10.62□□□□□ -0.71
PDGFA-206ENST00000482462 A0A1B0GU69 56 aa10.57□□□□□ -0.72
PDGFA-206ENST00000482462 RETNLBQ9BQ08 111 aa10.54□□□□□ -0.72
PDGFA-206ENST00000482462 IGKV2D-30A0A075B6S6 120 aa10.54□□□□□ -0.72
PDGFA-206ENST00000482462 J3QL48 77 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms