RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 C8orf17Q9NRJ1 99 aa12.69□□□□□ -0.38
RUNX1-216ENST00000482318 C1orf195Q5TG92 126 aa12.68□□□□□ -0.38
RUNX1-216ENST00000482318 hDV103S1A0JD37 113 aa12.68□□□□□ -0.38
RUNX1-216ENST00000482318 PKHD1L1Q86WI1 4243 aa12.65□□□□□ -0.38
RUNX1-216ENST00000482318 HSPG2P98160 4391 aa12.65□□□□□ -0.38
RUNX1-216ENST00000482318 RYR1P21817 5038 aa12.65□□□□□ -0.38
RUNX1-216ENST00000482318 C20orf197Q8N268 126 aa12.63□□□□□ -0.39
RUNX1-216ENST00000482318 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
RUNX1-216ENST00000482318 TMEM254Q8TBM7 123 aa12.58□□□□□ -0.4
RUNX1-216ENST00000482318 Q8N1X5 172 aa12.57□□□□□ -0.4
RUNX1-216ENST00000482318 KLKP1Q107X0 134 aa12.57□□□□□ -0.4
RUNX1-216ENST00000482318 C5orf47Q569G3 176 aa12.56□□□□□ -0.4
RUNX1-216ENST00000482318 MRPL34Q9BQ48 92 aaKnown RBP12.55□□□□□ -0.4
RUNX1-216ENST00000482318 NOTCH2NLQ7Z3S9 236 aa12.53□□□□□ -0.4
RUNX1-216ENST00000482318 TP53AIP1Q9HCN2 124 aa12.53□□□□□ -0.4
RUNX1-216ENST00000482318 LINC00313P59037 77 aa12.51□□□□□ -0.41
RUNX1-216ENST00000482318 SNURFQ9Y675 71 aa12.5□□□□□ -0.41
RUNX1-216ENST00000482318 EPPK1P58107 5090 aaKnown RBP12.48□□□□□ -0.41
RUNX1-216ENST00000482318 A0A0U1RQV1 116 aa12.48□□□□□ -0.41
RUNX1-216ENST00000482318 CYSTM1Q9H1C7 97 aa12.48□□□□□ -0.41
RUNX1-216ENST00000482318 KIAA1109Q2LD37 5005 aa12.48□□□□□ -0.41
RUNX1-216ENST00000482318 NDUFC1O43677 76 aa12.47□□□□□ -0.41
RUNX1-216ENST00000482318 NDUFS5O43920 106 aa12.47□□□□□ -0.41
RUNX1-216ENST00000482318 MP68P56378 58 aa12.47□□□□□ -0.41
RUNX1-216ENST00000482318 KRTAP10-8P60410 259 aa12.46□□□□□ -0.41
RUNX1-216ENST00000482318 KRTAP17-1Q9BYP8 105 aa12.45□□□□□ -0.42
RUNX1-216ENST00000482318 TRAV22A0A0B4J277 110 aa12.42□□□□□ -0.42
RUNX1-216ENST00000482318 H0Y9P7 68 aa12.42□□□□□ -0.42
RUNX1-216ENST00000482318 H3BPC8 53 aa12.42□□□□□ -0.42
RUNX1-216ENST00000482318 TMEM258P61165 79 aa12.42□□□□□ -0.42
RUNX1-216ENST00000482318 H7BZZ5 65 aa12.39□□□□□ -0.43
RUNX1-216ENST00000482318 ZCCHC13Q8WW36 166 aaKnown RBP12.37□□□□□ -0.43
RUNX1-216ENST00000482318 Q8N9P0 234 aaPredicted RBP12.35□□□□□ -0.43
RUNX1-216ENST00000482318 KRTAP16-1A8MUX0 517 aa12.34□□□□□ -0.43
RUNX1-216ENST00000482318 LINC00208Q96KT6 92 aa12.34□□□□□ -0.43
RUNX1-216ENST00000482318 FLG2Q5D862 2391 aaPredicted RBP12.33□□□□□ -0.44
RUNX1-216ENST00000482318 LRP1Q07954 4544 aaKnown RBP12.31□□□□□ -0.44
RUNX1-216ENST00000482318 TNXBP22105 4242 aa12.29□□□□□ -0.44
RUNX1-216ENST00000482318 C1orf64Q8NEQ6 169 aa12.29□□□□□ -0.44
RUNX1-216ENST00000482318 RETNLBQ9BQ08 111 aa12.28□□□□□ -0.44
RUNX1-216ENST00000482318 FAT3Q8TDW7 4589 aa12.27□□□□□ -0.44
RUNX1-216ENST00000482318 OXTP01178 125 aa12.25□□□□□ -0.45
RUNX1-216ENST00000482318 FAM236DA0A1B0GTK5 79 aa12.25□□□□□ -0.45
RUNX1-216ENST00000482318 FAM236CP0DP71 79 aa12.25□□□□□ -0.45
RUNX1-216ENST00000482318 MT1HL1P0DM35 61 aa12.23□□□□□ -0.45
RUNX1-216ENST00000482318 ATP5EP56381 51 aaPredicted RBP12.23□□□□□ -0.45
RUNX1-216ENST00000482318 KRTAP13-3Q3SY46 172 aa12.2□□□□□ -0.46
RUNX1-216ENST00000482318 FP248Q71RG6 208 aaPredicted RBP12.2□□□□□ -0.46
RUNX1-216ENST00000482318 Q5W150 140 aa12.2□□□□□ -0.46
RUNX1-216ENST00000482318 LOC101927531A0A1B0GV80 90 aa12.17□□□□□ -0.46
RUNX1-216ENST00000482318 C9orf92A6NGG3 77 aa12.16□□□□□ -0.46
RUNX1-216ENST00000482318 DMBT1Q9UGM3 2413 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-216ENST00000482318 KRTAP4-5Q9BYR2 181 aa12.13□□□□□ -0.47
RUNX1-216ENST00000482318 MYCBP2O75592 4640 aa12.13□□□□□ -0.47
RUNX1-216ENST00000482318 C20orf166-AS1Q96NR2 134 aa12.11□□□□□ -0.47
RUNX1-216ENST00000482318 A8MUU9 505 aa12.08□□□□□ -0.47
RUNX1-216ENST00000482318 SPANXA2-OT1Q8N9U9 137 aa12.08□□□□□ -0.47
RUNX1-216ENST00000482318 RPS28P62857 69 aaKnown RBP12.06□□□□□ -0.48
RUNX1-216ENST00000482318 IGLV7-46A0A075B6I9 117 aa12.05□□□□□ -0.48
RUNX1-216ENST00000482318 PCOTHQ58A44 107 aa12.05□□□□□ -0.48
RUNX1-216ENST00000482318 CYP4F30PQ9H0H9 118 aa12.04□□□□□ -0.48
RUNX1-216ENST00000482318 BIRC6Q9NR09 4857 aa12.04□□□□□ -0.48
RUNX1-216ENST00000482318 SERP1Q9Y6X1 66 aa12.03□□□□□ -0.48
RUNX1-216ENST00000482318 IGKV2-30P06310 120 aa12.02□□□□□ -0.49
RUNX1-216ENST00000482318 Q75L30 129 aa11.99□□□□□ -0.49
RUNX1-216ENST00000482318 PRR4Q16378 134 aa11.94□□□□□ -0.5
RUNX1-216ENST00000482318 IGKV2D-30A0A075B6S6 120 aa11.92□□□□□ -0.5
RUNX1-216ENST00000482318 HERC2O95714 4834 aa11.92□□□□□ -0.5
RUNX1-216ENST00000482318 C7orf65Q6ZTY9 151 aa11.9□□□□□ -0.5
RUNX1-216ENST00000482318 J3QL48 77 aa11.88□□□□□ -0.51
RUNX1-216ENST00000482318 ABCA13Q86UQ4 5058 aa11.86□□□□□ -0.51
RUNX1-216ENST00000482318 HRES1P13985 223 aa11.85□□□□□ -0.51
RUNX1-216ENST00000482318 XP32Q5T750 250 aa11.85□□□□□ -0.51
RUNX1-216ENST00000482318 RPL37P61927 97 aaKnown RBP11.83□□□□□ -0.52
RUNX1-216ENST00000482318 TPRXLQ17RH7 258 aa11.83□□□□□ -0.52
RUNX1-216ENST00000482318 ATP11AUNQ6ZP68 121 aa11.83□□□□□ -0.52
RUNX1-216ENST00000482318 SMIM26A0A096LP01 95 aa11.73□□□□□ -0.53
RUNX1-216ENST00000482318 SPINK7P58062 85 aa11.72□□□□□ -0.53
RUNX1-216ENST00000482318 DMAC1Q96GE9 116 aa11.72□□□□□ -0.53
RUNX1-216ENST00000482318 COA5Q86WW8 74 aa11.7□□□□□ -0.54
RUNX1-216ENST00000482318 ACYP2P14621 99 aa11.69□□□□□ -0.54
RUNX1-216ENST00000482318 A8MUN3 132 aa11.6□□□□□ -0.55
RUNX1-216ENST00000482318 C4orf26Q17RF5 130 aa11.59□□□□□ -0.55
RUNX1-216ENST00000482318 CHKB-CPT1BH3BT56 60 aa11.52□□□□□ -0.56
RUNX1-216ENST00000482318 MPLKIPQ8TAP9 179 aa11.48□□□□□ -0.57
RUNX1-216ENST00000482318 Q1T7F1 81 aa11.46□□□□□ -0.57
RUNX1-216ENST00000482318 V9GYY9 64 aa11.46□□□□□ -0.57
RUNX1-216ENST00000482318 COX6B2Q6YFQ2 88 aa11.46□□□□□ -0.58
RUNX1-216ENST00000482318 SEC61BP60468 96 aaKnown RBP11.43□□□□□ -0.58
RUNX1-216ENST00000482318 LRP2P98164 4655 aa11.42□□□□□ -0.58
RUNX1-216ENST00000482318 LPAP08519 4548 aa11.41□□□□□ -0.58
RUNX1-216ENST00000482318 PCLOQ9Y6V0 5065 aa11.4□□□□□ -0.58
RUNX1-216ENST00000482318 KRTAP3-1Q9BYR8 98 aa11.39□□□□□ -0.59
RUNX1-216ENST00000482318 SPTSSBQ8NFR3 76 aa11.29□□□□□ -0.6
RUNX1-216ENST00000482318 LINC01558Q9Y6Z2 57 aa11.29□□□□□ -0.6
RUNX1-216ENST00000482318 RBM12B-AS1Q9P1G2 102 aa11.24□□□□□ -0.61
RUNX1-216ENST00000482318 PSPHP1O15172 72 aa11.22□□□□□ -0.61
RUNX1-216ENST00000482318 PRR15LQ9BU68 103 aa11.21□□□□□ -0.61
RUNX1-216ENST00000482318 HERC1Q15751 4861 aa11.15□□□□□ -0.62
RUNX1-216ENST00000482318 H1FX-AS1Q4G0G2 97 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms