RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
CHKB-209ENST00000481673 RYR2Q92736 4967 aa11.53□□□□□ -0.56
CHKB-209ENST00000481673 ATP5EP56381 51 aaPredicted RBP11.52□□□□□ -0.57
CHKB-209ENST00000481673 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
CHKB-209ENST00000481673 FAM236DA0A1B0GTK5 79 aa11.51□□□□□ -0.57
CHKB-209ENST00000481673 FAM236CP0DP71 79 aa11.51□□□□□ -0.57
CHKB-209ENST00000481673 SPINK1P00995 79 aa11.5□□□□□ -0.57
CHKB-209ENST00000481673 C8orf87E5RJ46 101 aa11.49□□□□□ -0.57
CHKB-209ENST00000481673 SMR3BP02814 79 aaPredicted RBP11.49□□□□□ -0.57
CHKB-209ENST00000481673 ZCCHC13Q8WW36 166 aaKnown RBP11.49□□□□□ -0.57
CHKB-209ENST00000481673 MRPL34Q9BQ48 92 aaKnown RBP11.47□□□□□ -0.57
CHKB-209ENST00000481673 SPAG11AQ6PDA7 123 aa11.46□□□□□ -0.57
CHKB-209ENST00000481673 RPS29P62273 56 aaKnown RBP11.46□□□□□ -0.58
CHKB-209ENST00000481673 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
CHKB-209ENST00000481673 H0Y9P7 68 aa11.43□□□□□ -0.58
CHKB-209ENST00000481673 KMT2CQ8NEZ4 4911 aaKnown RBP11.43□□□□□ -0.58
CHKB-209ENST00000481673 TRAV22A0A0B4J277 110 aa11.42□□□□□ -0.58
CHKB-209ENST00000481673 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
CHKB-209ENST00000481673 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
CHKB-209ENST00000481673 LINC00208Q96KT6 92 aa11.4□□□□□ -0.59
CHKB-209ENST00000481673 PRR26Q8N8Z3 221 aa11.38□□□□□ -0.59
CHKB-209ENST00000481673 LINC00304Q8N9R0 145 aa11.38□□□□□ -0.59
CHKB-209ENST00000481673 APOBP04114 4563 aaKnown RBP11.37□□□□□ -0.59
CHKB-209ENST00000481673 NDUFS5O43920 106 aa11.37□□□□□ -0.59
CHKB-209ENST00000481673 LINC00313P59037 77 aa11.37□□□□□ -0.59
CHKB-209ENST00000481673 NOTCH2NLQ7Z3S9 236 aa11.37□□□□□ -0.59
CHKB-209ENST00000481673 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
CHKB-209ENST00000481673 SERP1Q9Y6X1 66 aa11.36□□□□□ -0.59
CHKB-209ENST00000481673 C1orf64Q8NEQ6 169 aa11.34□□□□□ -0.59
CHKB-209ENST00000481673 SPANXA2-OT1Q8N9U9 137 aa11.27□□□□□ -0.61
CHKB-209ENST00000481673 Q8N9P0 234 aaPredicted RBP11.26□□□□□ -0.61
CHKB-209ENST00000481673 FAT1Q14517 4588 aa11.25□□□□□ -0.61
CHKB-209ENST00000481673 CYP4F30PQ9H0H9 118 aa11.23□□□□□ -0.61
CHKB-209ENST00000481673 LOC101927531A0A1B0GV80 90 aa11.2□□□□□ -0.62
CHKB-209ENST00000481673 KRTAP16-1A8MUX0 517 aa11.18□□□□□ -0.62
CHKB-209ENST00000481673 OXTP01178 125 aa11.17□□□□□ -0.62
CHKB-209ENST00000481673 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
CHKB-209ENST00000481673 Q5VSD8 79 aa11.16□□□□□ -0.62
CHKB-209ENST00000481673 SMIM26A0A096LP01 95 aa11.13□□□□□ -0.63
CHKB-209ENST00000481673 Q5W150 140 aa11.13□□□□□ -0.63
CHKB-209ENST00000481673 IGLV7-46A0A075B6I9 117 aa11.12□□□□□ -0.63
CHKB-209ENST00000481673 RYR3Q15413 4870 aa11.11□□□□□ -0.63
CHKB-209ENST00000481673 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
CHKB-209ENST00000481673 KRTAP10-8P60410 259 aa11.06□□□□□ -0.64
CHKB-209ENST00000481673 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
CHKB-209ENST00000481673 PRR4Q16378 134 aa11.04□□□□□ -0.64
CHKB-209ENST00000481673 HSPG2P98160 4391 aa11.01□□□□□ -0.65
CHKB-209ENST00000481673 IGKV2-30P06310 120 aa10.98□□□□□ -0.65
CHKB-209ENST00000481673 Q8N1X5 172 aa10.98□□□□□ -0.65
CHKB-209ENST00000481673 RYR1P21817 5038 aa10.97□□□□□ -0.65
CHKB-209ENST00000481673 FP248Q71RG6 208 aaPredicted RBP10.93□□□□□ -0.66
CHKB-209ENST00000481673 C20orf166-AS1Q96NR2 134 aa10.93□□□□□ -0.66
CHKB-209ENST00000481673 RETNLBQ9BQ08 111 aa10.92□□□□□ -0.66
CHKB-209ENST00000481673 A8MUU9 505 aa10.91□□□□□ -0.66
CHKB-209ENST00000481673 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
CHKB-209ENST00000481673 C9orf92A6NGG3 77 aa10.87□□□□□ -0.67
CHKB-209ENST00000481673 HRES1P13985 223 aa10.87□□□□□ -0.67
CHKB-209ENST00000481673 COA5Q86WW8 74 aa10.86□□□□□ -0.67
CHKB-209ENST00000481673 V9GYY9 64 aa10.84□□□□□ -0.67
CHKB-209ENST00000481673 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
CHKB-209ENST00000481673 ACYP2P14621 99 aa10.83□□□□□ -0.68
CHKB-209ENST00000481673 Q1T7F1 81 aa10.83□□□□□ -0.68
CHKB-209ENST00000481673 C4orf26Q17RF5 130 aa10.83□□□□□ -0.68
CHKB-209ENST00000481673 C7orf65Q6ZTY9 151 aa10.83□□□□□ -0.68
CHKB-209ENST00000481673 KRTAP17-1Q9BYP8 105 aa10.81□□□□□ -0.68
CHKB-209ENST00000481673 TNXBP22105 4242 aa10.81□□□□□ -0.68
CHKB-209ENST00000481673 KIAA1109Q2LD37 5005 aa10.8□□□□□ -0.68
CHKB-209ENST00000481673 Q75L30 129 aa10.8□□□□□ -0.68
CHKB-209ENST00000481673 MPLKIPQ8TAP9 179 aa10.8□□□□□ -0.68
CHKB-209ENST00000481673 DMAC1Q96GE9 116 aa10.8□□□□□ -0.68
CHKB-209ENST00000481673 LRP1Q07954 4544 aaKnown RBP10.79□□□□□ -0.68
CHKB-209ENST00000481673 MT1HL1P0DM35 61 aa10.76□□□□□ -0.69
CHKB-209ENST00000481673 FAT3Q8TDW7 4589 aa10.73□□□□□ -0.69
CHKB-209ENST00000481673 DMBT1Q9UGM3 2413 aaPredicted RBP10.69□□□□□ -0.7
CHKB-209ENST00000481673 EPPK1P58107 5090 aaKnown RBP10.69□□□□□ -0.7
CHKB-209ENST00000481673 A8MUN3 132 aa10.67□□□□□ -0.7
CHKB-209ENST00000481673 ATP11AUNQ6ZP68 121 aa10.64□□□□□ -0.71
CHKB-209ENST00000481673 CHKB-CPT1BH3BT56 60 aa10.64□□□□□ -0.71
CHKB-209ENST00000481673 SPINK7P58062 85 aa10.6□□□□□ -0.71
CHKB-209ENST00000481673 RPL37P61927 97 aaKnown RBP10.59□□□□□ -0.71
CHKB-209ENST00000481673 MYCBP2O75592 4640 aa10.58□□□□□ -0.72
CHKB-209ENST00000481673 LINC01558Q9Y6Z2 57 aa10.57□□□□□ -0.72
CHKB-209ENST00000481673 XP32Q5T750 250 aa10.56□□□□□ -0.72
CHKB-209ENST00000481673 PSPHP1O15172 72 aa10.53□□□□□ -0.72
CHKB-209ENST00000481673 TPRXLQ17RH7 258 aa10.5□□□□□ -0.73
CHKB-209ENST00000481673 PRR15LQ9BU68 103 aa10.49□□□□□ -0.73
CHKB-209ENST00000481673 KRTAP4-5Q9BYR2 181 aa10.48□□□□□ -0.73
CHKB-209ENST00000481673 Q5VV11 94 aa10.47□□□□□ -0.73
CHKB-209ENST00000481673 SPTSSBQ8NFR3 76 aa10.43□□□□□ -0.74
CHKB-209ENST00000481673 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
CHKB-209ENST00000481673 BRK1Q8WUW1 75 aa10.38□□□□□ -0.75
CHKB-209ENST00000481673 PRO0628Q9UI54 55 aa10.38□□□□□ -0.75
CHKB-209ENST00000481673 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
CHKB-209ENST00000481673 J3QL48 77 aa10.34□□□□□ -0.75
CHKB-209ENST00000481673 A0A1B0GU69 56 aa10.3□□□□□ -0.76
CHKB-209ENST00000481673 A6NED7 52 aa10.27□□□□□ -0.77
CHKB-209ENST00000481673 BIRC6Q9NR09 4857 aa10.23□□□□□ -0.77
CHKB-209ENST00000481673 SEC61GP60059 68 aa10.22□□□□□ -0.77
CHKB-209ENST00000481673 HERC2O95714 4834 aa10.21□□□□□ -0.78
CHKB-209ENST00000481673 ABCA13Q86UQ4 5058 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms