RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 PTPN13Q12923 2485 aa2.23□□□□□ -2.05
PBRM1-220ENST00000480064 DEFB135Q30KP9 77 aa2.22□□□□□ -2.05
PBRM1-220ENST00000480064 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
PBRM1-220ENST00000480064 COL6A6A6NMZ7 2263 aa2.22□□□□□ -2.05
PBRM1-220ENST00000480064 ACACAQ13085 2346 aa2.22□□□□□ -2.05
PBRM1-220ENST00000480064 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.22□□□□□ -2.05
PBRM1-220ENST00000480064 TTC28Q96AY4 2481 aa2.22□□□□□ -2.05
PBRM1-220ENST00000480064 HECTD1Q9ULT8 2610 aa2.21□□□□□ -2.05
PBRM1-220ENST00000480064 M0QZ58 72 aa2.21□□□□□ -2.06
PBRM1-220ENST00000480064 USP34Q70CQ2 3546 aa2.21□□□□□ -2.06
PBRM1-220ENST00000480064 AKAP6Q13023 2319 aa2.2□□□□□ -2.06
PBRM1-220ENST00000480064 WDFY4Q6ZS81 3184 aa2.2□□□□□ -2.06
PBRM1-220ENST00000480064 CELSR3Q9NYQ7 3312 aa2.2□□□□□ -2.06
PBRM1-220ENST00000480064 PCNX1Q96RV3 2341 aa2.19□□□□□ -2.06
PBRM1-220ENST00000480064 MYO9AB2RTY4 2548 aa2.19□□□□□ -2.06
PBRM1-220ENST00000480064 LAMA3Q16787 3333 aa2.19□□□□□ -2.06
PBRM1-220ENST00000480064 CEP290O15078 2479 aa2.18□□□□□ -2.06
PBRM1-220ENST00000480064 EP300Q09472 2414 aaPredicted RBP2.18□□□□□ -2.06
PBRM1-220ENST00000480064 CACNA1HO95180 2353 aa2.18□□□□□ -2.06
PBRM1-220ENST00000480064 ROS1P08922 2347 aa2.18□□□□□ -2.06
PBRM1-220ENST00000480064 PTPRZ1P23471 2315 aaPredicted RBP2.18□□□□□ -2.06
PBRM1-220ENST00000480064 ZZEF1O43149 2961 aa2.17□□□□□ -2.06
PBRM1-220ENST00000480064 SPTA1P02549 2419 aa2.17□□□□□ -2.06
PBRM1-220ENST00000480064 XIRP2A4UGR9 3374 aa2.17□□□□□ -2.06
PBRM1-220ENST00000480064 RELNP78509 3460 aa2.17□□□□□ -2.06
PBRM1-220ENST00000480064 MGAQ8IWI9 3026 aa2.17□□□□□ -2.06
PBRM1-220ENST00000480064 ABCA12Q86UK0 2595 aa2.16□□□□□ -2.06
PBRM1-220ENST00000480064 ASPMQ8IZT6 3477 aa2.16□□□□□ -2.06
PBRM1-220ENST00000480064 MUC6Q6W4X9 2439 aa2.16□□□□□ -2.06
PBRM1-220ENST00000480064 DEFB4AO15263 64 aa2.16□□□□□ -2.06
PBRM1-220ENST00000480064 RPS29P62273 56 aaKnown RBP2.16□□□□□ -2.06
PBRM1-220ENST00000480064 REV3LO60673 3130 aa2.16□□□□□ -2.06
PBRM1-220ENST00000480064 NCOR1O75376 2440 aa2.16□□□□□ -2.06
PBRM1-220ENST00000480064 A0A0D9SG42 100 aa2.15□□□□□ -2.07
PBRM1-220ENST00000480064 FBN3Q75N90 2809 aa2.15□□□□□ -2.07
PBRM1-220ENST00000480064 C2CD3Q4AC94 2353 aa2.14□□□□□ -2.07
PBRM1-220ENST00000480064 CFAP46Q8IYW2 2715 aa2.13□□□□□ -2.07
PBRM1-220ENST00000480064 CREBBPQ92793 2442 aa2.12□□□□□ -2.07
PBRM1-220ENST00000480064 HELZ2Q9BYK8 2649 aaKnown RBP2.12□□□□□ -2.07
PBRM1-220ENST00000480064 SETD2Q9BYW2 2564 aaPredicted RBP2.11□□□□□ -2.07
PBRM1-220ENST00000480064 FRYQ5TBA9 3013 aa2.11□□□□□ -2.07
PBRM1-220ENST00000480064 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
PBRM1-220ENST00000480064 FAM208BQ5VWN6 2430 aa2.1□□□□□ -2.07
PBRM1-220ENST00000480064 IGF2RP11717 2491 aa2.1□□□□□ -2.07
PBRM1-220ENST00000480064 Q5VSD8 79 aa2.1□□□□□ -2.07
PBRM1-220ENST00000480064 DNHD1Q96M86 4753 aa2.09□□□□□ -2.08
PBRM1-220ENST00000480064 ABCA2Q9BZC7 2435 aa2.09□□□□□ -2.08
PBRM1-220ENST00000480064 CSPG4Q6UVK1 2322 aa2.08□□□□□ -2.08
PBRM1-220ENST00000480064 BOD1L1Q8NFC6 3051 aa2.08□□□□□ -2.08
PBRM1-220ENST00000480064 ANKHD1Q8IWZ3 2542 aaKnown RBP2.08□□□□□ -2.08
PBRM1-220ENST00000480064 CDH23Q9H251 3354 aa2.08□□□□□ -2.08
PBRM1-220ENST00000480064 TEX15Q9BXT5 2789 aa2.07□□□□□ -2.08
PBRM1-220ENST00000480064 TENM2Q9NT68 2774 aa2.07□□□□□ -2.08
PBRM1-220ENST00000480064 NBEAQ8NFP9 2946 aa2.07□□□□□ -2.08
PBRM1-220ENST00000480064 VPS13AQ96RL7 3174 aa2.07□□□□□ -2.08
PBRM1-220ENST00000480064 DNAH14Q0VDD8 3507 aa2.07□□□□□ -2.08
PBRM1-220ENST00000480064 ZFYVE26Q68DK2 2539 aa2.07□□□□□ -2.08
PBRM1-220ENST00000480064 CHD7Q9P2D1 2997 aa2.06□□□□□ -2.08
PBRM1-220ENST00000480064 DMXL1Q9Y485 3027 aa2.05□□□□□ -2.08
PBRM1-220ENST00000480064 SPG11Q96JI7 2443 aa2.05□□□□□ -2.08
PBRM1-220ENST00000480064 ACACBO00763 2458 aa2.05□□□□□ -2.08
PBRM1-220ENST00000480064 PIEZO2Q9H5I5 2752 aa2.04□□□□□ -2.08
PBRM1-220ENST00000480064 NBASA2RRP1 2371 aa2.04□□□□□ -2.08
PBRM1-220ENST00000480064 KRTAP10-4P60372 401 aaPredicted RBP2.04□□□□□ -2.08
PBRM1-220ENST00000480064 SMG1Q96Q15 3661 aaKnown RBP2.04□□□□□ -2.08
PBRM1-220ENST00000480064 POLQO75417 2590 aa2.04□□□□□ -2.08
PBRM1-220ENST00000480064 GVINP1Q7Z2Y8 2422 aa2.03□□□□□ -2.08
PBRM1-220ENST00000480064 LOC400499M0QZD8 3231 aa2.03□□□□□ -2.08
PBRM1-220ENST00000480064 FBN2P35556 2912 aa2.03□□□□□ -2.08
PBRM1-220ENST00000480064 UBR5O95071 2799 aaPredicted RBP2.02□□□□□ -2.09
PBRM1-220ENST00000480064 MYO15AQ9UKN7 3530 aa2.01□□□□□ -2.09
PBRM1-220ENST00000480064 SPTAN1Q13813 2472 aaKnown RBP2.01□□□□□ -2.09
PBRM1-220ENST00000480064 PDZD2O15018 2839 aa2.01□□□□□ -2.09
PBRM1-220ENST00000480064 MAP1AP78559 2803 aaPredicted RBP2.01□□□□□ -2.09
PBRM1-220ENST00000480064 TENM4Q6N022 2769 aa2.01□□□□□ -2.09
PBRM1-220ENST00000480064 FRYLO94915 3013 aa2.01□□□□□ -2.09
PBRM1-220ENST00000480064 DMDP11532 3685 aa1.99□□□□□ -2.09
PBRM1-220ENST00000480064 COL12A1Q99715 3063 aa1.99□□□□□ -2.09
PBRM1-220ENST00000480064 ITPR1Q14643 2758 aa1.99□□□□□ -2.09
PBRM1-220ENST00000480064 PKD1L1Q8TDX9 2849 aa1.99□□□□□ -2.09
PBRM1-220ENST00000480064 CELSR1Q9NYQ6 3014 aa1.99□□□□□ -2.09
PBRM1-220ENST00000480064 OTOGLQ3ZCN5 2332 aa1.99□□□□□ -2.09
PBRM1-220ENST00000480064 NCOR2Q9Y618 2525 aa1.98□□□□□ -2.09
PBRM1-220ENST00000480064 AKAP13Q12802 2813 aa1.98□□□□□ -2.09
PBRM1-220ENST00000480064 FREM2Q5SZK8 3169 aa1.98□□□□□ -2.09
PBRM1-220ENST00000480064 NBEAL2Q6ZNJ1 2754 aa1.98□□□□□ -2.09
PBRM1-220ENST00000480064 F8P00451 2351 aa1.98□□□□□ -2.09
PBRM1-220ENST00000480064 NOTCH1P46531 2555 aa1.97□□□□□ -2.09
PBRM1-220ENST00000480064 TRIOO75962 3097 aa1.97□□□□□ -2.09
PBRM1-220ENST00000480064 TNP1P09430 55 aa1.96□□□□□ -2.1
PBRM1-220ENST00000480064 CELSR2Q9HCU4 2923 aa1.95□□□□□ -2.1
PBRM1-220ENST00000480064 ATRQ13535 2644 aa1.95□□□□□ -2.1
PBRM1-220ENST00000480064 FLNCQ14315 2725 aa1.95□□□□□ -2.1
PBRM1-220ENST00000480064 CRYBG3Q68DQ2 2970 aa1.95□□□□□ -2.1
PBRM1-220ENST00000480064 RYR1P21817 5038 aa1.95□□□□□ -2.1
PBRM1-220ENST00000480064 WDFY3Q8IZQ1 3526 aa1.95□□□□□ -2.1
PBRM1-220ENST00000480064 C9orf92A6NGG3 77 aa1.94□□□□□ -2.1
PBRM1-220ENST00000480064 OTOGQ6ZRI0 2925 aa1.94□□□□□ -2.1
PBRM1-220ENST00000480064 NBPF19A0A087WUL8 3843 aa1.93□□□□□ -2.1
PBRM1-220ENST00000480064 HIVEP3Q5T1R4 2406 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms