RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 LINC01546A6NGU7 62 aa0.54□□□□□ -2.32
SGIP1-209ENST00000480548 HMCN2Q8NDA2 5059 aa0.53□□□□□ -2.32
SGIP1-209ENST00000480548 ZZEF1O43149 2961 aa0.53□□□□□ -2.32
SGIP1-209ENST00000480548 COL7A1Q02388 2944 aa0.53□□□□□ -2.32
SGIP1-209ENST00000480548 KAAG1Q9UBP8 84 aa0.52□□□□□ -2.33
SGIP1-209ENST00000480548 LMO7Q8WWI1 1683 aa0.52□□□□□ -2.33
SGIP1-209ENST00000480548 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
SGIP1-209ENST00000480548 H3BNG1 76 aa0.51□□□□□ -2.33
SGIP1-209ENST00000480548 C9orf92A6NGG3 77 aa0.5□□□□□ -2.33
SGIP1-209ENST00000480548 TFF3Q07654 80 aa0.5□□□□□ -2.33
SGIP1-209ENST00000480548 WFDC10BQ8IUB3 73 aa0.5□□□□□ -2.33
SGIP1-209ENST00000480548 NOP10Q9NPE3 64 aaKnown RBP0.5□□□□□ -2.33
SGIP1-209ENST00000480548 IGLV5-48A0A075B6I7 105 aa0.49□□□□□ -2.33
SGIP1-209ENST00000480548 FSIP2Q5CZC0 6907 aa0.49□□□□□ -2.33
SGIP1-209ENST00000480548 PDZD2O15018 2839 aa0.48□□□□□ -2.33
SGIP1-209ENST00000480548 COL6A3P12111 3177 aa0.48□□□□□ -2.33
SGIP1-209ENST00000480548 PKD1P98161 4303 aa0.48□□□□□ -2.33
SGIP1-209ENST00000480548 TENM2Q9NT68 2774 aa0.47□□□□□ -2.33
SGIP1-209ENST00000480548 SRRM2Q9UQ35 2752 aaKnown RBP0.47□□□□□ -2.33
SGIP1-209ENST00000480548 A0A1B0GUL6 1792 aa0.47□□□□□ -2.33
SGIP1-209ENST00000480548 DMXL1Q9Y485 3027 aa0.46□□□□□ -2.34
SGIP1-209ENST00000480548 VPS13BQ7Z7G8 4022 aa0.46□□□□□ -2.34
SGIP1-209ENST00000480548 TOMM5Q8N4H5 51 aa0.46□□□□□ -2.34
SGIP1-209ENST00000480548 SPTBN4Q9H254 2564 aa0.46□□□□□ -2.34
SGIP1-209ENST00000480548 SMIM2Q9BVW6 85 aa0.45□□□□□ -2.34
SGIP1-209ENST00000480548 GCN1Q92616 2671 aaKnown RBP0.45□□□□□ -2.34
SGIP1-209ENST00000480548 KIF21BO75037 1637 aa0.45□□□□□ -2.34
SGIP1-209ENST00000480548 MACF1Q9UPN3 7388 aaKnown RBP0.43□□□□□ -2.34
SGIP1-209ENST00000480548 MAP1AP78559 2803 aaPredicted RBP0.43□□□□□ -2.34
SGIP1-209ENST00000480548 IQGAP1P46940 1657 aa0.43□□□□□ -2.34
SGIP1-209ENST00000480548 KMT2DO14686 5537 aa0.42□□□□□ -2.34
SGIP1-209ENST00000480548 LRP1BQ9NZR2 4599 aa0.42□□□□□ -2.34
SGIP1-209ENST00000480548 CUBNO60494 3623 aa0.41□□□□□ -2.34
SGIP1-209ENST00000480548 DDX60Q8IY21 1712 aaKnown RBP0.41□□□□□ -2.34
SGIP1-209ENST00000480548 A0A0C4DFX4 3053 aa0.39□□□□□ -2.35
SGIP1-209ENST00000480548 IQGAP2Q13576 1575 aa0.39□□□□□ -2.35
SGIP1-209ENST00000480548 TACC2O95359 2948 aa0.39□□□□□ -2.35
SGIP1-209ENST00000480548 MTORP42345 2549 aa0.38□□□□□ -2.35
SGIP1-209ENST00000480548 SONP18583 2426 aaKnown RBP0.37□□□□□ -2.35
SGIP1-209ENST00000480548 LRP2P98164 4655 aa0.37□□□□□ -2.35
SGIP1-209ENST00000480548 DNAH9Q9NYC9 4486 aa0.37□□□□□ -2.35
SGIP1-209ENST00000480548 PKHD1P08F94 4074 aa0.37□□□□□ -2.35
SGIP1-209ENST00000480548 FLGP20930 4061 aaPredicted RBP0.37□□□□□ -2.35
SGIP1-209ENST00000480548 HTTP42858 3142 aa0.36□□□□□ -2.35
SGIP1-209ENST00000480548 KALRNO60229 2985 aa0.36□□□□□ -2.35
SGIP1-209ENST00000480548 UTP20O75691 2785 aaKnown RBP0.36□□□□□ -2.35
SGIP1-209ENST00000480548 SPG11Q96JI7 2443 aa0.36□□□□□ -2.35
SGIP1-209ENST00000480548 ANKRD11Q6UB99 2663 aaPredicted RBP0.36□□□□□ -2.35
SGIP1-209ENST00000480548 SACSQ9NZJ4 4579 aa0.36□□□□□ -2.35
SGIP1-209ENST00000480548 SETD2Q9BYW2 2564 aaPredicted RBP0.36□□□□□ -2.35
SGIP1-209ENST00000480548 SPRR2AP35326 72 aa0.35□□□□□ -2.35
SGIP1-209ENST00000480548 KRTAP6-2Q3LI66 62 aa0.35□□□□□ -2.35
SGIP1-209ENST00000480548 LRRK2Q5S007 2527 aa0.35□□□□□ -2.35
SGIP1-209ENST00000480548 ZANQ9Y493 2812 aa0.34□□□□□ -2.35
SGIP1-209ENST00000480548 MMP24-AS1A0A0U1RRL7 71 aa0.34□□□□□ -2.36
SGIP1-209ENST00000480548 STAB1Q9NY15 2570 aa0.34□□□□□ -2.36
SGIP1-209ENST00000480548 NFAT5O94916 1531 aa0.33□□□□□ -2.36
SGIP1-209ENST00000480548 AKAP9Q99996 3911 aa0.33□□□□□ -2.36
SGIP1-209ENST00000480548 SVEP1Q4LDE5 3571 aa0.33□□□□□ -2.36
SGIP1-209ENST00000480548 M0QY20 66 aa0.32□□□□□ -2.36
SGIP1-209ENST00000480548 FAM208AQ9UK61 1670 aaKnown RBP0.32□□□□□ -2.36
SGIP1-209ENST00000480548 DNAH3Q8TD57 4116 aa0.32□□□□□ -2.36
SGIP1-209ENST00000480548 EPG5Q9HCE0 2579 aa0.31□□□□□ -2.36
SGIP1-209ENST00000480548 NBEAL1Q6ZS30 2694 aa0.3□□□□□ -2.36
SGIP1-209ENST00000480548 DEFB131AP59861 70 aa0.3□□□□□ -2.36
SGIP1-209ENST00000480548 TGP01266 2768 aa0.3□□□□□ -2.36
SGIP1-209ENST00000480548 ANKHD1Q8IWZ3 2542 aaKnown RBP0.3□□□□□ -2.36
SGIP1-209ENST00000480548 NBEAQ8NFP9 2946 aa0.3□□□□□ -2.36
SGIP1-209ENST00000480548 FASNP49327 2511 aaKnown RBP0.29□□□□□ -2.36
SGIP1-209ENST00000480548 DEFB110Q30KQ9 67 aa0.28□□□□□ -2.36
SGIP1-209ENST00000480548 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
SGIP1-209ENST00000480548 NDUFA1O15239 70 aa0.27□□□□□ -2.37
SGIP1-209ENST00000480548 ACACAQ13085 2346 aa0.27□□□□□ -2.37
SGIP1-209ENST00000480548 ANK3Q12955 4377 aaKnown RBP0.27□□□□□ -2.37
SGIP1-209ENST00000480548 STAB2Q8WWQ8 2551 aa0.26□□□□□ -2.37
SGIP1-209ENST00000480548 A8MTW9 85 aa0.26□□□□□ -2.37
SGIP1-209ENST00000480548 HIVEP1P15822 2718 aa0.26□□□□□ -2.37
SGIP1-209ENST00000480548 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
SGIP1-209ENST00000480548 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
SGIP1-209ENST00000480548 FAT3Q8TDW7 4589 aa0.25□□□□□ -2.37
SGIP1-209ENST00000480548 TRPM2O94759 1503 aa0.24□□□□□ -2.37
SGIP1-209ENST00000480548 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
SGIP1-209ENST00000480548 TNP1P09430 55 aa0.24□□□□□ -2.37
SGIP1-209ENST00000480548 NBEAL2Q6ZNJ1 2754 aa0.24□□□□□ -2.37
SGIP1-209ENST00000480548 RANBP2P49792 3224 aaKnown RBP0.24□□□□□ -2.37
SGIP1-209ENST00000480548 APOBP04114 4563 aaKnown RBP0.23□□□□□ -2.37
SGIP1-209ENST00000480548 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
SGIP1-209ENST00000480548 M0QZ58 72 aa0.22□□□□□ -2.37
SGIP1-209ENST00000480548 MT1AP04731 61 aa0.22□□□□□ -2.37
SGIP1-209ENST00000480548 SPENQ96T58 3664 aaKnown RBP0.22□□□□□ -2.37
SGIP1-209ENST00000480548 DNAH11Q96DT5 4516 aa0.21□□□□□ -2.38
SGIP1-209ENST00000480548 FAM186AA6NE01 2351 aa0.21□□□□□ -2.38
SGIP1-209ENST00000480548 DNAH2Q9P225 4427 aa0.2□□□□□ -2.38
SGIP1-209ENST00000480548 SPRR2EP22531 72 aa0.2□□□□□ -2.38
SGIP1-209ENST00000480548 TEP1Q99973 2627 aaKnown RBP0.19□□□□□ -2.38
SGIP1-209ENST00000480548 NBPF19A0A087WUL8 3843 aa0.17□□□□□ -2.38
SGIP1-209ENST00000480548 CLTCL1P53675 1640 aa0.17□□□□□ -2.38
SGIP1-209ENST00000480548 COL12A1Q99715 3063 aa0.17□□□□□ -2.38
SGIP1-209ENST00000480548 MYO18BQ8IUG5 2567 aa0.17□□□□□ -2.38
SGIP1-209ENST00000480548 WDR87Q6ZQQ6 2873 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms