RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ACYP1P07311 99 aa10.83□□□□□ -0.68
ACTB-210ENST00000477812 A0A1B0GVX0 72 aa10.81□□□□□ -0.68
ACTB-210ENST00000477812 MUC17Q685J3 4493 aa10.8□□□□□ -0.68
ACTB-210ENST00000477812 A8MWP4 228 aa10.8□□□□□ -0.68
ACTB-210ENST00000477812 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
ACTB-210ENST00000477812 DSCR10P59022 87 aa10.79□□□□□ -0.68
ACTB-210ENST00000477812 IGKV3D-7A0A0C4DH55 119 aa10.78□□□□□ -0.68
ACTB-210ENST00000477812 IGHV6-1A0A0B4J1U7 121 aa10.77□□□□□ -0.69
ACTB-210ENST00000477812 UBL5Q9BZL1 73 aa10.77□□□□□ -0.69
ACTB-210ENST00000477812 KRTAP16-1A8MUX0 517 aa10.76□□□□□ -0.69
ACTB-210ENST00000477812 BPY2O14599 106 aa10.75□□□□□ -0.69
ACTB-210ENST00000477812 LINC00313P59037 77 aa10.75□□□□□ -0.69
ACTB-210ENST00000477812 PRR15Q8IV56 129 aa10.74□□□□□ -0.69
ACTB-210ENST00000477812 C8orf87E5RJ46 101 aa10.73□□□□□ -0.69
ACTB-210ENST00000477812 NDUFB1O75438 58 aa10.73□□□□□ -0.69
ACTB-210ENST00000477812 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
ACTB-210ENST00000477812 RNF213Q63HN8 5207 aa10.72□□□□□ -0.69
ACTB-210ENST00000477812 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
ACTB-210ENST00000477812 Q75L30 129 aa10.71□□□□□ -0.69
ACTB-210ENST00000477812 K7EQZ3 153 aa10.7□□□□□ -0.7
ACTB-210ENST00000477812 A8MUU9 505 aa10.69□□□□□ -0.7
ACTB-210ENST00000477812 SEC61BP60468 96 aaKnown RBP10.69□□□□□ -0.7
ACTB-210ENST00000477812 C8orf17Q9NRJ1 99 aa10.68□□□□□ -0.7
ACTB-210ENST00000477812 Q8N9L7 120 aa10.66□□□□□ -0.7
ACTB-210ENST00000477812 MMP24-AS1A0A0U1RRL7 71 aa10.64□□□□□ -0.71
ACTB-210ENST00000477812 CXCL6P80162 114 aa10.63□□□□□ -0.71
ACTB-210ENST00000477812 PCOTHQ58A44 107 aa10.63□□□□□ -0.71
ACTB-210ENST00000477812 MUC2Q02817 5179 aa10.61□□□□□ -0.71
ACTB-210ENST00000477812 LINC00643Q86TS7 51 aa10.6□□□□□ -0.71
ACTB-210ENST00000477812 KRTAP4-1Q9BYQ7 146 aa10.6□□□□□ -0.71
ACTB-210ENST00000477812 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
ACTB-210ENST00000477812 Q8N9P0 234 aaPredicted RBP10.57□□□□□ -0.72
ACTB-210ENST00000477812 TMEM254Q8TBM7 123 aa10.55□□□□□ -0.72
ACTB-210ENST00000477812 hDV103S1A0JD37 113 aa10.53□□□□□ -0.72
ACTB-210ENST00000477812 ATP11AUNQ6ZP68 121 aa10.53□□□□□ -0.72
ACTB-210ENST00000477812 MRPL34Q9BQ48 92 aaKnown RBP10.52□□□□□ -0.73
ACTB-210ENST00000477812 CASC2Q6XLA1 102 aa10.49□□□□□ -0.73
ACTB-210ENST00000477812 HCG22E2RYF7 251 aa10.48□□□□□ -0.73
ACTB-210ENST00000477812 WFDC13Q8IUB5 93 aa10.48□□□□□ -0.73
ACTB-210ENST00000477812 ZCCHC13Q8WW36 166 aaKnown RBP10.43□□□□□ -0.74
ACTB-210ENST00000477812 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
ACTB-210ENST00000477812 IMUPQ9GZP8 106 aa10.4□□□□□ -0.74
ACTB-210ENST00000477812 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
ACTB-210ENST00000477812 NDUFS5O43920 106 aa10.36□□□□□ -0.75
ACTB-210ENST00000477812 A0A087WVE0 104 aa10.33□□□□□ -0.76
ACTB-210ENST00000477812 KRTAP19-2Q3LHN2 52 aa10.31□□□□□ -0.76
ACTB-210ENST00000477812 FAT4Q6V0I7 4981 aa10.31□□□□□ -0.76
ACTB-210ENST00000477812 Q5W150 140 aa10.3□□□□□ -0.76
ACTB-210ENST00000477812 A0A0U1RQV1 116 aa10.24□□□□□ -0.77
ACTB-210ENST00000477812 SPINK7P58062 85 aa10.23□□□□□ -0.77
ACTB-210ENST00000477812 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
ACTB-210ENST00000477812 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
ACTB-210ENST00000477812 HRES1P13985 223 aa10.21□□□□□ -0.77
ACTB-210ENST00000477812 MPLKIPQ8TAP9 179 aa10.18□□□□□ -0.78
ACTB-210ENST00000477812 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
ACTB-210ENST00000477812 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
ACTB-210ENST00000477812 SCGB1A1P11684 91 aa10.14□□□□□ -0.79
ACTB-210ENST00000477812 C7orf65Q6ZTY9 151 aa10.11□□□□□ -0.79
ACTB-210ENST00000477812 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
ACTB-210ENST00000477812 IGKV2D-30A0A075B6S6 120 aa10.1□□□□□ -0.79
ACTB-210ENST00000477812 UQCRQO14949 82 aa10.1□□□□□ -0.79
ACTB-210ENST00000477812 IGKV2-30P06310 120 aa10.1□□□□□ -0.79
ACTB-210ENST00000477812 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
ACTB-210ENST00000477812 TRAV22A0A0B4J277 110 aa10.08□□□□□ -0.8
ACTB-210ENST00000477812 ATOX1O00244 68 aa10.08□□□□□ -0.8
ACTB-210ENST00000477812 COX6B2Q6YFQ2 88 aa10.06□□□□□ -0.8
ACTB-210ENST00000477812 SMIM20Q8N5G0 67 aa10.06□□□□□ -0.8
ACTB-210ENST00000477812 MT1HP80294 61 aa10.03□□□□□ -0.8
ACTB-210ENST00000477812 RBM12B-AS1Q9P1G2 102 aa10.03□□□□□ -0.8
ACTB-210ENST00000477812 FLGP20930 4061 aaPredicted RBP10.02□□□□□ -0.81
ACTB-210ENST00000477812 H0Y9P7 68 aa10□□□□□ -0.81
ACTB-210ENST00000477812 CYP4F30PQ9H0H9 118 aa9.97□□□□□ -0.81
ACTB-210ENST00000477812 TRAV7A0A075B6U4 112 aa9.96□□□□□ -0.82
ACTB-210ENST00000477812 LOC101927531A0A1B0GV80 90 aa9.96□□□□□ -0.82
ACTB-210ENST00000477812 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
ACTB-210ENST00000477812 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
ACTB-210ENST00000477812 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
ACTB-210ENST00000477812 C5orf47Q569G3 176 aa9.92□□□□□ -0.82
ACTB-210ENST00000477812 ANAPC13Q9BS18 74 aa9.92□□□□□ -0.82
ACTB-210ENST00000477812 C4orf26Q17RF5 130 aa9.9□□□□□ -0.82
ACTB-210ENST00000477812 C1orf64Q8NEQ6 169 aa9.9□□□□□ -0.82
ACTB-210ENST00000477812 MP68P56378 58 aa9.89□□□□□ -0.83
ACTB-210ENST00000477812 LINC00208Q96KT6 92 aa9.88□□□□□ -0.83
ACTB-210ENST00000477812 H3BPC8 53 aa9.84□□□□□ -0.83
ACTB-210ENST00000477812 COX7CP15954 63 aa9.83□□□□□ -0.84
ACTB-210ENST00000477812 KRTAP3-1Q9BYR8 98 aa9.83□□□□□ -0.84
ACTB-210ENST00000477812 H1FX-AS1Q4G0G2 97 aa9.8□□□□□ -0.84
ACTB-210ENST00000477812 KLKP1Q107X0 134 aa9.79□□□□□ -0.84
ACTB-210ENST00000477812 M0R2T5 61 aa9.77□□□□□ -0.85
ACTB-210ENST00000477812 KRTAP10-6P60371 365 aaPredicted RBP9.75□□□□□ -0.85
ACTB-210ENST00000477812 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
ACTB-210ENST00000477812 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
ACTB-210ENST00000477812 PCP4P48539 62 aa9.68□□□□□ -0.86
ACTB-210ENST00000477812 CCDC179H3BU77 68 aa9.65□□□□□ -0.86
ACTB-210ENST00000477812 SNURFQ9Y675 71 aa9.64□□□□□ -0.87
ACTB-210ENST00000477812 NDUFC1O43677 76 aa9.61□□□□□ -0.87
ACTB-210ENST00000477812 A8MUN3 132 aa9.59□□□□□ -0.87
ACTB-210ENST00000477812 KRTAP9-8Q9BYQ0 159 aa9.59□□□□□ -0.87
ACTB-210ENST00000477812 S4R3F8 94 aa9.58□□□□□ -0.88
ACTB-210ENST00000477812 LCA10Q71F78 164 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms