RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
CTDSP1-208ENST00000482272 A0A1B0GVX0 72 aa6.73□□□□□ -1.33
CTDSP1-208ENST00000482272 HRES1P13985 223 aa6.73□□□□□ -1.33
CTDSP1-208ENST00000482272 J3KT08 172 aa6.72□□□□□ -1.33
CTDSP1-208ENST00000482272 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
CTDSP1-208ENST00000482272 C9JAW5 83 aa6.71□□□□□ -1.34
CTDSP1-208ENST00000482272 BAALC-AS2P0C853 105 aa6.71□□□□□ -1.34
CTDSP1-208ENST00000482272 MTURNQ8N3F0 131 aa6.71□□□□□ -1.34
CTDSP1-208ENST00000482272 NDUFB1O75438 58 aa6.68□□□□□ -1.34
CTDSP1-208ENST00000482272 USH2AO75445 5202 aa6.68□□□□□ -1.34
CTDSP1-208ENST00000482272 MT2AP02795 61 aa6.67□□□□□ -1.34
CTDSP1-208ENST00000482272 Q6ZQT0 140 aa6.67□□□□□ -1.34
CTDSP1-208ENST00000482272 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
CTDSP1-208ENST00000482272 JMJD7-PLA2G4BH0Y9G9 81 aa6.65□□□□□ -1.34
CTDSP1-208ENST00000482272 SSPOA2VEC9 5147 aa6.65□□□□□ -1.35
CTDSP1-208ENST00000482272 A0A1B0GW54 56 aa6.64□□□□□ -1.35
CTDSP1-208ENST00000482272 MT1FP04733 61 aa6.64□□□□□ -1.35
CTDSP1-208ENST00000482272 SPINK7P58062 85 aa6.64□□□□□ -1.35
CTDSP1-208ENST00000482272 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
CTDSP1-208ENST00000482272 ATXN8Q156A1 80 aa6.63□□□□□ -1.35
CTDSP1-208ENST00000482272 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
CTDSP1-208ENST00000482272 Q8N9P0 234 aaPredicted RBP6.62□□□□□ -1.35
CTDSP1-208ENST00000482272 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
CTDSP1-208ENST00000482272 PDE6GP18545 87 aa6.61□□□□□ -1.35
CTDSP1-208ENST00000482272 LYRM7Q5U5X0 104 aa6.61□□□□□ -1.35
CTDSP1-208ENST00000482272 A8MWP4 228 aa6.6□□□□□ -1.35
CTDSP1-208ENST00000482272 M0R143 59 aa6.6□□□□□ -1.35
CTDSP1-208ENST00000482272 LOC110117498A0A087WWA1 95 aa6.59□□□□□ -1.35
CTDSP1-208ENST00000482272 LCE2BO14633 110 aa6.59□□□□□ -1.35
CTDSP1-208ENST00000482272 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
CTDSP1-208ENST00000482272 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
CTDSP1-208ENST00000482272 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
CTDSP1-208ENST00000482272 IGKV3D-7A0A0C4DH55 119 aa6.56□□□□□ -1.36
CTDSP1-208ENST00000482272 Q6ZVQ6 151 aa6.55□□□□□ -1.36
CTDSP1-208ENST00000482272 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
CTDSP1-208ENST00000482272 NREPQ16612 68 aa6.54□□□□□ -1.36
CTDSP1-208ENST00000482272 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
CTDSP1-208ENST00000482272 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
CTDSP1-208ENST00000482272 BATFQ16520 125 aa6.53□□□□□ -1.36
CTDSP1-208ENST00000482272 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
CTDSP1-208ENST00000482272 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
CTDSP1-208ENST00000482272 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
CTDSP1-208ENST00000482272 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
CTDSP1-208ENST00000482272 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
CTDSP1-208ENST00000482272 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
CTDSP1-208ENST00000482272 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
CTDSP1-208ENST00000482272 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
CTDSP1-208ENST00000482272 LINC00846Q9NV44 126 aa6.48□□□□□ -1.37
CTDSP1-208ENST00000482272 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
CTDSP1-208ENST00000482272 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
CTDSP1-208ENST00000482272 NDUFS5O43920 106 aa6.45□□□□□ -1.38
CTDSP1-208ENST00000482272 MACF1Q9UPN3 7388 aaKnown RBP6.43□□□□□ -1.38
CTDSP1-208ENST00000482272 K7EQZ3 153 aa6.42□□□□□ -1.38
CTDSP1-208ENST00000482272 H1FX-AS1Q4G0G2 97 aa6.42□□□□□ -1.38
CTDSP1-208ENST00000482272 H3BT86 120 aa6.41□□□□□ -1.38
CTDSP1-208ENST00000482272 BPY2O14599 106 aa6.4□□□□□ -1.38
CTDSP1-208ENST00000482272 C9orf118A6NHY6 69 aa6.39□□□□□ -1.39
CTDSP1-208ENST00000482272 IGKV2D-30A0A075B6S6 120 aa6.37□□□□□ -1.39
CTDSP1-208ENST00000482272 TAX1BP3O14907 124 aa6.37□□□□□ -1.39
CTDSP1-208ENST00000482272 IGKV2-30P06310 120 aa6.37□□□□□ -1.39
CTDSP1-208ENST00000482272 KRTAP19-6Q3LI70 58 aa6.37□□□□□ -1.39
CTDSP1-208ENST00000482272 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
CTDSP1-208ENST00000482272 A0A1W2PPM0 123 aa6.35□□□□□ -1.39
CTDSP1-208ENST00000482272 Q5W150 140 aa6.34□□□□□ -1.39
CTDSP1-208ENST00000482272 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
CTDSP1-208ENST00000482272 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
CTDSP1-208ENST00000482272 Q8N9L7 120 aa6.31□□□□□ -1.4
CTDSP1-208ENST00000482272 NEBP20929 6669 aa6.29□□□□□ -1.4
CTDSP1-208ENST00000482272 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
CTDSP1-208ENST00000482272 CXCL6P80162 114 aa6.28□□□□□ -1.4
CTDSP1-208ENST00000482272 SPCS1Q9Y6A9 102 aa6.28□□□□□ -1.4
CTDSP1-208ENST00000482272 C4orf26Q17RF5 130 aa6.27□□□□□ -1.41
CTDSP1-208ENST00000482272 PCP4L1A6NKN8 68 aa6.25□□□□□ -1.41
CTDSP1-208ENST00000482272 COL5A1-AS1Q5SY13 56 aa6.25□□□□□ -1.41
CTDSP1-208ENST00000482272 UBL5Q9BZL1 73 aa6.24□□□□□ -1.41
CTDSP1-208ENST00000482272 PRO0461Q9UI25 63 aa6.2□□□□□ -1.42
CTDSP1-208ENST00000482272 K7EP34 96 aa6.19□□□□□ -1.42
CTDSP1-208ENST00000482272 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
CTDSP1-208ENST00000482272 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
CTDSP1-208ENST00000482272 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
CTDSP1-208ENST00000482272 FAM236BA0A1B0GV22 79 aa6.18□□□□□ -1.42
CTDSP1-208ENST00000482272 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
CTDSP1-208ENST00000482272 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
CTDSP1-208ENST00000482272 S4R3F8 94 aa6.16□□□□□ -1.42
CTDSP1-208ENST00000482272 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
CTDSP1-208ENST00000482272 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
CTDSP1-208ENST00000482272 GTF2H5Q6ZYL4 71 aa6.1□□□□□ -1.43
CTDSP1-208ENST00000482272 LCA10Q71F78 164 aa6.1□□□□□ -1.43
CTDSP1-208ENST00000482272 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
CTDSP1-208ENST00000482272 MT1BP07438 61 aa6.07□□□□□ -1.44
CTDSP1-208ENST00000482272 Q5VV11 94 aa6.07□□□□□ -1.44
CTDSP1-208ENST00000482272 A6NN06 94 aa6.06□□□□□ -1.44
CTDSP1-208ENST00000482272 F8W1H4 67 aa6.05□□□□□ -1.44
CTDSP1-208ENST00000482272 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
CTDSP1-208ENST00000482272 ETDBQ3ZM63 59 aa6.04□□□□□ -1.44
CTDSP1-208ENST00000482272 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
CTDSP1-208ENST00000482272 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
CTDSP1-208ENST00000482272 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
CTDSP1-208ENST00000482272 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
CTDSP1-208ENST00000482272 A0A087WVE0 104 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms