RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 COX7BP24311 80 aa4.02□□□□□ -1.77
VCP-205ENST00000479300 MRPL55Q7Z7F7 128 aaKnown RBP4.02□□□□□ -1.77
VCP-205ENST00000479300 NKAPP1Q8N9T2 125 aa4.02□□□□□ -1.77
VCP-205ENST00000479300 A0A1B0GW54 56 aa4.01□□□□□ -1.77
VCP-205ENST00000479300 PRR26Q8N8Z3 221 aa4.01□□□□□ -1.77
VCP-205ENST00000479300 NDUFS5O43920 106 aa4□□□□□ -1.77
VCP-205ENST00000479300 ZNF861PO60384 105 aa4□□□□□ -1.77
VCP-205ENST00000479300 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
VCP-205ENST00000479300 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
VCP-205ENST00000479300 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
VCP-205ENST00000479300 UBE2AP49459 152 aa3.99□□□□□ -1.77
VCP-205ENST00000479300 Q6ZQY7 126 aa3.99□□□□□ -1.77
VCP-205ENST00000479300 KRTAP11-1Q8IUC1 163 aa3.99□□□□□ -1.77
VCP-205ENST00000479300 C1orf64Q8NEQ6 169 aa3.99□□□□□ -1.77
VCP-205ENST00000479300 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
VCP-205ENST00000479300 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
VCP-205ENST00000479300 RPL37AP8A6NKH3 93 aa3.98□□□□□ -1.77
VCP-205ENST00000479300 KRTAP7-1Q8IUC3 87 aa3.98□□□□□ -1.77
VCP-205ENST00000479300 HIGD2AQ9BW72 106 aa3.98□□□□□ -1.77
VCP-205ENST00000479300 NDUFB1O75438 58 aa3.97□□□□□ -1.77
VCP-205ENST00000479300 ELOF1P60002 83 aaKnown RBP3.97□□□□□ -1.77
VCP-205ENST00000479300 PRR4Q16378 134 aa3.97□□□□□ -1.77
VCP-205ENST00000479300 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
VCP-205ENST00000479300 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
VCP-205ENST00000479300 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
VCP-205ENST00000479300 ATP11AUNQ6ZP68 121 aa3.95□□□□□ -1.78
VCP-205ENST00000479300 LIMD2Q9BT23 127 aa3.95□□□□□ -1.78
VCP-205ENST00000479300 RBM12B-AS1Q9P1G2 102 aa3.95□□□□□ -1.78
VCP-205ENST00000479300 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
VCP-205ENST00000479300 PSPHP1O15172 72 aa3.94□□□□□ -1.78
VCP-205ENST00000479300 VPREB1P12018 145 aa3.94□□□□□ -1.78
VCP-205ENST00000479300 Q5VV11 94 aa3.94□□□□□ -1.78
VCP-205ENST00000479300 A8MUN3 132 aa3.93□□□□□ -1.78
VCP-205ENST00000479300 M0R378 163 aa3.93□□□□□ -1.78
VCP-205ENST00000479300 SMIM29Q86T20 159 aa3.93□□□□□ -1.78
VCP-205ENST00000479300 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
VCP-205ENST00000479300 Q8NDZ9 215 aa3.93□□□□□ -1.78
VCP-205ENST00000479300 Q9BRP9 147 aa3.93□□□□□ -1.78
VCP-205ENST00000479300 MUC17Q685J3 4493 aa3.92□□□□□ -1.78
VCP-205ENST00000479300 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
VCP-205ENST00000479300 ZNF73O43830 326 aaPredicted RBP3.92□□□□□ -1.78
VCP-205ENST00000479300 Q8N9L7 120 aa3.92□□□□□ -1.78
VCP-205ENST00000479300 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
VCP-205ENST00000479300 A6NN06 94 aa3.91□□□□□ -1.78
VCP-205ENST00000479300 H3BPC8 53 aa3.91□□□□□ -1.78
VCP-205ENST00000479300 PRLHP81277 87 aa3.91□□□□□ -1.78
VCP-205ENST00000479300 Q75L30 129 aa3.91□□□□□ -1.78
VCP-205ENST00000479300 ZNF706Q9Y5V0 76 aaPredicted RBP3.91□□□□□ -1.78
VCP-205ENST00000479300 IGLV5-48A0A075B6I7 105 aa3.9□□□□□ -1.79
VCP-205ENST00000479300 LOC101927531A0A1B0GV80 90 aa3.9□□□□□ -1.79
VCP-205ENST00000479300 C7orf65Q6ZTY9 151 aa3.9□□□□□ -1.79
VCP-205ENST00000479300 LINC00304Q8N9R0 145 aa3.9□□□□□ -1.79
VCP-205ENST00000479300 KCNQ1DNQ9H478 68 aa3.9□□□□□ -1.79
VCP-205ENST00000479300 A0A087X002 238 aa3.89□□□□□ -1.79
VCP-205ENST00000479300 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
VCP-205ENST00000479300 Q8N9P0 234 aaPredicted RBP3.89□□□□□ -1.79
VCP-205ENST00000479300 ANAPC11Q9NYG5 84 aa3.89□□□□□ -1.79
VCP-205ENST00000479300 HCG22E2RYF7 251 aa3.88□□□□□ -1.79
VCP-205ENST00000479300 MP68P56378 58 aa3.88□□□□□ -1.79
VCP-205ENST00000479300 KRTAP13-1Q8IUC0 172 aa3.88□□□□□ -1.79
VCP-205ENST00000479300 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
VCP-205ENST00000479300 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
VCP-205ENST00000479300 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
VCP-205ENST00000479300 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
VCP-205ENST00000479300 SPAG11AQ6PDA7 123 aa3.87□□□□□ -1.79
VCP-205ENST00000479300 LCA10Q71F78 164 aa3.87□□□□□ -1.79
VCP-205ENST00000479300 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
VCP-205ENST00000479300 KRTAP13-2Q52LG2 175 aa3.86□□□□□ -1.79
VCP-205ENST00000479300 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
VCP-205ENST00000479300 Q8NBF4 154 aa3.86□□□□□ -1.79
VCP-205ENST00000479300 SPRR4Q96PI1 79 aa3.86□□□□□ -1.79
VCP-205ENST00000479300 DSCR10P59022 87 aa3.85□□□□□ -1.79
VCP-205ENST00000479300 ST20-AS1Q8NBB2 130 aa3.85□□□□□ -1.79
VCP-205ENST00000479300 IGLV7-46A0A075B6I9 117 aa3.84□□□□□ -1.79
VCP-205ENST00000479300 A0A1W2PNM2 257 aa3.84□□□□□ -1.79
VCP-205ENST00000479300 A6NED7 52 aa3.84□□□□□ -1.79
VCP-205ENST00000479300 A8MU10 97 aa3.84□□□□□ -1.79
VCP-205ENST00000479300 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.79
VCP-205ENST00000479300 RETNLBQ9BQ08 111 aa3.84□□□□□ -1.79
VCP-205ENST00000479300 DHRS4-AS1Q9P1J3 65 aa3.84□□□□□ -1.79
VCP-205ENST00000479300 Q8N377 158 aa3.83□□□□□ -1.8
VCP-205ENST00000479300 C8orf87E5RJ46 101 aa3.82□□□□□ -1.8
VCP-205ENST00000479300 K7EQZ3 153 aa3.82□□□□□ -1.8
VCP-205ENST00000479300 SPRR1AP35321 89 aa3.82□□□□□ -1.8
VCP-205ENST00000479300 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
VCP-205ENST00000479300 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
VCP-205ENST00000479300 KRTAP4-1Q9BYQ7 146 aa3.82□□□□□ -1.8
VCP-205ENST00000479300 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
VCP-205ENST00000479300 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
VCP-205ENST00000479300 IGLV9-49A0A0B4J1Y8 123 aa3.81□□□□□ -1.8
VCP-205ENST00000479300 SPINK1P00995 79 aa3.81□□□□□ -1.8
VCP-205ENST00000479300 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
VCP-205ENST00000479300 H0Y9P7 68 aa3.8□□□□□ -1.8
VCP-205ENST00000479300 MOBPQ13875 183 aa3.8□□□□□ -1.8
VCP-205ENST00000479300 SSBP3-AS1Q7Z2R9 100 aa3.8□□□□□ -1.8
VCP-205ENST00000479300 COA5Q86WW8 74 aa3.8□□□□□ -1.8
VCP-205ENST00000479300 Q6ZRX8 168 aa3.79□□□□□ -1.8
VCP-205ENST00000479300 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
VCP-205ENST00000479300 KRTAP4-16G5E9R7 235 aaPredicted RBP3.78□□□□□ -1.8
VCP-205ENST00000479300 LINC00483Q53H64 154 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms