RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 A8MWP4 228 aa9.87□□□□□ -0.83
UPF3A-206ENST00000480362 Q8N9L7 120 aa9.87□□□□□ -0.83
UPF3A-206ENST00000480362 K7EQZ3 153 aa9.85□□□□□ -0.83
UPF3A-206ENST00000480362 NDUFB1O75438 58 aa9.85□□□□□ -0.83
UPF3A-206ENST00000480362 PRR15Q8IV56 129 aa9.83□□□□□ -0.84
UPF3A-206ENST00000480362 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
UPF3A-206ENST00000480362 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
UPF3A-206ENST00000480362 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
UPF3A-206ENST00000480362 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
UPF3A-206ENST00000480362 IGLV7-46A0A075B6I9 117 aa9.77□□□□□ -0.85
UPF3A-206ENST00000480362 PRR4Q16378 134 aa9.77□□□□□ -0.85
UPF3A-206ENST00000480362 IMUPQ9GZP8 106 aa9.76□□□□□ -0.85
UPF3A-206ENST00000480362 A0A087WVE0 104 aa9.75□□□□□ -0.85
UPF3A-206ENST00000480362 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
UPF3A-206ENST00000480362 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
UPF3A-206ENST00000480362 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
UPF3A-206ENST00000480362 LINC00313P59037 77 aa9.73□□□□□ -0.85
UPF3A-206ENST00000480362 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
UPF3A-206ENST00000480362 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
UPF3A-206ENST00000480362 HCG22E2RYF7 251 aa9.7□□□□□ -0.86
UPF3A-206ENST00000480362 WFDC13Q8IUB5 93 aa9.69□□□□□ -0.86
UPF3A-206ENST00000480362 CASC2Q6XLA1 102 aa9.67□□□□□ -0.86
UPF3A-206ENST00000480362 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
UPF3A-206ENST00000480362 KRTAP13-3Q3SY46 172 aa9.65□□□□□ -0.86
UPF3A-206ENST00000480362 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
UPF3A-206ENST00000480362 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
UPF3A-206ENST00000480362 MRPL34Q9BQ48 92 aaKnown RBP9.62□□□□□ -0.87
UPF3A-206ENST00000480362 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
UPF3A-206ENST00000480362 HERC1Q15751 4861 aa9.61□□□□□ -0.87
UPF3A-206ENST00000480362 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
UPF3A-206ENST00000480362 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
UPF3A-206ENST00000480362 SCGB1A1P11684 91 aa9.55□□□□□ -0.88
UPF3A-206ENST00000480362 Q8N9P0 234 aaPredicted RBP9.55□□□□□ -0.88
UPF3A-206ENST00000480362 NDUFS5O43920 106 aa9.54□□□□□ -0.88
UPF3A-206ENST00000480362 XP32Q5T750 250 aa9.54□□□□□ -0.88
UPF3A-206ENST00000480362 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
UPF3A-206ENST00000480362 A8MUU9 505 aa9.52□□□□□ -0.89
UPF3A-206ENST00000480362 Q75L30 129 aa9.48□□□□□ -0.89
UPF3A-206ENST00000480362 ATOX1O00244 68 aa9.47□□□□□ -0.89
UPF3A-206ENST00000480362 OCR1Q9BZK8 76 aa9.46□□□□□ -0.9
UPF3A-206ENST00000480362 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.9
UPF3A-206ENST00000480362 RPL37P61927 97 aaKnown RBP9.45□□□□□ -0.9
UPF3A-206ENST00000480362 SMIM20Q8N5G0 67 aa9.42□□□□□ -0.9
UPF3A-206ENST00000480362 UQCRQO14949 82 aa9.41□□□□□ -0.9
UPF3A-206ENST00000480362 LPAP08519 4548 aa9.41□□□□□ -0.9
UPF3A-206ENST00000480362 TRAV7A0A075B6U4 112 aa9.4□□□□□ -0.9
UPF3A-206ENST00000480362 HMCN2Q8NDA2 5059 aa9.39□□□□□ -0.91
UPF3A-206ENST00000480362 ZCCHC13Q8WW36 166 aaKnown RBP9.39□□□□□ -0.91
UPF3A-206ENST00000480362 Q5W150 140 aa9.38□□□□□ -0.91
UPF3A-206ENST00000480362 ATP11AUNQ6ZP68 121 aa9.38□□□□□ -0.91
UPF3A-206ENST00000480362 SERP2Q8N6R1 65 aa9.35□□□□□ -0.91
UPF3A-206ENST00000480362 ANAPC13Q9BS18 74 aa9.34□□□□□ -0.91
UPF3A-206ENST00000480362 TRAV22A0A0B4J277 110 aa9.33□□□□□ -0.92
UPF3A-206ENST00000480362 C5orf47Q569G3 176 aa9.33□□□□□ -0.92
UPF3A-206ENST00000480362 H0Y9P7 68 aa9.32□□□□□ -0.92
UPF3A-206ENST00000480362 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
UPF3A-206ENST00000480362 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
UPF3A-206ENST00000480362 MP68P56378 58 aa9.28□□□□□ -0.92
UPF3A-206ENST00000480362 COX7CP15954 63 aa9.27□□□□□ -0.93
UPF3A-206ENST00000480362 LRP2P98164 4655 aa9.27□□□□□ -0.93
UPF3A-206ENST00000480362 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
UPF3A-206ENST00000480362 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
UPF3A-206ENST00000480362 H3BPC8 53 aa9.22□□□□□ -0.93
UPF3A-206ENST00000480362 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.94
UPF3A-206ENST00000480362 IGKV2-30P06310 120 aa9.21□□□□□ -0.94
UPF3A-206ENST00000480362 A0A0U1RQV1 116 aa9.19□□□□□ -0.94
UPF3A-206ENST00000480362 LOC101927531A0A1B0GV80 90 aa9.19□□□□□ -0.94
UPF3A-206ENST00000480362 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
UPF3A-206ENST00000480362 SPINK7P58062 85 aa9.18□□□□□ -0.94
UPF3A-206ENST00000480362 MUC17Q685J3 4493 aa9.17□□□□□ -0.94
UPF3A-206ENST00000480362 C7orf65Q6ZTY9 151 aa9.16□□□□□ -0.94
UPF3A-206ENST00000480362 CYP4F30PQ9H0H9 118 aa9.16□□□□□ -0.94
UPF3A-206ENST00000480362 SNURFQ9Y675 71 aa9.16□□□□□ -0.94
UPF3A-206ENST00000480362 CCDC179H3BU77 68 aa9.14□□□□□ -0.95
UPF3A-206ENST00000480362 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
UPF3A-206ENST00000480362 KLKP1Q107X0 134 aa9.1□□□□□ -0.95
UPF3A-206ENST00000480362 PCP4P48539 62 aa9.09□□□□□ -0.95
UPF3A-206ENST00000480362 UBR4Q5T4S7 5183 aa9.06□□□□□ -0.96
UPF3A-206ENST00000480362 HRES1P13985 223 aa9.04□□□□□ -0.96
UPF3A-206ENST00000480362 CYSTM1Q9H1C7 97 aa9.04□□□□□ -0.96
UPF3A-206ENST00000480362 NDUFC1O43677 76 aa8.99□□□□□ -0.97
UPF3A-206ENST00000480362 LCE2BO14633 110 aa8.98□□□□□ -0.97
UPF3A-206ENST00000480362 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
UPF3A-206ENST00000480362 H7BZZ5 65 aa8.96□□□□□ -0.98
UPF3A-206ENST00000480362 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
UPF3A-206ENST00000480362 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
UPF3A-206ENST00000480362 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
UPF3A-206ENST00000480362 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
UPF3A-206ENST00000480362 RNF213Q63HN8 5207 aa8.87□□□□□ -0.99
UPF3A-206ENST00000480362 KRTAP3-1Q9BYR8 98 aa8.86□□□□□ -0.99
UPF3A-206ENST00000480362 FAM236DA0A1B0GTK5 79 aa8.85□□□□□ -0.99
UPF3A-206ENST00000480362 FAM236CP0DP71 79 aa8.85□□□□□ -0.99
UPF3A-206ENST00000480362 KRTAP19-2Q3LHN2 52 aa8.82□□□□□ -1
UPF3A-206ENST00000480362 DMAC1Q96GE9 116 aa8.81□□□□□ -1
UPF3A-206ENST00000480362 A8MUN3 132 aa8.79□□□□□ -1
UPF3A-206ENST00000480362 TMEM258P61165 79 aa8.79□□□□□ -1
UPF3A-206ENST00000480362 MUC2Q02817 5179 aa8.79□□□□□ -1
UPF3A-206ENST00000480362 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
UPF3A-206ENST00000480362 ACYP2P14621 99 aa8.75□□□□□ -1.01
UPF3A-206ENST00000480362 ATP5EP56381 51 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 285.6 ms