RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
TRAF3IP3-213ENST00000478359 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
TRAF3IP3-213ENST00000478359 C8orf87E5RJ46 101 aa7.28□□□□□ -1.24
TRAF3IP3-213ENST00000478359 H0Y9P7 68 aa7.28□□□□□ -1.24
TRAF3IP3-213ENST00000478359 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
TRAF3IP3-213ENST00000478359 PLA2G1BP04054 148 aaKnown RBP7.26□□□□□ -1.25
TRAF3IP3-213ENST00000478359 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
TRAF3IP3-213ENST00000478359 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
TRAF3IP3-213ENST00000478359 SPINK1P00995 79 aa7.24□□□□□ -1.25
TRAF3IP3-213ENST00000478359 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
TRAF3IP3-213ENST00000478359 LRP1BQ9NZR2 4599 aa7.23□□□□□ -1.25
TRAF3IP3-213ENST00000478359 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.25
TRAF3IP3-213ENST00000478359 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.25
TRAF3IP3-213ENST00000478359 NDUFS5O43920 106 aa7.21□□□□□ -1.26
TRAF3IP3-213ENST00000478359 SPAG11AQ6PDA7 123 aa7.2□□□□□ -1.26
TRAF3IP3-213ENST00000478359 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
TRAF3IP3-213ENST00000478359 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
TRAF3IP3-213ENST00000478359 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
TRAF3IP3-213ENST00000478359 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
TRAF3IP3-213ENST00000478359 LINC00313P59037 77 aa7.18□□□□□ -1.26
TRAF3IP3-213ENST00000478359 OXTP01178 125 aa7.17□□□□□ -1.26
TRAF3IP3-213ENST00000478359 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
TRAF3IP3-213ENST00000478359 VPS13BQ7Z7G8 4022 aa7.16□□□□□ -1.26
TRAF3IP3-213ENST00000478359 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
TRAF3IP3-213ENST00000478359 RYR2Q92736 4967 aa7.15□□□□□ -1.26
TRAF3IP3-213ENST00000478359 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
TRAF3IP3-213ENST00000478359 LINC00304Q8N9R0 145 aa7.14□□□□□ -1.27
TRAF3IP3-213ENST00000478359 PKHD1P08F94 4074 aa7.12□□□□□ -1.27
TRAF3IP3-213ENST00000478359 LOC101927531A0A1B0GV80 90 aa7.12□□□□□ -1.27
TRAF3IP3-213ENST00000478359 Q8N9P0 234 aaPredicted RBP7.12□□□□□ -1.27
TRAF3IP3-213ENST00000478359 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
TRAF3IP3-213ENST00000478359 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
TRAF3IP3-213ENST00000478359 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
TRAF3IP3-213ENST00000478359 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.28
TRAF3IP3-213ENST00000478359 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
TRAF3IP3-213ENST00000478359 KRTAP13-3Q3SY46 172 aa7.07□□□□□ -1.28
TRAF3IP3-213ENST00000478359 RYR3Q15413 4870 aa7.06□□□□□ -1.28
TRAF3IP3-213ENST00000478359 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
TRAF3IP3-213ENST00000478359 PRR4Q16378 134 aa7.04□□□□□ -1.28
TRAF3IP3-213ENST00000478359 PCOTHQ58A44 107 aa7.03□□□□□ -1.28
TRAF3IP3-213ENST00000478359 Q5W150 140 aa7.03□□□□□ -1.28
TRAF3IP3-213ENST00000478359 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
TRAF3IP3-213ENST00000478359 APOBP04114 4563 aaKnown RBP7.02□□□□□ -1.29
TRAF3IP3-213ENST00000478359 V9GYY9 64 aa6.98□□□□□ -1.29
TRAF3IP3-213ENST00000478359 C4orf26Q17RF5 130 aa6.98□□□□□ -1.29
TRAF3IP3-213ENST00000478359 Q1T7F1 81 aa6.96□□□□□ -1.29
TRAF3IP3-213ENST00000478359 IGKV2-30P06310 120 aa6.96□□□□□ -1.3
TRAF3IP3-213ENST00000478359 Q5VSD8 79 aa6.94□□□□□ -1.3
TRAF3IP3-213ENST00000478359 COA5Q86WW8 74 aa6.94□□□□□ -1.3
TRAF3IP3-213ENST00000478359 MPLKIPQ8TAP9 179 aa6.94□□□□□ -1.3
TRAF3IP3-213ENST00000478359 FAT1Q14517 4588 aa6.9□□□□□ -1.3
TRAF3IP3-213ENST00000478359 ACYP2P14621 99 aa6.9□□□□□ -1.31
TRAF3IP3-213ENST00000478359 HRES1P13985 223 aa6.89□□□□□ -1.31
TRAF3IP3-213ENST00000478359 PKHD1L1Q86WI1 4243 aa6.88□□□□□ -1.31
TRAF3IP3-213ENST00000478359 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
TRAF3IP3-213ENST00000478359 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
TRAF3IP3-213ENST00000478359 KRTAP10-8P60410 259 aa6.87□□□□□ -1.31
TRAF3IP3-213ENST00000478359 A8MUU9 505 aa6.87□□□□□ -1.31
TRAF3IP3-213ENST00000478359 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
TRAF3IP3-213ENST00000478359 C7orf65Q6ZTY9 151 aa6.86□□□□□ -1.31
TRAF3IP3-213ENST00000478359 IGKV2D-30A0A075B6S6 120 aa6.85□□□□□ -1.31
TRAF3IP3-213ENST00000478359 EPPK1P58107 5090 aaKnown RBP6.84□□□□□ -1.31
TRAF3IP3-213ENST00000478359 Q8N1X5 172 aa6.83□□□□□ -1.32
TRAF3IP3-213ENST00000478359 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
TRAF3IP3-213ENST00000478359 Q75L30 129 aa6.79□□□□□ -1.32
TRAF3IP3-213ENST00000478359 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
TRAF3IP3-213ENST00000478359 A8MUN3 132 aa6.78□□□□□ -1.32
TRAF3IP3-213ENST00000478359 HSPG2P98160 4391 aa6.78□□□□□ -1.32
TRAF3IP3-213ENST00000478359 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
TRAF3IP3-213ENST00000478359 PSPHP1O15172 72 aa6.76□□□□□ -1.33
TRAF3IP3-213ENST00000478359 RYR1P21817 5038 aa6.76□□□□□ -1.33
TRAF3IP3-213ENST00000478359 FLG2Q5D862 2391 aaPredicted RBP6.75□□□□□ -1.33
TRAF3IP3-213ENST00000478359 SEC61GP60059 68 aa6.75□□□□□ -1.33
TRAF3IP3-213ENST00000478359 PRO0628Q9UI54 55 aa6.74□□□□□ -1.33
TRAF3IP3-213ENST00000478359 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
TRAF3IP3-213ENST00000478359 Q5VV11 94 aa6.72□□□□□ -1.33
TRAF3IP3-213ENST00000478359 BRK1Q8WUW1 75 aa6.71□□□□□ -1.34
TRAF3IP3-213ENST00000478359 TNXBP22105 4242 aa6.7□□□□□ -1.34
TRAF3IP3-213ENST00000478359 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
TRAF3IP3-213ENST00000478359 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
TRAF3IP3-213ENST00000478359 J3QL48 77 aa6.69□□□□□ -1.34
TRAF3IP3-213ENST00000478359 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
TRAF3IP3-213ENST00000478359 SPINK7P58062 85 aa6.68□□□□□ -1.34
TRAF3IP3-213ENST00000478359 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
TRAF3IP3-213ENST00000478359 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
TRAF3IP3-213ENST00000478359 FAT3Q8TDW7 4589 aa6.65□□□□□ -1.34
TRAF3IP3-213ENST00000478359 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.34
TRAF3IP3-213ENST00000478359 SPTSSBQ8NFR3 76 aa6.65□□□□□ -1.34
TRAF3IP3-213ENST00000478359 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
TRAF3IP3-213ENST00000478359 XP32Q5T750 250 aa6.62□□□□□ -1.35
TRAF3IP3-213ENST00000478359 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
TRAF3IP3-213ENST00000478359 A6NED7 52 aa6.6□□□□□ -1.35
TRAF3IP3-213ENST00000478359 A0A1B0GU69 56 aa6.59□□□□□ -1.35
TRAF3IP3-213ENST00000478359 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
TRAF3IP3-213ENST00000478359 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
TRAF3IP3-213ENST00000478359 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
TRAF3IP3-213ENST00000478359 DMBT1Q9UGM3 2413 aaPredicted RBP6.54□□□□□ -1.36
TRAF3IP3-213ENST00000478359 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
TRAF3IP3-213ENST00000478359 HERC2O95714 4834 aa6.51□□□□□ -1.37
TRAF3IP3-213ENST00000478359 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms