RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 SIGMAR1Q99720 223 aa6.66□□□□□ -1.34
ABCF1-206ENST00000479542 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
ABCF1-206ENST00000479542 IGKV4-1P06312 121 aa6.65□□□□□ -1.34
ABCF1-206ENST00000479542 BAALC-AS2P0C853 105 aa6.65□□□□□ -1.34
ABCF1-206ENST00000479542 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
ABCF1-206ENST00000479542 NAA38Q9BRA0 125 aaKnown RBP6.65□□□□□ -1.34
ABCF1-206ENST00000479542 RBM3P98179 157 aaKnown RBP6.64□□□□□ -1.35
ABCF1-206ENST00000479542 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
ABCF1-206ENST00000479542 MT1FP04733 61 aa6.63□□□□□ -1.35
ABCF1-206ENST00000479542 DEFB116Q30KQ4 102 aa6.63□□□□□ -1.35
ABCF1-206ENST00000479542 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
ABCF1-206ENST00000479542 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
ABCF1-206ENST00000479542 LINC00313P59037 77 aa6.62□□□□□ -1.35
ABCF1-206ENST00000479542 DSCR8Q96T75 97 aa6.62□□□□□ -1.35
ABCF1-206ENST00000479542 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
ABCF1-206ENST00000479542 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
ABCF1-206ENST00000479542 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
ABCF1-206ENST00000479542 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
ABCF1-206ENST00000479542 HRES1P13985 223 aa6.6□□□□□ -1.35
ABCF1-206ENST00000479542 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
ABCF1-206ENST00000479542 C9JAW5 83 aa6.59□□□□□ -1.35
ABCF1-206ENST00000479542 TSTD3H0UI37 97 aa6.59□□□□□ -1.35
ABCF1-206ENST00000479542 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
ABCF1-206ENST00000479542 LINC00846Q9NV44 126 aa6.59□□□□□ -1.35
ABCF1-206ENST00000479542 IGHV6-1A0A0B4J1U7 121 aa6.56□□□□□ -1.36
ABCF1-206ENST00000479542 JMJD7-PLA2G4BH0Y9G9 81 aa6.55□□□□□ -1.36
ABCF1-206ENST00000479542 BATFQ16520 125 aa6.55□□□□□ -1.36
ABCF1-206ENST00000479542 A0A1B0GVX0 72 aa6.54□□□□□ -1.36
ABCF1-206ENST00000479542 Q6ZQT0 140 aa6.54□□□□□ -1.36
ABCF1-206ENST00000479542 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
ABCF1-206ENST00000479542 LOC110117498A0A087WWA1 95 aa6.53□□□□□ -1.36
ABCF1-206ENST00000479542 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
ABCF1-206ENST00000479542 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
ABCF1-206ENST00000479542 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
ABCF1-206ENST00000479542 C8orf87E5RJ46 101 aa6.51□□□□□ -1.37
ABCF1-206ENST00000479542 J3KT08 172 aa6.51□□□□□ -1.37
ABCF1-206ENST00000479542 MACF1Q9UPN3 7388 aaKnown RBP6.51□□□□□ -1.37
ABCF1-206ENST00000479542 PDE6GP18545 87 aa6.5□□□□□ -1.37
ABCF1-206ENST00000479542 C14orf132Q9NPU4 83 aa6.5□□□□□ -1.37
ABCF1-206ENST00000479542 A0A1B0GW54 56 aa6.49□□□□□ -1.37
ABCF1-206ENST00000479542 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
ABCF1-206ENST00000479542 TAX1BP3O14907 124 aa6.48□□□□□ -1.37
ABCF1-206ENST00000479542 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
ABCF1-206ENST00000479542 A0A1W2PPM0 123 aa6.45□□□□□ -1.38
ABCF1-206ENST00000479542 NDUFB1O75438 58 aa6.45□□□□□ -1.38
ABCF1-206ENST00000479542 A8MWP4 228 aa6.44□□□□□ -1.38
ABCF1-206ENST00000479542 H3BT86 120 aa6.43□□□□□ -1.38
ABCF1-206ENST00000479542 IGKV3D-7A0A0C4DH55 119 aa6.42□□□□□ -1.38
ABCF1-206ENST00000479542 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
ABCF1-206ENST00000479542 C8orf17Q9NRJ1 99 aa6.42□□□□□ -1.38
ABCF1-206ENST00000479542 SPINK7P58062 85 aa6.41□□□□□ -1.38
ABCF1-206ENST00000479542 NREPQ16612 68 aa6.41□□□□□ -1.38
ABCF1-206ENST00000479542 Q8N9P0 234 aaPredicted RBP6.41□□□□□ -1.38
ABCF1-206ENST00000479542 KRTAP6-3Q3LI67 103 aa6.39□□□□□ -1.39
ABCF1-206ENST00000479542 PRR15Q8IV56 129 aa6.38□□□□□ -1.39
ABCF1-206ENST00000479542 Q6ZVQ6 151 aa6.36□□□□□ -1.39
ABCF1-206ENST00000479542 SPCS1Q9Y6A9 102 aa6.36□□□□□ -1.39
ABCF1-206ENST00000479542 COL5A1-AS1Q5SY13 56 aa6.35□□□□□ -1.39
ABCF1-206ENST00000479542 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
ABCF1-206ENST00000479542 K7EQZ3 153 aa6.32□□□□□ -1.4
ABCF1-206ENST00000479542 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
ABCF1-206ENST00000479542 MRPL34Q9BQ48 92 aaKnown RBP6.31□□□□□ -1.4
ABCF1-206ENST00000479542 BPY2O14599 106 aa6.3□□□□□ -1.4
ABCF1-206ENST00000479542 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
ABCF1-206ENST00000479542 WFDC13Q8IUB5 93 aa6.29□□□□□ -1.4
ABCF1-206ENST00000479542 PRO0461Q9UI25 63 aa6.28□□□□□ -1.4
ABCF1-206ENST00000479542 K7EP34 96 aa6.26□□□□□ -1.41
ABCF1-206ENST00000479542 NDUFS5O43920 106 aa6.24□□□□□ -1.41
ABCF1-206ENST00000479542 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
ABCF1-206ENST00000479542 Q8N9L7 120 aa6.24□□□□□ -1.41
ABCF1-206ENST00000479542 PCP4P48539 62 aa6.23□□□□□ -1.41
ABCF1-206ENST00000479542 A0A1B0GV90 55 aa6.21□□□□□ -1.42
ABCF1-206ENST00000479542 Q5W150 140 aa6.2□□□□□ -1.42
ABCF1-206ENST00000479542 CASC2Q6XLA1 102 aa6.2□□□□□ -1.42
ABCF1-206ENST00000479542 UBL5Q9BZL1 73 aa6.19□□□□□ -1.42
ABCF1-206ENST00000479542 GTF2H5Q6ZYL4 71 aa6.18□□□□□ -1.42
ABCF1-206ENST00000479542 HCG22E2RYF7 251 aa6.17□□□□□ -1.42
ABCF1-206ENST00000479542 IGKV2D-30A0A075B6S6 120 aa6.16□□□□□ -1.42
ABCF1-206ENST00000479542 IGKV2-30P06310 120 aa6.16□□□□□ -1.42
ABCF1-206ENST00000479542 F8W1H4 67 aa6.14□□□□□ -1.43
ABCF1-206ENST00000479542 NEBP20929 6669 aa6.13□□□□□ -1.43
ABCF1-206ENST00000479542 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
ABCF1-206ENST00000479542 CXCL6P80162 114 aa6.12□□□□□ -1.43
ABCF1-206ENST00000479542 ETDBQ3ZM63 59 aa6.12□□□□□ -1.43
ABCF1-206ENST00000479542 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
ABCF1-206ENST00000479542 A6NN06 94 aa6.07□□□□□ -1.44
ABCF1-206ENST00000479542 C4orf26Q17RF5 130 aa6.05□□□□□ -1.44
ABCF1-206ENST00000479542 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
ABCF1-206ENST00000479542 MT1BP07438 61 aa6.03□□□□□ -1.44
ABCF1-206ENST00000479542 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
ABCF1-206ENST00000479542 KRTAP5-9P26371 169 aa6.01□□□□□ -1.45
ABCF1-206ENST00000479542 Q5VV11 94 aa6.01□□□□□ -1.45
ABCF1-206ENST00000479542 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
ABCF1-206ENST00000479542 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
ABCF1-206ENST00000479542 KRTAP20-1Q3LI63 56 aa5.99□□□□□ -1.45
ABCF1-206ENST00000479542 ACYP1P07311 99 aa5.98□□□□□ -1.45
ABCF1-206ENST00000479542 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
ABCF1-206ENST00000479542 FAM236AA0A1B0GUQ0 79 aa5.95□□□□□ -1.46
ABCF1-206ENST00000479542 FAM236BA0A1B0GV22 79 aa5.95□□□□□ -1.46
ABCF1-206ENST00000479542 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms