RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 BRK1Q8WUW1 75 aa10.92□□□□□ -0.66
MRPL28-209ENST00000481453 Q1T7F1 81 aa10.91□□□□□ -0.66
MRPL28-209ENST00000481453 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.66
MRPL28-209ENST00000481453 C8orf17Q9NRJ1 99 aa10.87□□□□□ -0.67
MRPL28-209ENST00000481453 ASB16-AS1Q495Z4 193 aa10.86□□□□□ -0.67
MRPL28-209ENST00000481453 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
MRPL28-209ENST00000481453 A0A1B0GVY2 172 aa10.85□□□□□ -0.67
MRPL28-209ENST00000481453 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
MRPL28-209ENST00000481453 TP53AIP1Q9HCN2 124 aa10.84□□□□□ -0.67
MRPL28-209ENST00000481453 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
MRPL28-209ENST00000481453 A0A1B0GVX0 72 aa10.83□□□□□ -0.68
MRPL28-209ENST00000481453 PSPHP1O15172 72 aa10.8□□□□□ -0.68
MRPL28-209ENST00000481453 NDUFS5O43920 106 aa10.8□□□□□ -0.68
MRPL28-209ENST00000481453 RYR2Q92736 4967 aa10.79□□□□□ -0.68
MRPL28-209ENST00000481453 A0A087X002 238 aa10.78□□□□□ -0.68
MRPL28-209ENST00000481453 VPS13BQ7Z7G8 4022 aa10.77□□□□□ -0.69
MRPL28-209ENST00000481453 V9GYY9 64 aa10.77□□□□□ -0.69
MRPL28-209ENST00000481453 KRTAP13-2Q52LG2 175 aa10.76□□□□□ -0.69
MRPL28-209ENST00000481453 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
MRPL28-209ENST00000481453 IGLV7-46A0A075B6I9 117 aa10.76□□□□□ -0.69
MRPL28-209ENST00000481453 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
MRPL28-209ENST00000481453 SSBP3-AS1Q7Z2R9 100 aa10.76□□□□□ -0.69
MRPL28-209ENST00000481453 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
MRPL28-209ENST00000481453 MRPL34Q9BQ48 92 aaKnown RBP10.75□□□□□ -0.69
MRPL28-209ENST00000481453 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
MRPL28-209ENST00000481453 CD164Q04900 197 aa10.72□□□□□ -0.69
MRPL28-209ENST00000481453 SPINK6Q6UWN8 80 aa10.71□□□□□ -0.69
MRPL28-209ENST00000481453 KMT2CQ8NEZ4 4911 aaKnown RBP10.71□□□□□ -0.7
MRPL28-209ENST00000481453 A8MUN3 132 aa10.7□□□□□ -0.7
MRPL28-209ENST00000481453 COA5Q86WW8 74 aa10.69□□□□□ -0.7
MRPL28-209ENST00000481453 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
MRPL28-209ENST00000481453 C1orf195Q5TG92 126 aa10.65□□□□□ -0.7
MRPL28-209ENST00000481453 SMR3BP02814 79 aaPredicted RBP10.65□□□□□ -0.71
MRPL28-209ENST00000481453 LIMD2Q9BT23 127 aa10.65□□□□□ -0.71
MRPL28-209ENST00000481453 APOBP04114 4563 aaKnown RBP10.64□□□□□ -0.71
MRPL28-209ENST00000481453 Q5VV11 94 aa10.62□□□□□ -0.71
MRPL28-209ENST00000481453 PLA2G1BP04054 148 aaKnown RBP10.6□□□□□ -0.71
MRPL28-209ENST00000481453 KRTAP10-4P60372 401 aaPredicted RBP10.6□□□□□ -0.71
MRPL28-209ENST00000481453 PRR15LQ9BU68 103 aa10.59□□□□□ -0.71
MRPL28-209ENST00000481453 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
MRPL28-209ENST00000481453 Q5W150 140 aa10.57□□□□□ -0.72
MRPL28-209ENST00000481453 CHKB-CPT1BH3BT56 60 aa10.56□□□□□ -0.72
MRPL28-209ENST00000481453 C8orf87E5RJ46 101 aa10.54□□□□□ -0.72
MRPL28-209ENST00000481453 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
MRPL28-209ENST00000481453 KRTAP13-3Q3SY46 172 aa10.52□□□□□ -0.73
MRPL28-209ENST00000481453 FAT1Q14517 4588 aa10.52□□□□□ -0.73
MRPL28-209ENST00000481453 HRES1P13985 223 aa10.52□□□□□ -0.73
MRPL28-209ENST00000481453 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
MRPL28-209ENST00000481453 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
MRPL28-209ENST00000481453 LINC00313P59037 77 aa10.48□□□□□ -0.73
MRPL28-209ENST00000481453 Q75L30 129 aa10.48□□□□□ -0.73
MRPL28-209ENST00000481453 A8MU10 97 aa10.46□□□□□ -0.74
MRPL28-209ENST00000481453 LINC01558Q9Y6Z2 57 aa10.45□□□□□ -0.74
MRPL28-209ENST00000481453 RYR3Q15413 4870 aa10.44□□□□□ -0.74
MRPL28-209ENST00000481453 SPINK1P00995 79 aa10.43□□□□□ -0.74
MRPL28-209ENST00000481453 C4orf48Q5BLP8 95 aa10.43□□□□□ -0.74
MRPL28-209ENST00000481453 A6NED7 52 aa10.42□□□□□ -0.74
MRPL28-209ENST00000481453 LINC00304Q8N9R0 145 aa10.41□□□□□ -0.74
MRPL28-209ENST00000481453 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
MRPL28-209ENST00000481453 RETNLBQ9BQ08 111 aa10.39□□□□□ -0.75
MRPL28-209ENST00000481453 ACYP2P14621 99 aa10.37□□□□□ -0.75
MRPL28-209ENST00000481453 PKHD1L1Q86WI1 4243 aa10.36□□□□□ -0.75
MRPL28-209ENST00000481453 RPS29P62273 56 aaKnown RBP10.36□□□□□ -0.75
MRPL28-209ENST00000481453 LCA10Q71F78 164 aa10.35□□□□□ -0.75
MRPL28-209ENST00000481453 PMAIP1Q13794 54 aa10.34□□□□□ -0.75
MRPL28-209ENST00000481453 HSPG2P98160 4391 aa10.32□□□□□ -0.76
MRPL28-209ENST00000481453 KRTAP16-1A8MUX0 517 aa10.31□□□□□ -0.76
MRPL28-209ENST00000481453 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
MRPL28-209ENST00000481453 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
MRPL28-209ENST00000481453 SPTSSBQ8NFR3 76 aa10.3□□□□□ -0.76
MRPL28-209ENST00000481453 CDC42SE1Q9NRR8 79 aa10.28□□□□□ -0.76
MRPL28-209ENST00000481453 ATP11AUNQ6ZP68 121 aa10.27□□□□□ -0.77
MRPL28-209ENST00000481453 Q5VSD8 79 aa10.26□□□□□ -0.77
MRPL28-209ENST00000481453 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
MRPL28-209ENST00000481453 SPINK7P58062 85 aa10.25□□□□□ -0.77
MRPL28-209ENST00000481453 RYR1P21817 5038 aa10.22□□□□□ -0.77
MRPL28-209ENST00000481453 IGKV2D-30A0A075B6S6 120 aa10.21□□□□□ -0.78
MRPL28-209ENST00000481453 SEC61GP60059 68 aa10.17□□□□□ -0.78
MRPL28-209ENST00000481453 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
MRPL28-209ENST00000481453 Q8N1X5 172 aa10.14□□□□□ -0.79
MRPL28-209ENST00000481453 LRP1Q07954 4544 aaKnown RBP10.13□□□□□ -0.79
MRPL28-209ENST00000481453 TNXBP22105 4242 aa10.12□□□□□ -0.79
MRPL28-209ENST00000481453 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
MRPL28-209ENST00000481453 A6NN06 94 aa10.1□□□□□ -0.79
MRPL28-209ENST00000481453 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
MRPL28-209ENST00000481453 A0A1B0GU69 56 aa10.1□□□□□ -0.79
MRPL28-209ENST00000481453 C7orf65Q6ZTY9 151 aa10.1□□□□□ -0.79
MRPL28-209ENST00000481453 KTN1-AS1Q86SY8 53 aa10.1□□□□□ -0.79
MRPL28-209ENST00000481453 EPPK1P58107 5090 aaKnown RBP10.06□□□□□ -0.8
MRPL28-209ENST00000481453 C9orf92A6NGG3 77 aa10.05□□□□□ -0.8
MRPL28-209ENST00000481453 FAT3Q8TDW7 4589 aa10.03□□□□□ -0.8
MRPL28-209ENST00000481453 C20orf166-AS1Q96NR2 134 aa9.99□□□□□ -0.81
MRPL28-209ENST00000481453 A8MUU9 505 aa9.98□□□□□ -0.81
MRPL28-209ENST00000481453 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
MRPL28-209ENST00000481453 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
MRPL28-209ENST00000481453 UQCR11O14957 56 aa9.9□□□□□ -0.82
MRPL28-209ENST00000481453 MYCBP2O75592 4640 aa9.89□□□□□ -0.83
MRPL28-209ENST00000481453 MIR22HGQ0VDD5 57 aa9.88□□□□□ -0.83
MRPL28-209ENST00000481453 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
MRPL28-209ENST00000481453 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms