RNA–Protein interactions for RNA: ENST00000479187.5

LRRK2-206, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 8,306 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-206ENST00000479187 GCN1Q92616 2671 aaKnown RBP2.22□□□□□ -2.05
LRRK2-206ENST00000479187 CHD7Q9P2D1 2997 aa2.21□□□□□ -2.06
LRRK2-206ENST00000479187 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.06
LRRK2-206ENST00000479187 TEX15Q9BXT5 2789 aa2.2□□□□□ -2.06
LRRK2-206ENST00000479187 SPENQ96T58 3664 aaKnown RBP2.2□□□□□ -2.06
LRRK2-206ENST00000479187 ZFHX3Q15911 3703 aa2.19□□□□□ -2.06
LRRK2-206ENST00000479187 KRTAP4-5Q9BYR2 181 aa2.17□□□□□ -2.06
LRRK2-206ENST00000479187 LOC400499M0QZD8 3231 aa2.17□□□□□ -2.06
LRRK2-206ENST00000479187 KRTAP16-1A8MUX0 517 aa2.17□□□□□ -2.06
LRRK2-206ENST00000479187 PRAC1Q96KF2 57 aa2.17□□□□□ -2.06
LRRK2-206ENST00000479187 KRTAP8-1Q8IUC2 63 aa2.16□□□□□ -2.06
LRRK2-206ENST00000479187 KRTAP15-1Q3LI76 137 aa2.16□□□□□ -2.06
LRRK2-206ENST00000479187 DCHS1Q96JQ0 3298 aa2.16□□□□□ -2.06
LRRK2-206ENST00000479187 FREM2Q5SZK8 3169 aa2.16□□□□□ -2.06
LRRK2-206ENST00000479187 BPTFQ12830 3046 aa2.16□□□□□ -2.06
LRRK2-206ENST00000479187 STAB2Q8WWQ8 2551 aa2.15□□□□□ -2.06
LRRK2-206ENST00000479187 CFAP47Q6ZTR5 3102 aa2.15□□□□□ -2.06
LRRK2-206ENST00000479187 CELSR3Q9NYQ7 3312 aa2.15□□□□□ -2.06
LRRK2-206ENST00000479187 BSNQ9UPA5 3926 aa2.15□□□□□ -2.07
LRRK2-206ENST00000479187 CHD9Q3L8U1 2897 aa2.14□□□□□ -2.07
LRRK2-206ENST00000479187 IGSF10Q6WRI0 2623 aa2.14□□□□□ -2.07
LRRK2-206ENST00000479187 UBR5O95071 2799 aaPredicted RBP2.14□□□□□ -2.07
LRRK2-206ENST00000479187 DMXL1Q9Y485 3027 aa2.13□□□□□ -2.07
LRRK2-206ENST00000479187 TENM4Q6N022 2769 aa2.13□□□□□ -2.07
LRRK2-206ENST00000479187 ITPR2Q14571 2701 aa2.13□□□□□ -2.07
LRRK2-206ENST00000479187 MT1HL1P0DM35 61 aa2.13□□□□□ -2.07
LRRK2-206ENST00000479187 VPS13CQ709C8 3753 aa2.12□□□□□ -2.07
LRRK2-206ENST00000479187 SMG1Q96Q15 3661 aaKnown RBP2.12□□□□□ -2.07
LRRK2-206ENST00000479187 NBEAL1Q6ZS30 2694 aa2.11□□□□□ -2.07
LRRK2-206ENST00000479187 NSD1Q96L73 2696 aaPredicted RBP2.11□□□□□ -2.07
LRRK2-206ENST00000479187 KRTAP12-2P59991 146 aa2.1□□□□□ -2.07
LRRK2-206ENST00000479187 MAP1AP78559 2803 aaPredicted RBP2.1□□□□□ -2.07
LRRK2-206ENST00000479187 KRTAP10-6P60371 365 aaPredicted RBP2.1□□□□□ -2.07
LRRK2-206ENST00000479187 RELNP78509 3460 aa2.09□□□□□ -2.08
LRRK2-206ENST00000479187 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
LRRK2-206ENST00000479187 ZNF292O60281 2723 aa2.08□□□□□ -2.08
LRRK2-206ENST00000479187 UTP20O75691 2785 aaKnown RBP2.08□□□□□ -2.08
LRRK2-206ENST00000479187 FRYQ5TBA9 3013 aa2.08□□□□□ -2.08
LRRK2-206ENST00000479187 BOD1L1Q8NFC6 3051 aa2.08□□□□□ -2.08
LRRK2-206ENST00000479187 PRRC2CQ9Y520 2896 aaKnown RBP2.06□□□□□ -2.08
LRRK2-206ENST00000479187 NBPF19A0A087WUL8 3843 aa2.06□□□□□ -2.08
LRRK2-206ENST00000479187 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
LRRK2-206ENST00000479187 CSMD2Q7Z408 3487 aa2.06□□□□□ -2.08
LRRK2-206ENST00000479187 NBEAQ8NFP9 2946 aa2.05□□□□□ -2.08
LRRK2-206ENST00000479187 ATMQ13315 3056 aa2.05□□□□□ -2.08
LRRK2-206ENST00000479187 MGAQ8IWI9 3026 aa2.05□□□□□ -2.08
LRRK2-206ENST00000479187 HIVEP1P15822 2718 aa2.05□□□□□ -2.08
LRRK2-206ENST00000479187 TENM2Q9NT68 2774 aa2.05□□□□□ -2.08
LRRK2-206ENST00000479187 SPRR2EP22531 72 aa2.04□□□□□ -2.08
LRRK2-206ENST00000479187 SPRR2BP35325 72 aa2.04□□□□□ -2.08
LRRK2-206ENST00000479187 SPRR2AP35326 72 aa2.04□□□□□ -2.08
LRRK2-206ENST00000479187 SPRR2FQ96RM1 72 aa2.04□□□□□ -2.08
LRRK2-206ENST00000479187 KRTAP10-7P60409 375 aaPredicted RBP2.03□□□□□ -2.08
LRRK2-206ENST00000479187 CRYBG3Q68DQ2 2970 aa2.03□□□□□ -2.08
LRRK2-206ENST00000479187 COL12A1Q99715 3063 aa2.03□□□□□ -2.08
LRRK2-206ENST00000479187 DMXL2Q8TDJ6 3036 aa2.03□□□□□ -2.08
LRRK2-206ENST00000479187 CSMD1Q96PZ7 3565 aa2.02□□□□□ -2.09
LRRK2-206ENST00000479187 CENPEQ02224 2701 aa2.02□□□□□ -2.09
LRRK2-206ENST00000479187 AKAP13Q12802 2813 aa2□□□□□ -2.09
LRRK2-206ENST00000479187 CYSTM1Q9H1C7 97 aa2□□□□□ -2.09
LRRK2-206ENST00000479187 KALRNO60229 2985 aa1.99□□□□□ -2.09
LRRK2-206ENST00000479187 CHD6Q8TD26 2715 aa1.99□□□□□ -2.09
LRRK2-206ENST00000479187 SPRR2DP22532 72 aa1.99□□□□□ -2.09
LRRK2-206ENST00000479187 KRTAP10-4P60372 401 aaPredicted RBP1.99□□□□□ -2.09
LRRK2-206ENST00000479187 ZZEF1O43149 2961 aa1.99□□□□□ -2.09
LRRK2-206ENST00000479187 DSPP15924 2871 aaKnown RBP1.98□□□□□ -2.09
LRRK2-206ENST00000479187 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
LRRK2-206ENST00000479187 SVEP1Q4LDE5 3571 aa1.98□□□□□ -2.09
LRRK2-206ENST00000479187 ALMS1Q8TCU4 4167 aa1.98□□□□□ -2.09
LRRK2-206ENST00000479187 ZNF469Q96JG9 3925 aaPredicted RBP1.97□□□□□ -2.09
LRRK2-206ENST00000479187 FLNCQ14315 2725 aa1.96□□□□□ -2.1
LRRK2-206ENST00000479187 AKAP9Q99996 3911 aa1.95□□□□□ -2.1
LRRK2-206ENST00000479187 MT1HP80294 61 aa1.95□□□□□ -2.1
LRRK2-206ENST00000479187 HUWE1Q7Z6Z7 4374 aaKnown RBP1.94□□□□□ -2.1
LRRK2-206ENST00000479187 ADGRG4Q8IZF6 3080 aa1.94□□□□□ -2.1
LRRK2-206ENST00000479187 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
LRRK2-206ENST00000479187 ASH1LQ9NR48 2969 aaKnown RBP1.93□□□□□ -2.1
LRRK2-206ENST00000479187 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
LRRK2-206ENST00000479187 FBN3Q75N90 2809 aa1.92□□□□□ -2.1
LRRK2-206ENST00000479187 KRTAP9-6A0A140TA67 174 aa1.92□□□□□ -2.1
LRRK2-206ENST00000479187 CELSR1Q9NYQ6 3014 aa1.92□□□□□ -2.1
LRRK2-206ENST00000479187 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
LRRK2-206ENST00000479187 DCHS2Q6V1P9 2916 aa1.92□□□□□ -2.1
LRRK2-206ENST00000479187 CELSR2Q9HCU4 2923 aa1.92□□□□□ -2.1
LRRK2-206ENST00000479187 CUBNO60494 3623 aa1.92□□□□□ -2.1
LRRK2-206ENST00000479187 LRBAP50851 2863 aa1.91□□□□□ -2.1
LRRK2-206ENST00000479187 TACC2O95359 2948 aa1.91□□□□□ -2.1
LRRK2-206ENST00000479187 LCE2BO14633 110 aa1.9□□□□□ -2.1
LRRK2-206ENST00000479187 KRTAP10-5P60370 271 aa1.9□□□□□ -2.11
LRRK2-206ENST00000479187 H3BS24 57 aa1.89□□□□□ -2.11
LRRK2-206ENST00000479187 SRRM2Q9UQ35 2752 aaKnown RBP1.89□□□□□ -2.11
LRRK2-206ENST00000479187 APCP25054 2843 aa1.89□□□□□ -2.11
LRRK2-206ENST00000479187 KRTAP9-2Q9BYQ4 174 aa1.87□□□□□ -2.11
LRRK2-206ENST00000479187 TENM1Q9UKZ4 2725 aa1.87□□□□□ -2.11
LRRK2-206ENST00000479187 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
LRRK2-206ENST00000479187 ITPR1Q14643 2758 aa1.86□□□□□ -2.11
LRRK2-206ENST00000479187 CSMD3Q7Z407 3707 aa1.86□□□□□ -2.11
LRRK2-206ENST00000479187 LCE3AQ5TA76 89 aa1.85□□□□□ -2.11
LRRK2-206ENST00000479187 ANK2Q01484 3957 aa1.85□□□□□ -2.11
LRRK2-206ENST00000479187 MT2AP02795 61 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms