RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 KRTAP16-1A8MUX0 517 aa2.73□□□□□ -1.97
HDAC6-223ENST00000480525 A8MWP4 228 aa2.73□□□□□ -1.97
HDAC6-223ENST00000480525 IGKV4-1P06312 121 aa2.73□□□□□ -1.97
HDAC6-223ENST00000480525 SMCPP49901 116 aaPredicted RBP2.73□□□□□ -1.97
HDAC6-223ENST00000480525 LINC00313P59037 77 aa2.73□□□□□ -1.97
HDAC6-223ENST00000480525 ACYP1P07311 99 aa2.72□□□□□ -1.97
HDAC6-223ENST00000480525 Q8N9P0 234 aaPredicted RBP2.72□□□□□ -1.97
HDAC6-223ENST00000480525 SIGMAR1Q99720 223 aa2.72□□□□□ -1.97
HDAC6-223ENST00000480525 NREPQ16612 68 aa2.71□□□□□ -1.98
HDAC6-223ENST00000480525 ATP11AUNQ6ZP68 121 aa2.71□□□□□ -1.98
HDAC6-223ENST00000480525 PRR15Q8IV56 129 aa2.71□□□□□ -1.98
HDAC6-223ENST00000480525 VPS25Q9BRG1 176 aa2.71□□□□□ -1.98
HDAC6-223ENST00000480525 C9orf92A6NGG3 77 aa2.7□□□□□ -1.98
HDAC6-223ENST00000480525 CXCL6P80162 114 aa2.7□□□□□ -1.98
HDAC6-223ENST00000480525 UBL5Q9BZL1 73 aa2.7□□□□□ -1.98
HDAC6-223ENST00000480525 DSCR10P59022 87 aa2.69□□□□□ -1.98
HDAC6-223ENST00000480525 LCE2AQ5TA79 106 aaPredicted RBP2.69□□□□□ -1.98
HDAC6-223ENST00000480525 ATP5EP2Q5VTU8 51 aa2.69□□□□□ -1.98
HDAC6-223ENST00000480525 Q6ZVQ6 151 aa2.69□□□□□ -1.98
HDAC6-223ENST00000480525 TMEM254Q8TBM7 123 aa2.69□□□□□ -1.98
HDAC6-223ENST00000480525 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
HDAC6-223ENST00000480525 IGKV3D-7A0A0C4DH55 119 aa2.68□□□□□ -1.98
HDAC6-223ENST00000480525 A0A1B0GV72 72 aa2.68□□□□□ -1.98
HDAC6-223ENST00000480525 BPY2O14599 106 aa2.68□□□□□ -1.98
HDAC6-223ENST00000480525 ETDBQ3ZM63 59 aa2.68□□□□□ -1.98
HDAC6-223ENST00000480525 PCOTHQ58A44 107 aa2.68□□□□□ -1.98
HDAC6-223ENST00000480525 MTURNQ8N3F0 131 aa2.68□□□□□ -1.98
HDAC6-223ENST00000480525 C8orf17Q9NRJ1 99 aa2.68□□□□□ -1.98
HDAC6-223ENST00000480525 IGHV6-1A0A0B4J1U7 121 aa2.67□□□□□ -1.98
HDAC6-223ENST00000480525 LINC00846Q9NV44 126 aa2.67□□□□□ -1.98
HDAC6-223ENST00000480525 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
HDAC6-223ENST00000480525 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
HDAC6-223ENST00000480525 MRPL34Q9BQ48 92 aaKnown RBP2.66□□□□□ -1.98
HDAC6-223ENST00000480525 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
HDAC6-223ENST00000480525 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.99
HDAC6-223ENST00000480525 hDV103S1A0JD37 113 aa2.65□□□□□ -1.99
HDAC6-223ENST00000480525 K7EQZ3 153 aa2.65□□□□□ -1.99
HDAC6-223ENST00000480525 SCGB1A1P11684 91 aa2.65□□□□□ -1.99
HDAC6-223ENST00000480525 NOTCH2NLQ7Z3S9 236 aa2.65□□□□□ -1.99
HDAC6-223ENST00000480525 MPLKIPQ8TAP9 179 aa2.65□□□□□ -1.99
HDAC6-223ENST00000480525 ZCCHC13Q8WW36 166 aaKnown RBP2.65□□□□□ -1.99
HDAC6-223ENST00000480525 J3QR89 54 aa2.64□□□□□ -1.99
HDAC6-223ENST00000480525 K7ERU9 68 aa2.64□□□□□ -1.99
HDAC6-223ENST00000480525 DEFB116Q30KQ4 102 aa2.64□□□□□ -1.99
HDAC6-223ENST00000480525 LCE2CQ5TA81 110 aa2.64□□□□□ -1.99
HDAC6-223ENST00000480525 WFDC13Q8IUB5 93 aa2.63□□□□□ -1.99
HDAC6-223ENST00000480525 TP53AIP1Q9HCN2 124 aa2.63□□□□□ -1.99
HDAC6-223ENST00000480525 HCG22E2RYF7 251 aa2.62□□□□□ -1.99
HDAC6-223ENST00000480525 CASC2Q6XLA1 102 aa2.62□□□□□ -1.99
HDAC6-223ENST00000480525 LINC00643Q86TS7 51 aa2.61□□□□□ -1.99
HDAC6-223ENST00000480525 HRES1P13985 223 aa2.6□□□□□ -1.99
HDAC6-223ENST00000480525 RBM12B-AS1Q9P1G2 102 aa2.6□□□□□ -1.99
HDAC6-223ENST00000480525 SPINK7P58062 85 aa2.59□□□□□ -1.99
HDAC6-223ENST00000480525 MT1HP80294 61 aa2.59□□□□□ -1.99
HDAC6-223ENST00000480525 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
HDAC6-223ENST00000480525 IMUPQ9GZP8 106 aa2.58□□□□□ -2
HDAC6-223ENST00000480525 COX6B2Q6YFQ2 88 aa2.57□□□□□ -2
HDAC6-223ENST00000480525 Q8N9L7 120 aa2.57□□□□□ -2
HDAC6-223ENST00000480525 ATOX1O00244 68 aa2.56□□□□□ -2
HDAC6-223ENST00000480525 TRAV22A0A0B4J277 110 aa2.55□□□□□ -2
HDAC6-223ENST00000480525 NDUFS5O43920 106 aa2.55□□□□□ -2
HDAC6-223ENST00000480525 LORP23490 312 aaPredicted RBP2.55□□□□□ -2
HDAC6-223ENST00000480525 Q5W150 140 aa2.55□□□□□ -2
HDAC6-223ENST00000480525 LOC101927531A0A1B0GV80 90 aa2.54□□□□□ -2
HDAC6-223ENST00000480525 UQCRQO14949 82 aa2.54□□□□□ -2
HDAC6-223ENST00000480525 IGKV2-30P06310 120 aa2.54□□□□□ -2
HDAC6-223ENST00000480525 H3BPC8 53 aa2.53□□□□□ -2
HDAC6-223ENST00000480525 KRTAP10-6P60371 365 aaPredicted RBP2.53□□□□□ -2
HDAC6-223ENST00000480525 LCE2DQ5TA82 110 aaPredicted RBP2.53□□□□□ -2
HDAC6-223ENST00000480525 HIST1H4AP62805 103 aaKnown RBP2.52□□□□□ -2.01
HDAC6-223ENST00000480525 SMIM20Q8N5G0 67 aa2.52□□□□□ -2.01
HDAC6-223ENST00000480525 OCR1Q9BZK8 76 aa2.52□□□□□ -2.01
HDAC6-223ENST00000480525 FAM236DA0A1B0GTK5 79 aa2.51□□□□□ -2.01
HDAC6-223ENST00000480525 FAM236CP0DP71 79 aa2.51□□□□□ -2.01
HDAC6-223ENST00000480525 H1FX-AS1Q4G0G2 97 aa2.51□□□□□ -2.01
HDAC6-223ENST00000480525 C5orf47Q569G3 176 aa2.51□□□□□ -2.01
HDAC6-223ENST00000480525 A8MUN3 132 aa2.5□□□□□ -2.01
HDAC6-223ENST00000480525 CYP4F30PQ9H0H9 118 aa2.5□□□□□ -2.01
HDAC6-223ENST00000480525 IGKV2D-30A0A075B6S6 120 aa2.49□□□□□ -2.01
HDAC6-223ENST00000480525 M0R2T5 61 aa2.49□□□□□ -2.01
HDAC6-223ENST00000480525 MP68P56378 58 aa2.48□□□□□ -2.01
HDAC6-223ENST00000480525 ANAPC13Q9BS18 74 aa2.48□□□□□ -2.01
HDAC6-223ENST00000480525 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
HDAC6-223ENST00000480525 A0A087WVE0 104 aa2.47□□□□□ -2.01
HDAC6-223ENST00000480525 H0Y9P7 68 aa2.47□□□□□ -2.01
HDAC6-223ENST00000480525 MT-ATP8P03928 68 aa2.47□□□□□ -2.01
HDAC6-223ENST00000480525 KRTAP9-2Q9BYQ4 174 aa2.47□□□□□ -2.01
HDAC6-223ENST00000480525 TRAV7A0A075B6U4 112 aa2.45□□□□□ -2.02
HDAC6-223ENST00000480525 C4orf26Q17RF5 130 aa2.45□□□□□ -2.02
HDAC6-223ENST00000480525 C1orf64Q8NEQ6 169 aa2.45□□□□□ -2.02
HDAC6-223ENST00000480525 KRTAP3-1Q9BYR8 98 aa2.45□□□□□ -2.02
HDAC6-223ENST00000480525 H0YAA0 97 aa2.44□□□□□ -2.02
HDAC6-223ENST00000480525 CCDC179H3BU77 68 aa2.44□□□□□ -2.02
HDAC6-223ENST00000480525 MT2AP02795 61 aa2.43□□□□□ -2.02
HDAC6-223ENST00000480525 LINC00208Q96KT6 92 aa2.43□□□□□ -2.02
HDAC6-223ENST00000480525 FAM236AA0A1B0GUQ0 79 aa2.42□□□□□ -2.02
HDAC6-223ENST00000480525 FAM236BA0A1B0GV22 79 aa2.42□□□□□ -2.02
HDAC6-223ENST00000480525 CSAG1Q6PB30 78 aa2.42□□□□□ -2.02
HDAC6-223ENST00000480525 S4R3F8 94 aa2.42□□□□□ -2.02
HDAC6-223ENST00000480525 DMAC1Q96GE9 116 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms