RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PKHD1L1Q86WI1 4243 aa0.93□□□□□ -2.26
XRN1-211ENST00000477237 FAT3Q8TDW7 4589 aa0.93□□□□□ -2.26
XRN1-211ENST00000477237 A0A0D9SG42 100 aa0.93□□□□□ -2.26
XRN1-211ENST00000477237 ZZEF1O43149 2961 aa0.93□□□□□ -2.26
XRN1-211ENST00000477237 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
XRN1-211ENST00000477237 ANK3Q12955 4377 aaKnown RBP0.92□□□□□ -2.26
XRN1-211ENST00000477237 CFAP47Q6ZTR5 3102 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 VPS13BQ7Z7G8 4022 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 HSPG2P98160 4391 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 DEFB108BQ8NET1 73 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 FRYQ5TBA9 3013 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 APOBP04114 4563 aaKnown RBP0.92□□□□□ -2.26
XRN1-211ENST00000477237 ZFHX4Q86UP3 3567 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 MEGF8Q7Z7M0 2845 aa0.92□□□□□ -2.26
XRN1-211ENST00000477237 SPTBN2O15020 2390 aa0.91□□□□□ -2.26
XRN1-211ENST00000477237 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
XRN1-211ENST00000477237 DNAH9Q9NYC9 4486 aa0.91□□□□□ -2.26
XRN1-211ENST00000477237 CMYA5Q8N3K9 4069 aa0.91□□□□□ -2.26
XRN1-211ENST00000477237 SPTBN5Q9NRC6 3674 aaKnown RBP0.91□□□□□ -2.26
XRN1-211ENST00000477237 ANK2Q01484 3957 aa0.9□□□□□ -2.26
XRN1-211ENST00000477237 KMT2AQ03164 3969 aa0.9□□□□□ -2.26
XRN1-211ENST00000477237 ABCA2Q9BZC7 2435 aa0.9□□□□□ -2.26
XRN1-211ENST00000477237 MKI67P46013 3256 aaKnown RBP0.9□□□□□ -2.26
XRN1-211ENST00000477237 AKAP13Q12802 2813 aa0.9□□□□□ -2.26
XRN1-211ENST00000477237 CENPFP49454 3210 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 HTN1P15515 57 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 ATMQ13315 3056 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 DNAH5Q8TE73 4624 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 DMDP11532 3685 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 PDZD2O15018 2839 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 NF1P21359 2839 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 DNAH17Q9UFH2 4485 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 CEP290O15078 2479 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 LRBAP50851 2863 aa0.9□□□□□ -2.27
XRN1-211ENST00000477237 FLGP20930 4061 aaPredicted RBP0.89□□□□□ -2.27
XRN1-211ENST00000477237 GVINP1Q7Z2Y8 2422 aa0.89□□□□□ -2.27
XRN1-211ENST00000477237 LYSTQ99698 3801 aa0.89□□□□□ -2.27
XRN1-211ENST00000477237 PKD1P98161 4303 aa0.89□□□□□ -2.27
XRN1-211ENST00000477237 DEFB136Q30KP8 78 aa0.89□□□□□ -2.27
XRN1-211ENST00000477237 MUC5BQ9HC84 5762 aaPredicted RBP0.89□□□□□ -2.27
XRN1-211ENST00000477237 SZT2Q5T011 3432 aa0.89□□□□□ -2.27
XRN1-211ENST00000477237 WDFY4Q6ZS81 3184 aa0.89□□□□□ -2.27
XRN1-211ENST00000477237 CELSR3Q9NYQ7 3312 aa0.89□□□□□ -2.27
XRN1-211ENST00000477237 COL12A1Q99715 3063 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 TRRAPQ9Y4A5 3859 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 MAP1AP78559 2803 aaPredicted RBP0.88□□□□□ -2.27
XRN1-211ENST00000477237 M0QZ58 72 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 SPEGQ15772 3267 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 COL6A5A8TX70 2615 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 CHD9Q3L8U1 2897 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 DMXL1Q9Y485 3027 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 DNAH6Q9C0G6 4158 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 CACNA1HO95180 2353 aa0.88□□□□□ -2.27
XRN1-211ENST00000477237 ZNF292O60281 2723 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 DNAH12Q6ZR08 3092 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 UTRNP46939 3433 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 EP300Q09472 2414 aaPredicted RBP0.87□□□□□ -2.27
XRN1-211ENST00000477237 DCHS2Q6V1P9 2916 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 SETD2Q9BYW2 2564 aaPredicted RBP0.87□□□□□ -2.27
XRN1-211ENST00000477237 CCDC168Q8NDH2 2452 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 DMXL2Q8TDJ6 3036 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 DCHS1Q96JQ0 3298 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 PLECQ15149 4684 aaKnown RBP0.87□□□□□ -2.27
XRN1-211ENST00000477237 CSMD3Q7Z407 3707 aa0.87□□□□□ -2.27
XRN1-211ENST00000477237 ITPR1Q14643 2758 aa0.86□□□□□ -2.27
XRN1-211ENST00000477237 HECTD4Q9Y4D8 3996 aa0.86□□□□□ -2.27
XRN1-211ENST00000477237 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
XRN1-211ENST00000477237 FREM2Q5SZK8 3169 aa0.86□□□□□ -2.27
XRN1-211ENST00000477237 CEP250Q9BV73 2442 aa0.86□□□□□ -2.27
XRN1-211ENST00000477237 ITPR3Q14573 2671 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 ABCA12Q86UK0 2595 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 MUC3AQ02505 3323 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 PKD1L2Q7Z442 2459 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 NAV2Q8IVL1 2488 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 RP1L1Q8IWN7 2480 aaPredicted RBP0.85□□□□□ -2.27
XRN1-211ENST00000477237 DEFB124Q8NES8 71 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 TTC28Q96AY4 2481 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 FAT2Q9NYQ8 4349 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 KALRNO60229 2985 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 SMG1Q96Q15 3661 aaKnown RBP0.85□□□□□ -2.27
XRN1-211ENST00000477237 SPENQ96T58 3664 aaKnown RBP0.85□□□□□ -2.27
XRN1-211ENST00000477237 NCOR1O75376 2440 aa0.85□□□□□ -2.27
XRN1-211ENST00000477237 APC2O95996 2303 aa0.84□□□□□ -2.28
XRN1-211ENST00000477237 COL7A1Q02388 2944 aa0.84□□□□□ -2.28
XRN1-211ENST00000477237 CREBBPQ92793 2442 aa0.84□□□□□ -2.28
XRN1-211ENST00000477237 PCNTO95613 3336 aa0.84□□□□□ -2.28
XRN1-211ENST00000477237 HECTD1Q9ULT8 2610 aa0.84□□□□□ -2.28
XRN1-211ENST00000477237 APCP25054 2843 aa0.83□□□□□ -2.28
XRN1-211ENST00000477237 NIPBLQ6KC79 2804 aaeCLIP0.83□□□□□ -2.28
XRN1-211ENST00000477237 MAP1BP46821 2468 aaKnown RBP0.83□□□□□ -2.28
XRN1-211ENST00000477237 A0A096LNI7 61 aa0.83□□□□□ -2.28
XRN1-211ENST00000477237 CD52P31358 61 aa0.83□□□□□ -2.28
XRN1-211ENST00000477237 EP400Q96L91 3159 aa0.83□□□□□ -2.28
XRN1-211ENST00000477237 DYNC1H1Q14204 4646 aaKnown RBP0.83□□□□□ -2.28
XRN1-211ENST00000477237 USP9YO00507 2555 aaPredicted RBP0.83□□□□□ -2.28
XRN1-211ENST00000477237 POLQO75417 2590 aa0.82□□□□□ -2.28
XRN1-211ENST00000477237 LAMA2P24043 3122 aaKnown RBP0.82□□□□□ -2.28
XRN1-211ENST00000477237 SPINK6Q6UWN8 80 aa0.82□□□□□ -2.28
XRN1-211ENST00000477237 LAMA5O15230 3695 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms