RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 Q5VSD8 79 aa15.99■□□□□ 0.15
TNFRSF25-213ENST00000480393 C1orf195Q5TG92 126 aa15.99■□□□□ 0.15
TNFRSF25-213ENST00000480393 SPAG11AQ6PDA7 123 aa15.97■□□□□ 0.15
TNFRSF25-213ENST00000480393 CYSTM1Q9H1C7 97 aa15.96■□□□□ 0.15
TNFRSF25-213ENST00000480393 TMEM254Q8TBM7 123 aa15.95■□□□□ 0.14
TNFRSF25-213ENST00000480393 SNURFQ9Y675 71 aa15.94■□□□□ 0.14
TNFRSF25-213ENST00000480393 KLKP1Q107X0 134 aa15.92■□□□□ 0.14
TNFRSF25-213ENST00000480393 RPS29P62273 56 aaKnown RBP15.91■□□□□ 0.14
TNFRSF25-213ENST00000480393 C8orf87E5RJ46 101 aa15.88■□□□□ 0.13
TNFRSF25-213ENST00000480393 NOTCH2NLQ7Z3S9 236 aa15.88■□□□□ 0.13
TNFRSF25-213ENST00000480393 C5orf47Q569G3 176 aa15.87■□□□□ 0.13
TNFRSF25-213ENST00000480393 MRPL34Q9BQ48 92 aaKnown RBP15.85■□□□□ 0.13
TNFRSF25-213ENST00000480393 PKHD1L1Q86WI1 4243 aa15.85■□□□□ 0.13
TNFRSF25-213ENST00000480393 A0A0U1RQV1 116 aa15.84■□□□□ 0.13
TNFRSF25-213ENST00000480393 HSPG2P98160 4391 aa15.81■□□□□ 0.12
TNFRSF25-213ENST00000480393 NDUFS5O43920 106 aa15.81■□□□□ 0.12
TNFRSF25-213ENST00000480393 RYR1P21817 5038 aa15.8■□□□□ 0.12
TNFRSF25-213ENST00000480393 MP68P56378 58 aa15.79■□□□□ 0.12
TNFRSF25-213ENST00000480393 TMEM258P61165 79 aa15.79■□□□□ 0.12
TNFRSF25-213ENST00000480393 TP53AIP1Q9HCN2 124 aa15.79■□□□□ 0.12
TNFRSF25-213ENST00000480393 LINC00313P59037 77 aa15.78■□□□□ 0.12
TNFRSF25-213ENST00000480393 NDUFC1O43677 76 aa15.77■□□□□ 0.12
TNFRSF25-213ENST00000480393 H0Y9P7 68 aa15.75■□□□□ 0.11
TNFRSF25-213ENST00000480393 H7BZZ5 65 aa15.74■□□□□ 0.11
TNFRSF25-213ENST00000480393 Q8N1X5 172 aa15.71■□□□□ 0.1
TNFRSF25-213ENST00000480393 TRAV22A0A0B4J277 110 aa15.7■□□□□ 0.1
TNFRSF25-213ENST00000480393 KRTAP17-1Q9BYP8 105 aa15.67■□□□□ 0.1
TNFRSF25-213ENST00000480393 H3BPC8 53 aa15.66■□□□□ 0.1
TNFRSF25-213ENST00000480393 ZCCHC13Q8WW36 166 aaKnown RBP15.66■□□□□ 0.1
TNFRSF25-213ENST00000480393 LINC00208Q96KT6 92 aa15.66■□□□□ 0.1
TNFRSF25-213ENST00000480393 EPPK1P58107 5090 aaKnown RBP15.62■□□□□ 0.09
TNFRSF25-213ENST00000480393 KRTAP10-8P60410 259 aa15.61■□□□□ 0.09
TNFRSF25-213ENST00000480393 FAM236DA0A1B0GTK5 79 aa15.6■□□□□ 0.09
TNFRSF25-213ENST00000480393 FAM236CP0DP71 79 aa15.6■□□□□ 0.09
TNFRSF25-213ENST00000480393 C1orf64Q8NEQ6 169 aa15.58■□□□□ 0.08
TNFRSF25-213ENST00000480393 KIAA1109Q2LD37 5005 aa15.57■□□□□ 0.08
TNFRSF25-213ENST00000480393 KRTAP16-1A8MUX0 517 aa15.57■□□□□ 0.08
TNFRSF25-213ENST00000480393 Q8N9P0 234 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF25-213ENST00000480393 RETNLBQ9BQ08 111 aa15.51■□□□□ 0.07
TNFRSF25-213ENST00000480393 ATP5EP56381 51 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF25-213ENST00000480393 Q5W150 140 aa15.44■□□□□ 0.06
TNFRSF25-213ENST00000480393 LRP1Q07954 4544 aaKnown RBP15.41■□□□□ 0.06
TNFRSF25-213ENST00000480393 KRTAP13-3Q3SY46 172 aa15.4■□□□□ 0.06
TNFRSF25-213ENST00000480393 TNXBP22105 4242 aa15.39■□□□□ 0.05
TNFRSF25-213ENST00000480393 FLG2Q5D862 2391 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF25-213ENST00000480393 C9orf92A6NGG3 77 aa15.38■□□□□ 0.05
TNFRSF25-213ENST00000480393 LOC101927531A0A1B0GV80 90 aa15.37■□□□□ 0.05
TNFRSF25-213ENST00000480393 BIRC6Q9NR09 4857 aa15.36■□□□□ 0.05
TNFRSF25-213ENST00000480393 FAT3Q8TDW7 4589 aa15.35■□□□□ 0.05
TNFRSF25-213ENST00000480393 MT1HL1P0DM35 61 aa15.34■□□□□ 0.05
TNFRSF25-213ENST00000480393 PCOTHQ58A44 107 aa15.32■□□□□ 0.04
TNFRSF25-213ENST00000480393 RPS28P62857 69 aaKnown RBP15.31■□□□□ 0.04
TNFRSF25-213ENST00000480393 SERP1Q9Y6X1 66 aa15.3■□□□□ 0.04
TNFRSF25-213ENST00000480393 OXTP01178 125 aa15.28■□□□□ 0.04
TNFRSF25-213ENST00000480393 FP248Q71RG6 208 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF25-213ENST00000480393 SPANXA2-OT1Q8N9U9 137 aa15.27■□□□□ 0.04
TNFRSF25-213ENST00000480393 PRR4Q16378 134 aa15.26■□□□□ 0.03
TNFRSF25-213ENST00000480393 KRTAP4-5Q9BYR2 181 aa15.23■□□□□ 0.03
TNFRSF25-213ENST00000480393 CYP4F30PQ9H0H9 118 aa15.22■□□□□ 0.03
TNFRSF25-213ENST00000480393 C20orf166-AS1Q96NR2 134 aa15.21■□□□□ 0.03
TNFRSF25-213ENST00000480393 A8MUU9 505 aa15.2■□□□□ 0.02
TNFRSF25-213ENST00000480393 IGKV2-30P06310 120 aa15.18■□□□□ 0.02
TNFRSF25-213ENST00000480393 MYCBP2O75592 4640 aa15.15■□□□□ 0.02
TNFRSF25-213ENST00000480393 IGLV7-46A0A075B6I9 117 aa15.14■□□□□ 0.01
TNFRSF25-213ENST00000480393 IGKV2D-30A0A075B6S6 120 aa15.12■□□□□ 0.01
TNFRSF25-213ENST00000480393 DMBT1Q9UGM3 2413 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF25-213ENST00000480393 Q75L30 129 aa15.06■□□□□ 0
TNFRSF25-213ENST00000480393 HRES1P13985 223 aa15□□□□□ -0.01
TNFRSF25-213ENST00000480393 C7orf65Q6ZTY9 151 aa15□□□□□ -0.01
TNFRSF25-213ENST00000480393 HERC2O95714 4834 aa14.96□□□□□ -0.02
TNFRSF25-213ENST00000480393 SMIM26A0A096LP01 95 aa14.92□□□□□ -0.02
TNFRSF25-213ENST00000480393 XP32Q5T750 250 aa14.91□□□□□ -0.02
TNFRSF25-213ENST00000480393 J3QL48 77 aa14.89□□□□□ -0.03
TNFRSF25-213ENST00000480393 ATP11AUNQ6ZP68 121 aa14.88□□□□□ -0.03
TNFRSF25-213ENST00000480393 RPL37P61927 97 aaKnown RBP14.87□□□□□ -0.03
TNFRSF25-213ENST00000480393 COA5Q86WW8 74 aa14.86□□□□□ -0.03
TNFRSF25-213ENST00000480393 ABCA13Q86UQ4 5058 aa14.84□□□□□ -0.03
TNFRSF25-213ENST00000480393 DMAC1Q96GE9 116 aa14.81□□□□□ -0.04
TNFRSF25-213ENST00000480393 TPRXLQ17RH7 258 aa14.79□□□□□ -0.04
TNFRSF25-213ENST00000480393 ACYP2P14621 99 aa14.78□□□□□ -0.04
TNFRSF25-213ENST00000480393 SPINK7P58062 85 aa14.78□□□□□ -0.04
TNFRSF25-213ENST00000480393 MPLKIPQ8TAP9 179 aa14.69□□□□□ -0.06
TNFRSF25-213ENST00000480393 C4orf26Q17RF5 130 aa14.67□□□□□ -0.06
TNFRSF25-213ENST00000480393 CHKB-CPT1BH3BT56 60 aa14.63□□□□□ -0.07
TNFRSF25-213ENST00000480393 A8MUN3 132 aa14.59□□□□□ -0.07
TNFRSF25-213ENST00000480393 PCLOQ9Y6V0 5065 aa14.58□□□□□ -0.08
TNFRSF25-213ENST00000480393 Q1T7F1 81 aa14.55□□□□□ -0.08
TNFRSF25-213ENST00000480393 V9GYY9 64 aa14.52□□□□□ -0.08
TNFRSF25-213ENST00000480393 COX6B2Q6YFQ2 88 aa14.44□□□□□ -0.1
TNFRSF25-213ENST00000480393 KRTAP3-1Q9BYR8 98 aa14.4□□□□□ -0.1
TNFRSF25-213ENST00000480393 PSPHP1O15172 72 aa14.35□□□□□ -0.11
TNFRSF25-213ENST00000480393 LPAP08519 4548 aa14.32□□□□□ -0.12
TNFRSF25-213ENST00000480393 LINC01558Q9Y6Z2 57 aa14.32□□□□□ -0.12
TNFRSF25-213ENST00000480393 SEC61BP60468 96 aaKnown RBP14.31□□□□□ -0.12
TNFRSF25-213ENST00000480393 PRR15LQ9BU68 103 aa14.3□□□□□ -0.12
TNFRSF25-213ENST00000480393 LRP2P98164 4655 aa14.27□□□□□ -0.12
TNFRSF25-213ENST00000480393 SPTSSBQ8NFR3 76 aa14.24□□□□□ -0.13
TNFRSF25-213ENST00000480393 Q5VV11 94 aa14.17□□□□□ -0.14
TNFRSF25-213ENST00000480393 RBM12B-AS1Q9P1G2 102 aa14.12□□□□□ -0.15
TNFRSF25-213ENST00000480393 A0A1B0GU69 56 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms