RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
CLDN18-203ENST00000479660 A0A1B0GVX0 72 aa8.28□□□□□ -1.08
CLDN18-203ENST00000479660 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
CLDN18-203ENST00000479660 OCR1Q9BZK8 76 aa8.28□□□□□ -1.08
CLDN18-203ENST00000479660 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.09
CLDN18-203ENST00000479660 KIAA1109Q2LD37 5005 aa8.27□□□□□ -1.09
CLDN18-203ENST00000479660 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
CLDN18-203ENST00000479660 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
CLDN18-203ENST00000479660 SPAG11AQ6PDA7 123 aa8.27□□□□□ -1.09
CLDN18-203ENST00000479660 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.09
CLDN18-203ENST00000479660 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
CLDN18-203ENST00000479660 hDV103S1A0JD37 113 aa8.24□□□□□ -1.09
CLDN18-203ENST00000479660 KRTAP17-1Q9BYP8 105 aa8.24□□□□□ -1.09
CLDN18-203ENST00000479660 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
CLDN18-203ENST00000479660 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
CLDN18-203ENST00000479660 C20orf197Q8N268 126 aa8.21□□□□□ -1.1
CLDN18-203ENST00000479660 Q8N1X5 172 aa8.2□□□□□ -1.1
CLDN18-203ENST00000479660 LRP1Q07954 4544 aaKnown RBP8.2□□□□□ -1.1
CLDN18-203ENST00000479660 PRO0628Q9UI54 55 aa8.18□□□□□ -1.1
CLDN18-203ENST00000479660 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
CLDN18-203ENST00000479660 OXTP01178 125 aa8.16□□□□□ -1.1
CLDN18-203ENST00000479660 TMEM254Q8TBM7 123 aa8.16□□□□□ -1.1
CLDN18-203ENST00000479660 MRPL34Q9BQ48 92 aaKnown RBP8.16□□□□□ -1.1
CLDN18-203ENST00000479660 TNXBP22105 4242 aa8.16□□□□□ -1.1
CLDN18-203ENST00000479660 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
CLDN18-203ENST00000479660 LINC00313P59037 77 aa8.15□□□□□ -1.11
CLDN18-203ENST00000479660 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
CLDN18-203ENST00000479660 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
CLDN18-203ENST00000479660 FAT3Q8TDW7 4589 aa8.13□□□□□ -1.11
CLDN18-203ENST00000479660 NDUFS5O43920 106 aa8.13□□□□□ -1.11
CLDN18-203ENST00000479660 SEC61GP60059 68 aa8.13□□□□□ -1.11
CLDN18-203ENST00000479660 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
CLDN18-203ENST00000479660 A0A0U1RQV1 116 aa8.1□□□□□ -1.11
CLDN18-203ENST00000479660 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
CLDN18-203ENST00000479660 MP68P56378 58 aa8.08□□□□□ -1.12
CLDN18-203ENST00000479660 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
CLDN18-203ENST00000479660 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
CLDN18-203ENST00000479660 FAM236CP0DP71 79 aa8.07□□□□□ -1.12
CLDN18-203ENST00000479660 MYCBP2O75592 4640 aa8.07□□□□□ -1.12
CLDN18-203ENST00000479660 H0Y9P7 68 aa8.07□□□□□ -1.12
CLDN18-203ENST00000479660 TRAV22A0A0B4J277 110 aa8.05□□□□□ -1.12
CLDN18-203ENST00000479660 H7BZZ5 65 aa8.05□□□□□ -1.12
CLDN18-203ENST00000479660 RETNLBQ9BQ08 111 aa8.05□□□□□ -1.12
CLDN18-203ENST00000479660 V9GYY9 64 aa8.05□□□□□ -1.12
CLDN18-203ENST00000479660 NDUFC1O43677 76 aa8.04□□□□□ -1.12
CLDN18-203ENST00000479660 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
CLDN18-203ENST00000479660 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
CLDN18-203ENST00000479660 LINC00208Q96KT6 92 aa8.03□□□□□ -1.12
CLDN18-203ENST00000479660 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
CLDN18-203ENST00000479660 ZCCHC13Q8WW36 166 aaKnown RBP8.03□□□□□ -1.12
CLDN18-203ENST00000479660 H3BPC8 53 aa8.02□□□□□ -1.13
CLDN18-203ENST00000479660 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
CLDN18-203ENST00000479660 KRTAP4-5Q9BYR2 181 aa8.01□□□□□ -1.13
CLDN18-203ENST00000479660 MT1HL1P0DM35 61 aa8□□□□□ -1.13
CLDN18-203ENST00000479660 C1orf64Q8NEQ6 169 aa7.99□□□□□ -1.13
CLDN18-203ENST00000479660 Q5W150 140 aa7.98□□□□□ -1.13
CLDN18-203ENST00000479660 C9orf92A6NGG3 77 aa7.96□□□□□ -1.13
CLDN18-203ENST00000479660 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.14
CLDN18-203ENST00000479660 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
CLDN18-203ENST00000479660 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
CLDN18-203ENST00000479660 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
CLDN18-203ENST00000479660 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
CLDN18-203ENST00000479660 LOC101927531A0A1B0GV80 90 aa7.88□□□□□ -1.15
CLDN18-203ENST00000479660 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
CLDN18-203ENST00000479660 HERC2O95714 4834 aa7.87□□□□□ -1.15
CLDN18-203ENST00000479660 PCOTHQ58A44 107 aa7.86□□□□□ -1.15
CLDN18-203ENST00000479660 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
CLDN18-203ENST00000479660 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
CLDN18-203ENST00000479660 A8MUU9 505 aa7.86□□□□□ -1.15
CLDN18-203ENST00000479660 CYP4F30PQ9H0H9 118 aa7.84□□□□□ -1.15
CLDN18-203ENST00000479660 PRR4Q16378 134 aa7.81□□□□□ -1.16
CLDN18-203ENST00000479660 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
CLDN18-203ENST00000479660 IGKV2-30P06310 120 aa7.81□□□□□ -1.16
CLDN18-203ENST00000479660 Q75L30 129 aa7.79□□□□□ -1.16
CLDN18-203ENST00000479660 IGKV2D-30A0A075B6S6 120 aa7.78□□□□□ -1.16
CLDN18-203ENST00000479660 J3QL48 77 aa7.76□□□□□ -1.17
CLDN18-203ENST00000479660 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
CLDN18-203ENST00000479660 XP32Q5T750 250 aa7.73□□□□□ -1.17
CLDN18-203ENST00000479660 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
CLDN18-203ENST00000479660 HRES1P13985 223 aa7.71□□□□□ -1.17
CLDN18-203ENST00000479660 BRK1Q8WUW1 75 aa7.71□□□□□ -1.18
CLDN18-203ENST00000479660 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
CLDN18-203ENST00000479660 ATP11AUNQ6ZP68 121 aa7.69□□□□□ -1.18
CLDN18-203ENST00000479660 MPLKIPQ8TAP9 179 aa7.69□□□□□ -1.18
CLDN18-203ENST00000479660 TPRXLQ17RH7 258 aa7.68□□□□□ -1.18
CLDN18-203ENST00000479660 SPINK7P58062 85 aa7.64□□□□□ -1.19
CLDN18-203ENST00000479660 LPAP08519 4548 aa7.64□□□□□ -1.19
CLDN18-203ENST00000479660 LRP2P98164 4655 aa7.61□□□□□ -1.19
CLDN18-203ENST00000479660 Q1T7F1 81 aa7.6□□□□□ -1.19
CLDN18-203ENST00000479660 COA5Q86WW8 74 aa7.6□□□□□ -1.19
CLDN18-203ENST00000479660 DMAC1Q96GE9 116 aa7.6□□□□□ -1.19
CLDN18-203ENST00000479660 ACYP2P14621 99 aa7.59□□□□□ -1.19
CLDN18-203ENST00000479660 PCLOQ9Y6V0 5065 aa7.53□□□□□ -1.2
CLDN18-203ENST00000479660 A8MUN3 132 aa7.49□□□□□ -1.21
CLDN18-203ENST00000479660 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
CLDN18-203ENST00000479660 PSPHP1O15172 72 aa7.46□□□□□ -1.22
CLDN18-203ENST00000479660 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
CLDN18-203ENST00000479660 HERC1Q15751 4861 aa7.44□□□□□ -1.22
CLDN18-203ENST00000479660 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
CLDN18-203ENST00000479660 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms