RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 LIMD2Q9BT23 127 aa5.22□□□□□ -1.57
PGK1-204ENST00000477335 LINC00472Q9H8W2 130 aa5.22□□□□□ -1.57
PGK1-204ENST00000477335 DEFB116Q30KQ4 102 aa5.21□□□□□ -1.58
PGK1-204ENST00000477335 A0A1B0GW54 56 aa5.2□□□□□ -1.58
PGK1-204ENST00000477335 Q6ZVQ6 151 aa5.2□□□□□ -1.58
PGK1-204ENST00000477335 FAM240AA0A1B0GVK7 77 aa5.19□□□□□ -1.58
PGK1-204ENST00000477335 SS18L2Q9UHA2 77 aa5.19□□□□□ -1.58
PGK1-204ENST00000477335 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
PGK1-204ENST00000477335 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
PGK1-204ENST00000477335 NREPQ16612 68 aa5.17□□□□□ -1.58
PGK1-204ENST00000477335 LPAP08519 4548 aa5.16□□□□□ -1.58
PGK1-204ENST00000477335 ACYP1P07311 99 aa5.16□□□□□ -1.58
PGK1-204ENST00000477335 DSCR10P59022 87 aa5.16□□□□□ -1.58
PGK1-204ENST00000477335 IGKV4-1P06312 121 aa5.15□□□□□ -1.59
PGK1-204ENST00000477335 PRR4Q16378 134 aa5.14□□□□□ -1.59
PGK1-204ENST00000477335 SIGMAR1Q99720 223 aa5.14□□□□□ -1.59
PGK1-204ENST00000477335 UBL5Q9BZL1 73 aa5.14□□□□□ -1.59
PGK1-204ENST00000477335 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
PGK1-204ENST00000477335 IGKV3D-7A0A0C4DH55 119 aa5.13□□□□□ -1.59
PGK1-204ENST00000477335 J3QR89 54 aa5.13□□□□□ -1.59
PGK1-204ENST00000477335 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
PGK1-204ENST00000477335 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
PGK1-204ENST00000477335 Q8N9L7 120 aa5.13□□□□□ -1.59
PGK1-204ENST00000477335 K7ERU9 68 aa5.12□□□□□ -1.59
PGK1-204ENST00000477335 K7EQZ3 153 aa5.11□□□□□ -1.59
PGK1-204ENST00000477335 BPY2O14599 106 aa5.11□□□□□ -1.59
PGK1-204ENST00000477335 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
PGK1-204ENST00000477335 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
PGK1-204ENST00000477335 A8MWP4 228 aa5.1□□□□□ -1.59
PGK1-204ENST00000477335 J3KT08 172 aa5.1□□□□□ -1.59
PGK1-204ENST00000477335 IGHV6-1A0A0B4J1U7 121 aa5.09□□□□□ -1.59
PGK1-204ENST00000477335 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
PGK1-204ENST00000477335 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
PGK1-204ENST00000477335 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
PGK1-204ENST00000477335 CXCL6P80162 114 aa5.08□□□□□ -1.6
PGK1-204ENST00000477335 PRR15Q8IV56 129 aa5.08□□□□□ -1.6
PGK1-204ENST00000477335 KRTAP16-1A8MUX0 517 aa5.07□□□□□ -1.6
PGK1-204ENST00000477335 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
PGK1-204ENST00000477335 LRP2P98164 4655 aa5.07□□□□□ -1.6
PGK1-204ENST00000477335 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
PGK1-204ENST00000477335 MMP24-AS1A0A0U1RRL7 71 aa5.06□□□□□ -1.6
PGK1-204ENST00000477335 MT-ATP8P03928 68 aa5.06□□□□□ -1.6
PGK1-204ENST00000477335 TPRXLQ17RH7 258 aa5.06□□□□□ -1.6
PGK1-204ENST00000477335 C8orf17Q9NRJ1 99 aa5.06□□□□□ -1.6
PGK1-204ENST00000477335 ATP5EP2Q5VTU8 51 aa5.05□□□□□ -1.6
PGK1-204ENST00000477335 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
PGK1-204ENST00000477335 LINC00313P59037 77 aa5.04□□□□□ -1.6
PGK1-204ENST00000477335 A0A087WVE0 104 aa5.03□□□□□ -1.6
PGK1-204ENST00000477335 C8orf87E5RJ46 101 aa5.03□□□□□ -1.6
PGK1-204ENST00000477335 NDUFB1O75438 58 aa5.03□□□□□ -1.6
PGK1-204ENST00000477335 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
PGK1-204ENST00000477335 HIST1H4AP62805 103 aaKnown RBP5□□□□□ -1.61
PGK1-204ENST00000477335 WFDC13Q8IUB5 93 aa5□□□□□ -1.61
PGK1-204ENST00000477335 A8MUU9 505 aa4.99□□□□□ -1.61
PGK1-204ENST00000477335 HCG22E2RYF7 251 aa4.99□□□□□ -1.61
PGK1-204ENST00000477335 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
PGK1-204ENST00000477335 hDV103S1A0JD37 113 aa4.98□□□□□ -1.61
PGK1-204ENST00000477335 CASC2Q6XLA1 102 aa4.98□□□□□ -1.61
PGK1-204ENST00000477335 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
PGK1-204ENST00000477335 RPL37P61927 97 aaKnown RBP4.97□□□□□ -1.61
PGK1-204ENST00000477335 MRPL34Q9BQ48 92 aaKnown RBP4.97□□□□□ -1.61
PGK1-204ENST00000477335 Q75L30 129 aa4.96□□□□□ -1.62
PGK1-204ENST00000477335 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
PGK1-204ENST00000477335 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.62
PGK1-204ENST00000477335 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
PGK1-204ENST00000477335 IMUPQ9GZP8 106 aa4.94□□□□□ -1.62
PGK1-204ENST00000477335 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
PGK1-204ENST00000477335 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
PGK1-204ENST00000477335 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
PGK1-204ENST00000477335 Q5W150 140 aa4.91□□□□□ -1.62
PGK1-204ENST00000477335 FAM236AA0A1B0GUQ0 79 aa4.9□□□□□ -1.63
PGK1-204ENST00000477335 FAM236BA0A1B0GV22 79 aa4.9□□□□□ -1.63
PGK1-204ENST00000477335 NDUFS5O43920 106 aa4.9□□□□□ -1.63
PGK1-204ENST00000477335 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
PGK1-204ENST00000477335 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
PGK1-204ENST00000477335 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
PGK1-204ENST00000477335 OCR1Q9BZK8 76 aa4.87□□□□□ -1.63
PGK1-204ENST00000477335 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
PGK1-204ENST00000477335 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
PGK1-204ENST00000477335 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
PGK1-204ENST00000477335 MUC2Q02817 5179 aa4.83□□□□□ -1.64
PGK1-204ENST00000477335 UQCRQO14949 82 aa4.82□□□□□ -1.64
PGK1-204ENST00000477335 SCGB1A1P11684 91 aa4.82□□□□□ -1.64
PGK1-204ENST00000477335 TP53AIP1Q9HCN2 124 aa4.82□□□□□ -1.64
PGK1-204ENST00000477335 TRAV22A0A0B4J277 110 aa4.79□□□□□ -1.64
PGK1-204ENST00000477335 H0Y9P7 68 aa4.79□□□□□ -1.64
PGK1-204ENST00000477335 ATOX1O00244 68 aa4.79□□□□□ -1.64
PGK1-204ENST00000477335 SPINK7P58062 85 aa4.79□□□□□ -1.64
PGK1-204ENST00000477335 TRAV7A0A075B6U4 112 aa4.78□□□□□ -1.64
PGK1-204ENST00000477335 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
PGK1-204ENST00000477335 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
PGK1-204ENST00000477335 HRES1P13985 223 aa4.77□□□□□ -1.65
PGK1-204ENST00000477335 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
PGK1-204ENST00000477335 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
PGK1-204ENST00000477335 SMIM20Q8N5G0 67 aa4.74□□□□□ -1.65
PGK1-204ENST00000477335 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
PGK1-204ENST00000477335 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
PGK1-204ENST00000477335 LINC00208Q96KT6 92 aa4.74□□□□□ -1.65
PGK1-204ENST00000477335 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
PGK1-204ENST00000477335 C1orf64Q8NEQ6 169 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms