RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 Q5VV11 94 aa14.49□□□□□ -0.09
SYNGAP1-206ENST00000479510 A0A087X002 238 aa14.48□□□□□ -0.09
SYNGAP1-206ENST00000479510 KRTAP21-3Q3LHN1 58 aa14.48□□□□□ -0.09
SYNGAP1-206ENST00000479510 NOTCH2NLQ7Z3S9 236 aa14.48□□□□□ -0.09
SYNGAP1-206ENST00000479510 DNAH8Q96JB1 4490 aa14.48□□□□□ -0.09
SYNGAP1-206ENST00000479510 LOC101927531A0A1B0GV80 90 aa14.46□□□□□ -0.09
SYNGAP1-206ENST00000479510 C8orf87E5RJ46 101 aa14.45□□□□□ -0.1
SYNGAP1-206ENST00000479510 CIRBP-AS1Q8TBR5 109 aa14.43□□□□□ -0.1
SYNGAP1-206ENST00000479510 MEGF8Q7Z7M0 2845 aa14.43□□□□□ -0.1
SYNGAP1-206ENST00000479510 SPINK6Q6UWN8 80 aa14.41□□□□□ -0.1
SYNGAP1-206ENST00000479510 DNAH2Q9P225 4427 aa14.41□□□□□ -0.1
SYNGAP1-206ENST00000479510 KRTAP13-3Q3SY46 172 aa14.4□□□□□ -0.1
SYNGAP1-206ENST00000479510 PRR15LQ9BU68 103 aa14.39□□□□□ -0.11
SYNGAP1-206ENST00000479510 LY6G6CO95867 125 aa14.37□□□□□ -0.11
SYNGAP1-206ENST00000479510 Q75L30 129 aa14.37□□□□□ -0.11
SYNGAP1-206ENST00000479510 KMT2AQ03164 3969 aa14.34□□□□□ -0.11
SYNGAP1-206ENST00000479510 CHKB-CPT1BH3BT56 60 aa14.34□□□□□ -0.11
SYNGAP1-206ENST00000479510 HRES1P13985 223 aa14.32□□□□□ -0.12
SYNGAP1-206ENST00000479510 Q5W150 140 aa14.32□□□□□ -0.12
SYNGAP1-206ENST00000479510 LINC01558Q9Y6Z2 57 aa14.32□□□□□ -0.12
SYNGAP1-206ENST00000479510 FBN3Q75N90 2809 aa14.29□□□□□ -0.12
SYNGAP1-206ENST00000479510 KRTAP10-2P60368 255 aa14.29□□□□□ -0.12
SYNGAP1-206ENST00000479510 FRAS1Q86XX4 4008 aa14.28□□□□□ -0.12
SYNGAP1-206ENST00000479510 DNAH6Q9C0G6 4158 aa14.28□□□□□ -0.12
SYNGAP1-206ENST00000479510 Q6ZSA8 131 aa14.28□□□□□ -0.12
SYNGAP1-206ENST00000479510 LINC00313P59037 77 aa14.24□□□□□ -0.13
SYNGAP1-206ENST00000479510 FAM229AH3BQW9 127 aa14.22□□□□□ -0.13
SYNGAP1-206ENST00000479510 KRTAP13-2Q52LG2 175 aa14.21□□□□□ -0.14
SYNGAP1-206ENST00000479510 SPAG11AQ6PDA7 123 aa14.2□□□□□ -0.14
SYNGAP1-206ENST00000479510 TGP01266 2768 aa14.18□□□□□ -0.14
SYNGAP1-206ENST00000479510 ALMS1Q8TCU4 4167 aa14.16□□□□□ -0.14
SYNGAP1-206ENST00000479510 ACYP2P14621 99 aa14.16□□□□□ -0.14
SYNGAP1-206ENST00000479510 A6NED7 52 aa14.15□□□□□ -0.14
SYNGAP1-206ENST00000479510 KRTAP10-1P60331 282 aa14.14□□□□□ -0.15
SYNGAP1-206ENST00000479510 DNAH11Q96DT5 4516 aa14.11□□□□□ -0.15
SYNGAP1-206ENST00000479510 DMAC1Q96GE9 116 aa14.11□□□□□ -0.15
SYNGAP1-206ENST00000479510 PMAIP1Q13794 54 aa14.1□□□□□ -0.15
SYNGAP1-206ENST00000479510 ATP11AUNQ6ZP68 121 aa14.1□□□□□ -0.15
SYNGAP1-206ENST00000479510 LCA10Q71F78 164 aa14.09□□□□□ -0.15
SYNGAP1-206ENST00000479510 A8MU10 97 aa14.08□□□□□ -0.15
SYNGAP1-206ENST00000479510 CDC42SE1Q9NRR8 79 aa14.08□□□□□ -0.15
SYNGAP1-206ENST00000479510 DNAH5Q8TE73 4624 aa14.08□□□□□ -0.16
SYNGAP1-206ENST00000479510 KRTAP1-4P0C5Y4 121 aa14.08□□□□□ -0.16
SYNGAP1-206ENST00000479510 IGKV2-30P06310 120 aa14.07□□□□□ -0.16
SYNGAP1-206ENST00000479510 KRTAP16-1A8MUX0 517 aa14.06□□□□□ -0.16
SYNGAP1-206ENST00000479510 PRR26Q8N8Z3 221 aa14.01□□□□□ -0.17
SYNGAP1-206ENST00000479510 C4orf48Q5BLP8 95 aa13.96□□□□□ -0.17
SYNGAP1-206ENST00000479510 SPINK1P00995 79 aa13.94□□□□□ -0.18
SYNGAP1-206ENST00000479510 SPTSSBQ8NFR3 76 aa13.92□□□□□ -0.18
SYNGAP1-206ENST00000479510 PLA2G1BP04054 148 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-206ENST00000479510 RETNLBQ9BQ08 111 aa13.91□□□□□ -0.18
SYNGAP1-206ENST00000479510 SPINK7P58062 85 aa13.9□□□□□ -0.18
SYNGAP1-206ENST00000479510 TYMSOSQ8TAI1 123 aa13.9□□□□□ -0.18
SYNGAP1-206ENST00000479510 PKD1P98161 4303 aa13.89□□□□□ -0.19
SYNGAP1-206ENST00000479510 LRP1BQ9NZR2 4599 aa13.88□□□□□ -0.19
SYNGAP1-206ENST00000479510 RPS29P62273 56 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-206ENST00000479510 A6NN06 94 aa13.83□□□□□ -0.2
SYNGAP1-206ENST00000479510 FAT2Q9NYQ8 4349 aa13.82□□□□□ -0.2
SYNGAP1-206ENST00000479510 KTN1-AS1Q86SY8 53 aa13.8□□□□□ -0.2
SYNGAP1-206ENST00000479510 IGKV2D-30A0A075B6S6 120 aa13.78□□□□□ -0.2
SYNGAP1-206ENST00000479510 A0A1B0GU69 56 aa13.73□□□□□ -0.21
SYNGAP1-206ENST00000479510 LINC00304Q8N9R0 145 aa13.73□□□□□ -0.21
SYNGAP1-206ENST00000479510 VPS13BQ7Z7G8 4022 aa13.69□□□□□ -0.22
SYNGAP1-206ENST00000479510 SEC61GP60059 68 aa13.69□□□□□ -0.22
SYNGAP1-206ENST00000479510 C7orf65Q6ZTY9 151 aa13.68□□□□□ -0.22
SYNGAP1-206ENST00000479510 HYDINQ4G0P3 5121 aa13.61□□□□□ -0.23
SYNGAP1-206ENST00000479510 SPATA8Q6RVD6 105 aa13.59□□□□□ -0.23
SYNGAP1-206ENST00000479510 SACSQ9NZJ4 4579 aa13.54□□□□□ -0.24
SYNGAP1-206ENST00000479510 UQCR11O14957 56 aa13.53□□□□□ -0.24
SYNGAP1-206ENST00000479510 C20orf166-AS1Q96NR2 134 aa13.49□□□□□ -0.25
SYNGAP1-206ENST00000479510 A8MUU9 505 aa13.48□□□□□ -0.25
SYNGAP1-206ENST00000479510 MIR22HGQ0VDD5 57 aa13.46□□□□□ -0.25
SYNGAP1-206ENST00000479510 A0A1B0GVY2 172 aa13.41□□□□□ -0.26
SYNGAP1-206ENST00000479510 Q8N1X5 172 aa13.41□□□□□ -0.26
SYNGAP1-206ENST00000479510 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
SYNGAP1-206ENST00000479510 KRTAP10-4P60372 401 aaPredicted RBP13.4□□□□□ -0.26
SYNGAP1-206ENST00000479510 RBM12B-AS1Q9P1G2 102 aa13.38□□□□□ -0.27
SYNGAP1-206ENST00000479510 C9orf92A6NGG3 77 aa13.32□□□□□ -0.28
SYNGAP1-206ENST00000479510 PKHD1P08F94 4074 aa13.31□□□□□ -0.28
SYNGAP1-206ENST00000479510 PKHD1L1Q86WI1 4243 aa13.29□□□□□ -0.28
SYNGAP1-206ENST00000479510 DYNC1H1Q14204 4646 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-206ENST00000479510 APOBP04114 4563 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-206ENST00000479510 KRTAP3-1Q9BYR8 98 aa13.18□□□□□ -0.3
SYNGAP1-206ENST00000479510 KMT2CQ8NEZ4 4911 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-206ENST00000479510 RYR2Q92736 4967 aa13.17□□□□□ -0.3
SYNGAP1-206ENST00000479510 COX6B2Q6YFQ2 88 aa13.06□□□□□ -0.32
SYNGAP1-206ENST00000479510 FAT1Q14517 4588 aa13.05□□□□□ -0.32
SYNGAP1-206ENST00000479510 PRAC1Q96KF2 57 aa13.02□□□□□ -0.33
SYNGAP1-206ENST00000479510 A0A1B0GU33 70 aa12.99□□□□□ -0.33
SYNGAP1-206ENST00000479510 H0YAA0 97 aa12.99□□□□□ -0.33
SYNGAP1-206ENST00000479510 ADM2Q7Z4H4 148 aa12.98□□□□□ -0.33
SYNGAP1-206ENST00000479510 FLG2Q5D862 2391 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-206ENST00000479510 H1FX-AS1Q4G0G2 97 aa12.96□□□□□ -0.33
SYNGAP1-206ENST00000479510 KRTAP10-8P60410 259 aa12.94□□□□□ -0.34
SYNGAP1-206ENST00000479510 RYR3Q15413 4870 aa12.86□□□□□ -0.35
SYNGAP1-206ENST00000479510 RPL37P61927 97 aaKnown RBP12.82□□□□□ -0.36
SYNGAP1-206ENST00000479510 Q5VSD8 79 aa12.76□□□□□ -0.37
SYNGAP1-206ENST00000479510 LINC01554Q52M75 96 aa12.76□□□□□ -0.37
SYNGAP1-206ENST00000479510 FAT3Q8TDW7 4589 aa12.75□□□□□ -0.37
SYNGAP1-206ENST00000479510 CSAG1Q6PB30 78 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms