RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ATXN8Q156A1 80 aa5.91□□□□□ -1.46
NUDCD3-206ENST00000475952 C9JAW5 83 aa5.9□□□□□ -1.46
NUDCD3-206ENST00000475952 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
NUDCD3-206ENST00000475952 IGHV6-1A0A0B4J1U7 121 aa5.89□□□□□ -1.47
NUDCD3-206ENST00000475952 TRBV20-1A0A075B6N2 111 aa5.88□□□□□ -1.47
NUDCD3-206ENST00000475952 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
NUDCD3-206ENST00000475952 TSTD3H0UI37 97 aa5.88□□□□□ -1.47
NUDCD3-206ENST00000475952 LYRM7Q5U5X0 104 aa5.88□□□□□ -1.47
NUDCD3-206ENST00000475952 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
NUDCD3-206ENST00000475952 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
NUDCD3-206ENST00000475952 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
NUDCD3-206ENST00000475952 A0A1B0GVX0 72 aa5.86□□□□□ -1.47
NUDCD3-206ENST00000475952 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
NUDCD3-206ENST00000475952 J3KT08 172 aa5.85□□□□□ -1.47
NUDCD3-206ENST00000475952 LCE2BO14633 110 aa5.84□□□□□ -1.47
NUDCD3-206ENST00000475952 Q6ZQT0 140 aa5.84□□□□□ -1.47
NUDCD3-206ENST00000475952 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
NUDCD3-206ENST00000475952 A0A1B0GW54 56 aa5.83□□□□□ -1.48
NUDCD3-206ENST00000475952 PDE6GP18545 87 aa5.83□□□□□ -1.48
NUDCD3-206ENST00000475952 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
NUDCD3-206ENST00000475952 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
NUDCD3-206ENST00000475952 BATFQ16520 125 aa5.82□□□□□ -1.48
NUDCD3-206ENST00000475952 NDUFB1O75438 58 aa5.81□□□□□ -1.48
NUDCD3-206ENST00000475952 C14orf132Q9NPU4 83 aa5.8□□□□□ -1.48
NUDCD3-206ENST00000475952 FAM236DA0A1B0GTK5 79 aa5.79□□□□□ -1.48
NUDCD3-206ENST00000475952 FAM236CP0DP71 79 aa5.79□□□□□ -1.48
NUDCD3-206ENST00000475952 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
NUDCD3-206ENST00000475952 RBM12B-AS1Q9P1G2 102 aa5.78□□□□□ -1.48
NUDCD3-206ENST00000475952 A8MWP4 228 aa5.76□□□□□ -1.49
NUDCD3-206ENST00000475952 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
NUDCD3-206ENST00000475952 H3BT86 120 aa5.75□□□□□ -1.49
NUDCD3-206ENST00000475952 ZCCHC13Q8WW36 166 aaKnown RBP5.75□□□□□ -1.49
NUDCD3-206ENST00000475952 HRES1P13985 223 aa5.74□□□□□ -1.49
NUDCD3-206ENST00000475952 C8orf17Q9NRJ1 99 aa5.74□□□□□ -1.49
NUDCD3-206ENST00000475952 A0A1W2PPM0 123 aa5.73□□□□□ -1.49
NUDCD3-206ENST00000475952 NREPQ16612 68 aa5.73□□□□□ -1.49
NUDCD3-206ENST00000475952 Q8N9P0 234 aaPredicted RBP5.73□□□□□ -1.49
NUDCD3-206ENST00000475952 MPLKIPQ8TAP9 179 aa5.73□□□□□ -1.49
NUDCD3-206ENST00000475952 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
NUDCD3-206ENST00000475952 PCP4L1A6NKN8 68 aa5.72□□□□□ -1.49
NUDCD3-206ENST00000475952 TAX1BP3O14907 124 aa5.72□□□□□ -1.49
NUDCD3-206ENST00000475952 MTURNQ8N3F0 131 aa5.72□□□□□ -1.49
NUDCD3-206ENST00000475952 Q6ZVQ6 151 aa5.7□□□□□ -1.5
NUDCD3-206ENST00000475952 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
NUDCD3-206ENST00000475952 SPINK7P58062 85 aa5.68□□□□□ -1.5
NUDCD3-206ENST00000475952 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
NUDCD3-206ENST00000475952 TMEM254Q8TBM7 123 aa5.67□□□□□ -1.5
NUDCD3-206ENST00000475952 MMP24-AS1A0A0U1RRL7 71 aa5.66□□□□□ -1.5
NUDCD3-206ENST00000475952 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
NUDCD3-206ENST00000475952 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
NUDCD3-206ENST00000475952 SPCS1Q9Y6A9 102 aa5.66□□□□□ -1.5
NUDCD3-206ENST00000475952 K7EQZ3 153 aa5.65□□□□□ -1.5
NUDCD3-206ENST00000475952 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
NUDCD3-206ENST00000475952 hDV103S1A0JD37 113 aa5.63□□□□□ -1.51
NUDCD3-206ENST00000475952 BPY2O14599 106 aa5.63□□□□□ -1.51
NUDCD3-206ENST00000475952 NDUFS5O43920 106 aa5.62□□□□□ -1.51
NUDCD3-206ENST00000475952 COL5A1-AS1Q5SY13 56 aa5.61□□□□□ -1.51
NUDCD3-206ENST00000475952 MT2AP02795 61 aa5.59□□□□□ -1.51
NUDCD3-206ENST00000475952 H3BS24 57 aa5.57□□□□□ -1.52
NUDCD3-206ENST00000475952 K7EP34 96 aa5.56□□□□□ -1.52
NUDCD3-206ENST00000475952 CASC2Q6XLA1 102 aa5.55□□□□□ -1.52
NUDCD3-206ENST00000475952 Q8N9L7 120 aa5.55□□□□□ -1.52
NUDCD3-206ENST00000475952 UBL5Q9BZL1 73 aa5.55□□□□□ -1.52
NUDCD3-206ENST00000475952 MT1FP04733 61 aa5.54□□□□□ -1.52
NUDCD3-206ENST00000475952 C7orf65Q6ZTY9 151 aa5.54□□□□□ -1.52
NUDCD3-206ENST00000475952 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
NUDCD3-206ENST00000475952 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
NUDCD3-206ENST00000475952 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
NUDCD3-206ENST00000475952 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
NUDCD3-206ENST00000475952 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
NUDCD3-206ENST00000475952 HCG22E2RYF7 251 aa5.52□□□□□ -1.53
NUDCD3-206ENST00000475952 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
NUDCD3-206ENST00000475952 GTF2H5Q6ZYL4 71 aa5.51□□□□□ -1.53
NUDCD3-206ENST00000475952 CXCL6P80162 114 aa5.5□□□□□ -1.53
NUDCD3-206ENST00000475952 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
NUDCD3-206ENST00000475952 Q5W150 140 aa5.49□□□□□ -1.53
NUDCD3-206ENST00000475952 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
NUDCD3-206ENST00000475952 NEBP20929 6669 aa5.49□□□□□ -1.53
NUDCD3-206ENST00000475952 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
NUDCD3-206ENST00000475952 F8W1H4 67 aa5.46□□□□□ -1.54
NUDCD3-206ENST00000475952 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
NUDCD3-206ENST00000475952 ETDBQ3ZM63 59 aa5.43□□□□□ -1.54
NUDCD3-206ENST00000475952 A0A1B0GV90 55 aa5.42□□□□□ -1.54
NUDCD3-206ENST00000475952 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
NUDCD3-206ENST00000475952 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
NUDCD3-206ENST00000475952 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.55
NUDCD3-206ENST00000475952 ACYP1P07311 99 aa5.34□□□□□ -1.55
NUDCD3-206ENST00000475952 C1orf64Q8NEQ6 169 aa5.32□□□□□ -1.56
NUDCD3-206ENST00000475952 S4R3F8 94 aa5.32□□□□□ -1.56
NUDCD3-206ENST00000475952 FAM240AA0A1B0GVK7 77 aa5.31□□□□□ -1.56
NUDCD3-206ENST00000475952 ATP5EP2Q5VTU8 51 aa5.31□□□□□ -1.56
NUDCD3-206ENST00000475952 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
NUDCD3-206ENST00000475952 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
NUDCD3-206ENST00000475952 TRAV22A0A0B4J277 110 aa5.28□□□□□ -1.56
NUDCD3-206ENST00000475952 FAM236AA0A1B0GUQ0 79 aa5.28□□□□□ -1.56
NUDCD3-206ENST00000475952 FAM236BA0A1B0GV22 79 aa5.28□□□□□ -1.56
NUDCD3-206ENST00000475952 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
NUDCD3-206ENST00000475952 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
NUDCD3-206ENST00000475952 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
NUDCD3-206ENST00000475952 HIST1H4AP62805 103 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms