RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 HRCT1Q6UXD1 115 aa7.31□□□□□ -1.24
CDKAL1-203ENST00000476517 FAM236AA0A1B0GUQ0 79 aa7.3□□□□□ -1.24
CDKAL1-203ENST00000476517 FAM236BA0A1B0GV22 79 aa7.3□□□□□ -1.24
CDKAL1-203ENST00000476517 J3KT08 172 aa7.29□□□□□ -1.24
CDKAL1-203ENST00000476517 KRTAP10-4P60372 401 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-203ENST00000476517 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
CDKAL1-203ENST00000476517 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
CDKAL1-203ENST00000476517 A0A087WVE0 104 aa7.27□□□□□ -1.25
CDKAL1-203ENST00000476517 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
CDKAL1-203ENST00000476517 Q5VSD8 79 aa7.26□□□□□ -1.25
CDKAL1-203ENST00000476517 LIMD2Q9BT23 127 aa7.26□□□□□ -1.25
CDKAL1-203ENST00000476517 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
CDKAL1-203ENST00000476517 ATOX1O00244 68 aa7.25□□□□□ -1.25
CDKAL1-203ENST00000476517 PCP4P48539 62 aa7.25□□□□□ -1.25
CDKAL1-203ENST00000476517 DSCR10P59022 87 aa7.24□□□□□ -1.25
CDKAL1-203ENST00000476517 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
CDKAL1-203ENST00000476517 Q8N9L7 120 aa7.23□□□□□ -1.25
CDKAL1-203ENST00000476517 A8MWP4 228 aa7.22□□□□□ -1.25
CDKAL1-203ENST00000476517 NDUFB1O75438 58 aa7.22□□□□□ -1.25
CDKAL1-203ENST00000476517 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
CDKAL1-203ENST00000476517 ASB16-AS1Q495Z4 193 aa7.22□□□□□ -1.25
CDKAL1-203ENST00000476517 PRR26Q8N8Z3 221 aa7.22□□□□□ -1.25
CDKAL1-203ENST00000476517 K7EQZ3 153 aa7.21□□□□□ -1.26
CDKAL1-203ENST00000476517 Q5XG85 94 aa7.21□□□□□ -1.26
CDKAL1-203ENST00000476517 SPAG11AQ6PDA7 123 aa7.21□□□□□ -1.26
CDKAL1-203ENST00000476517 Q96NJ1 140 aa7.21□□□□□ -1.26
CDKAL1-203ENST00000476517 SPINK1P00995 79 aa7.2□□□□□ -1.26
CDKAL1-203ENST00000476517 LINC00304Q8N9R0 145 aa7.2□□□□□ -1.26
CDKAL1-203ENST00000476517 RPS29P62273 56 aaKnown RBP7.19□□□□□ -1.26
CDKAL1-203ENST00000476517 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
CDKAL1-203ENST00000476517 SMIM20Q8N5G0 67 aa7.18□□□□□ -1.26
CDKAL1-203ENST00000476517 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
CDKAL1-203ENST00000476517 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
CDKAL1-203ENST00000476517 PKHD1L1Q86WI1 4243 aa7.14□□□□□ -1.27
CDKAL1-203ENST00000476517 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
CDKAL1-203ENST00000476517 KRTAP4-11Q9BYQ6 195 aa7.14□□□□□ -1.27
CDKAL1-203ENST00000476517 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
CDKAL1-203ENST00000476517 TRAV7A0A075B6U4 112 aa7.11□□□□□ -1.27
CDKAL1-203ENST00000476517 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
CDKAL1-203ENST00000476517 WFDC13Q8IUB5 93 aa7.11□□□□□ -1.27
CDKAL1-203ENST00000476517 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
CDKAL1-203ENST00000476517 COX7CP15954 63 aa7.1□□□□□ -1.27
CDKAL1-203ENST00000476517 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
CDKAL1-203ENST00000476517 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
CDKAL1-203ENST00000476517 C8orf87E5RJ46 101 aa7.09□□□□□ -1.27
CDKAL1-203ENST00000476517 UQCRQO14949 82 aa7.09□□□□□ -1.27
CDKAL1-203ENST00000476517 LCE4AQ5TA78 99 aa7.09□□□□□ -1.27
CDKAL1-203ENST00000476517 C8orf17Q9NRJ1 99 aa7.09□□□□□ -1.27
CDKAL1-203ENST00000476517 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
CDKAL1-203ENST00000476517 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
CDKAL1-203ENST00000476517 TMEM254Q8TBM7 123 aa7.05□□□□□ -1.28
CDKAL1-203ENST00000476517 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
CDKAL1-203ENST00000476517 LRP1Q07954 4544 aaKnown RBP7.05□□□□□ -1.28
CDKAL1-203ENST00000476517 LRP2P98164 4655 aa7.04□□□□□ -1.28
CDKAL1-203ENST00000476517 CCDC179H3BU77 68 aa7.02□□□□□ -1.29
CDKAL1-203ENST00000476517 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
CDKAL1-203ENST00000476517 MRPL34Q9BQ48 92 aaKnown RBP7.02□□□□□ -1.29
CDKAL1-203ENST00000476517 LINC00313P59037 77 aa7.01□□□□□ -1.29
CDKAL1-203ENST00000476517 OXTP01178 125 aa6.99□□□□□ -1.29
CDKAL1-203ENST00000476517 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
CDKAL1-203ENST00000476517 NDUFS5O43920 106 aa6.98□□□□□ -1.29
CDKAL1-203ENST00000476517 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
CDKAL1-203ENST00000476517 KRTAP9-7A8MTY7 169 aa6.97□□□□□ -1.29
CDKAL1-203ENST00000476517 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
CDKAL1-203ENST00000476517 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
CDKAL1-203ENST00000476517 MP68P56378 58 aa6.96□□□□□ -1.3
CDKAL1-203ENST00000476517 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
CDKAL1-203ENST00000476517 KLKP1Q107X0 134 aa6.93□□□□□ -1.3
CDKAL1-203ENST00000476517 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-203ENST00000476517 TRAV22A0A0B4J277 110 aa6.92□□□□□ -1.3
CDKAL1-203ENST00000476517 H0Y9P7 68 aa6.92□□□□□ -1.3
CDKAL1-203ENST00000476517 H3BPC8 53 aa6.92□□□□□ -1.3
CDKAL1-203ENST00000476517 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
CDKAL1-203ENST00000476517 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
CDKAL1-203ENST00000476517 NDUFC1O43677 76 aa6.91□□□□□ -1.3
CDKAL1-203ENST00000476517 A0A0U1RQV1 116 aa6.9□□□□□ -1.3
CDKAL1-203ENST00000476517 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
CDKAL1-203ENST00000476517 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-203ENST00000476517 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
CDKAL1-203ENST00000476517 TNXBP22105 4242 aa6.88□□□□□ -1.31
CDKAL1-203ENST00000476517 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
CDKAL1-203ENST00000476517 LINC00208Q96KT6 92 aa6.85□□□□□ -1.31
CDKAL1-203ENST00000476517 C9orf92A6NGG3 77 aa6.84□□□□□ -1.31
CDKAL1-203ENST00000476517 TMEM258P61165 79 aa6.84□□□□□ -1.31
CDKAL1-203ENST00000476517 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
CDKAL1-203ENST00000476517 C1orf64Q8NEQ6 169 aa6.83□□□□□ -1.32
CDKAL1-203ENST00000476517 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
CDKAL1-203ENST00000476517 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
CDKAL1-203ENST00000476517 IGLV7-46A0A075B6I9 117 aa6.82□□□□□ -1.32
CDKAL1-203ENST00000476517 H7BZZ5 65 aa6.81□□□□□ -1.32
CDKAL1-203ENST00000476517 LOC101927531A0A1B0GV80 90 aa6.8□□□□□ -1.32
CDKAL1-203ENST00000476517 C20orf166-AS1Q96NR2 134 aa6.8□□□□□ -1.32
CDKAL1-203ENST00000476517 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
CDKAL1-203ENST00000476517 A8MUU9 505 aa6.78□□□□□ -1.32
CDKAL1-203ENST00000476517 KRTAP13-3Q3SY46 172 aa6.78□□□□□ -1.32
CDKAL1-203ENST00000476517 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
CDKAL1-203ENST00000476517 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
CDKAL1-203ENST00000476517 PRR4Q16378 134 aa6.77□□□□□ -1.33
CDKAL1-203ENST00000476517 Q5W150 140 aa6.77□□□□□ -1.33
CDKAL1-203ENST00000476517 KRTAP5-3Q6L8H2 238 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms