RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 SIGMAR1Q99720 223 aa12.08□□□□□ -0.48
TTC3-217ENST00000481605 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
TTC3-217ENST00000481605 RBM3P98179 157 aaKnown RBP12.06□□□□□ -0.48
TTC3-217ENST00000481605 CCKP06307 115 aa12.05□□□□□ -0.48
TTC3-217ENST00000481605 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
TTC3-217ENST00000481605 GTF2H5Q6ZYL4 71 aa12.05□□□□□ -0.48
TTC3-217ENST00000481605 DSCR8Q96T75 97 aa12.02□□□□□ -0.48
TTC3-217ENST00000481605 JMJD7-PLA2G4BH0Y9G9 81 aa12.01□□□□□ -0.49
TTC3-217ENST00000481605 IGKV4-1P06312 121 aa12.01□□□□□ -0.49
TTC3-217ENST00000481605 LINC00313P59037 77 aa12.01□□□□□ -0.49
TTC3-217ENST00000481605 VPS25Q9BRG1 176 aa11.97□□□□□ -0.49
TTC3-217ENST00000481605 LOC110117498A0A087WWA1 95 aa11.96□□□□□ -0.5
TTC3-217ENST00000481605 DEFB116Q30KQ4 102 aa11.95□□□□□ -0.5
TTC3-217ENST00000481605 KRTAP16-1A8MUX0 517 aa11.94□□□□□ -0.5
TTC3-217ENST00000481605 A0A1B0GV90 55 aa11.93□□□□□ -0.5
TTC3-217ENST00000481605 Q6ZQT0 140 aa11.93□□□□□ -0.5
TTC3-217ENST00000481605 LINC00472Q9H8W2 130 aa11.93□□□□□ -0.5
TTC3-217ENST00000481605 F8W1H4 67 aa11.92□□□□□ -0.5
TTC3-217ENST00000481605 NOTCH2NLQ7Z3S9 236 aa11.92□□□□□ -0.5
TTC3-217ENST00000481605 C14orf132Q9NPU4 83 aa11.92□□□□□ -0.5
TTC3-217ENST00000481605 PDE6GP18545 87 aa11.91□□□□□ -0.5
TTC3-217ENST00000481605 IGHV6-1A0A0B4J1U7 121 aa11.86□□□□□ -0.51
TTC3-217ENST00000481605 C21orf62-AS1Q17RA5 79 aa11.85□□□□□ -0.51
TTC3-217ENST00000481605 KRTAP9-8Q9BYQ0 159 aa11.85□□□□□ -0.51
TTC3-217ENST00000481605 FAM236DA0A1B0GTK5 79 aa11.82□□□□□ -0.52
TTC3-217ENST00000481605 A0A1B0GW54 56 aa11.82□□□□□ -0.52
TTC3-217ENST00000481605 FAM236CP0DP71 79 aa11.82□□□□□ -0.52
TTC3-217ENST00000481605 ETDBQ3ZM63 59 aa11.8□□□□□ -0.52
TTC3-217ENST00000481605 A0A1B0GVX0 72 aa11.77□□□□□ -0.52
TTC3-217ENST00000481605 HRES1P13985 223 aa11.77□□□□□ -0.52
TTC3-217ENST00000481605 C8orf87E5RJ46 101 aa11.76□□□□□ -0.53
TTC3-217ENST00000481605 MPLKIPQ8TAP9 179 aa11.76□□□□□ -0.53
TTC3-217ENST00000481605 RBM12B-AS1Q9P1G2 102 aa11.76□□□□□ -0.53
TTC3-217ENST00000481605 J3KT08 172 aa11.72□□□□□ -0.53
TTC3-217ENST00000481605 MT2AP02795 61 aa11.65□□□□□ -0.54
TTC3-217ENST00000481605 NREPQ16612 68 aa11.64□□□□□ -0.55
TTC3-217ENST00000481605 ZCCHC13Q8WW36 166 aaKnown RBP11.64□□□□□ -0.55
TTC3-217ENST00000481605 NDUFB1O75438 58 aa11.61□□□□□ -0.55
TTC3-217ENST00000481605 A8MWP4 228 aa11.6□□□□□ -0.55
TTC3-217ENST00000481605 LINC00846Q9NV44 126 aa11.58□□□□□ -0.56
TTC3-217ENST00000481605 MT1FP04733 61 aa11.57□□□□□ -0.56
TTC3-217ENST00000481605 SPINK7P58062 85 aa11.57□□□□□ -0.56
TTC3-217ENST00000481605 IGKV3D-7A0A0C4DH55 119 aa11.56□□□□□ -0.56
TTC3-217ENST00000481605 Q8N9P0 234 aaPredicted RBP11.56□□□□□ -0.56
TTC3-217ENST00000481605 USH2AO75445 5202 aa11.56□□□□□ -0.56
TTC3-217ENST00000481605 Q6ZVQ6 151 aa11.55□□□□□ -0.56
TTC3-217ENST00000481605 C8orf17Q9NRJ1 99 aa11.53□□□□□ -0.56
TTC3-217ENST00000481605 KRTAP10-10P60014 251 aa11.52□□□□□ -0.57
TTC3-217ENST00000481605 PRR15Q8IV56 129 aa11.51□□□□□ -0.57
TTC3-217ENST00000481605 FAM240AA0A1B0GVK7 77 aa11.5□□□□□ -0.57
TTC3-217ENST00000481605 ACYP1P07311 99 aa11.48□□□□□ -0.57
TTC3-217ENST00000481605 KRTAP9-3Q9BYQ3 159 aa11.48□□□□□ -0.57
TTC3-217ENST00000481605 UBL5Q9BZL1 73 aa11.48□□□□□ -0.57
TTC3-217ENST00000481605 SSPOA2VEC9 5147 aa11.47□□□□□ -0.57
TTC3-217ENST00000481605 LCE2BO14633 110 aa11.46□□□□□ -0.57
TTC3-217ENST00000481605 BPY2O14599 106 aa11.45□□□□□ -0.58
TTC3-217ENST00000481605 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.45□□□□□ -0.58
TTC3-217ENST00000481605 K7EQZ3 153 aa11.44□□□□□ -0.58
TTC3-217ENST00000481605 WFDC13Q8IUB5 93 aa11.43□□□□□ -0.58
TTC3-217ENST00000481605 MMP24-AS1A0A0U1RRL7 71 aa11.4□□□□□ -0.58
TTC3-217ENST00000481605 KRTAP9-7A8MTY7 169 aa11.35□□□□□ -0.59
TTC3-217ENST00000481605 TMEM254Q8TBM7 123 aa11.35□□□□□ -0.59
TTC3-217ENST00000481605 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
TTC3-217ENST00000481605 CXCL6P80162 114 aa11.34□□□□□ -0.59
TTC3-217ENST00000481605 KRTAP19-1Q8IUB9 90 aa11.34□□□□□ -0.59
TTC3-217ENST00000481605 Q8N9L7 120 aa11.34□□□□□ -0.59
TTC3-217ENST00000481605 MRPL34Q9BQ48 92 aaKnown RBP11.34□□□□□ -0.59
TTC3-217ENST00000481605 J3QR89 54 aa11.33□□□□□ -0.6
TTC3-217ENST00000481605 FCGBPQ9Y6R7 5405 aaPredicted RBP11.29□□□□□ -0.6
TTC3-217ENST00000481605 NDUFS5O43920 106 aa11.25□□□□□ -0.61
TTC3-217ENST00000481605 ATP5EP2Q5VTU8 51 aa11.25□□□□□ -0.61
TTC3-217ENST00000481605 LINC00643Q86TS7 51 aa11.25□□□□□ -0.61
TTC3-217ENST00000481605 CASC2Q6XLA1 102 aa11.22□□□□□ -0.61
TTC3-217ENST00000481605 K7ERU9 68 aa11.2□□□□□ -0.62
TTC3-217ENST00000481605 H1FX-AS1Q4G0G2 97 aa11.18□□□□□ -0.62
TTC3-217ENST00000481605 HCG22E2RYF7 251 aa11.14□□□□□ -0.63
TTC3-217ENST00000481605 IGKV2D-30A0A075B6S6 120 aa11.14□□□□□ -0.63
TTC3-217ENST00000481605 IGKV2-30P06310 120 aa11.14□□□□□ -0.63
TTC3-217ENST00000481605 Q5W150 140 aa11.12□□□□□ -0.63
TTC3-217ENST00000481605 C7orf65Q6ZTY9 151 aa11.09□□□□□ -0.63
TTC3-217ENST00000481605 KRTAP19-6Q3LI70 58 aa11.09□□□□□ -0.63
TTC3-217ENST00000481605 HIST1H4AP62805 103 aaKnown RBP11.04□□□□□ -0.64
TTC3-217ENST00000481605 A0A087WVE0 104 aa11□□□□□ -0.65
TTC3-217ENST00000481605 C4orf26Q17RF5 130 aa10.97□□□□□ -0.65
TTC3-217ENST00000481605 MACF1Q9UPN3 7388 aaKnown RBP10.95□□□□□ -0.66
TTC3-217ENST00000481605 MT-ATP8P03928 68 aa10.95□□□□□ -0.66
TTC3-217ENST00000481605 TP53AIP1Q9HCN2 124 aa10.93□□□□□ -0.66
TTC3-217ENST00000481605 IMUPQ9GZP8 106 aa10.92□□□□□ -0.66
TTC3-217ENST00000481605 SYNE2Q8WXH0 6885 aaKnown RBP10.83□□□□□ -0.68
TTC3-217ENST00000481605 C5orf47Q569G3 176 aa10.82□□□□□ -0.68
TTC3-217ENST00000481605 KRTAP3-1Q9BYR8 98 aa10.79□□□□□ -0.68
TTC3-217ENST00000481605 OCR1Q9BZK8 76 aa10.79□□□□□ -0.68
TTC3-217ENST00000481605 UQCRQO14949 82 aa10.76□□□□□ -0.69
TTC3-217ENST00000481605 S4R3F8 94 aa10.75□□□□□ -0.69
TTC3-217ENST00000481605 TRAV22A0A0B4J277 110 aa10.74□□□□□ -0.69
TTC3-217ENST00000481605 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
TTC3-217ENST00000481605 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
TTC3-217ENST00000481605 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
TTC3-217ENST00000481605 CSAG1Q6PB30 78 aa10.68□□□□□ -0.7
TTC3-217ENST00000481605 LCA10Q71F78 164 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms