RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SMIM26A0A096LP01 95 aa8.96□□□□□ -0.97
RPUSD3-215ENST00000475470 PLA2G1BP04054 148 aaKnown RBP8.96□□□□□ -0.98
RPUSD3-215ENST00000475470 C8orf17Q9NRJ1 99 aa8.96□□□□□ -0.98
RPUSD3-215ENST00000475470 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
RPUSD3-215ENST00000475470 RYR2Q92736 4967 aa8.94□□□□□ -0.98
RPUSD3-215ENST00000475470 ASB16-AS1Q495Z4 193 aa8.93□□□□□ -0.98
RPUSD3-215ENST00000475470 MP68P56378 58 aa8.92□□□□□ -0.98
RPUSD3-215ENST00000475470 DYNC1H1Q14204 4646 aaKnown RBP8.91□□□□□ -0.98
RPUSD3-215ENST00000475470 TYMSOSQ8TAI1 123 aa8.9□□□□□ -0.98
RPUSD3-215ENST00000475470 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
RPUSD3-215ENST00000475470 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
RPUSD3-215ENST00000475470 H0Y9P7 68 aa8.88□□□□□ -0.99
RPUSD3-215ENST00000475470 NOTCH2NLQ7Z3S9 236 aa8.88□□□□□ -0.99
RPUSD3-215ENST00000475470 MPLKIPQ8TAP9 179 aa8.88□□□□□ -0.99
RPUSD3-215ENST00000475470 KMT2CQ8NEZ4 4911 aaKnown RBP8.87□□□□□ -0.99
RPUSD3-215ENST00000475470 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
RPUSD3-215ENST00000475470 NDUFS5O43920 106 aa8.86□□□□□ -0.99
RPUSD3-215ENST00000475470 LINC00208Q96KT6 92 aa8.86□□□□□ -0.99
RPUSD3-215ENST00000475470 MRPL34Q9BQ48 92 aaKnown RBP8.86□□□□□ -0.99
RPUSD3-215ENST00000475470 TP53AIP1Q9HCN2 124 aa8.86□□□□□ -0.99
RPUSD3-215ENST00000475470 C1orf195Q5TG92 126 aa8.85□□□□□ -0.99
RPUSD3-215ENST00000475470 PRR4Q16378 134 aa8.84□□□□□ -0.99
RPUSD3-215ENST00000475470 H3BPC8 53 aa8.84□□□□□ -0.99
RPUSD3-215ENST00000475470 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
RPUSD3-215ENST00000475470 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
RPUSD3-215ENST00000475470 C8orf87E5RJ46 101 aa8.81□□□□□ -1
RPUSD3-215ENST00000475470 SPINK1P00995 79 aa8.81□□□□□ -1
RPUSD3-215ENST00000475470 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
RPUSD3-215ENST00000475470 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
RPUSD3-215ENST00000475470 APOBP04114 4563 aaKnown RBP8.79□□□□□ -1
RPUSD3-215ENST00000475470 LINC00313P59037 77 aa8.78□□□□□ -1
RPUSD3-215ENST00000475470 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
RPUSD3-215ENST00000475470 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
RPUSD3-215ENST00000475470 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
RPUSD3-215ENST00000475470 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
RPUSD3-215ENST00000475470 FAT1Q14517 4588 aa8.71□□□□□ -1.01
RPUSD3-215ENST00000475470 BRK1Q8WUW1 75 aa8.71□□□□□ -1.01
RPUSD3-215ENST00000475470 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.02
RPUSD3-215ENST00000475470 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
RPUSD3-215ENST00000475470 Q5W150 140 aa8.66□□□□□ -1.02
RPUSD3-215ENST00000475470 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
RPUSD3-215ENST00000475470 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
RPUSD3-215ENST00000475470 PCOTHQ58A44 107 aa8.65□□□□□ -1.02
RPUSD3-215ENST00000475470 KRTAP16-1A8MUX0 517 aa8.64□□□□□ -1.03
RPUSD3-215ENST00000475470 RYR3Q15413 4870 aa8.64□□□□□ -1.03
RPUSD3-215ENST00000475470 Q1T7F1 81 aa8.63□□□□□ -1.03
RPUSD3-215ENST00000475470 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
RPUSD3-215ENST00000475470 LOC101927531A0A1B0GV80 90 aa8.62□□□□□ -1.03
RPUSD3-215ENST00000475470 PSPHP1O15172 72 aa8.62□□□□□ -1.03
RPUSD3-215ENST00000475470 Q5VSD8 79 aa8.61□□□□□ -1.03
RPUSD3-215ENST00000475470 RETNLBQ9BQ08 111 aa8.59□□□□□ -1.03
RPUSD3-215ENST00000475470 IGLV7-46A0A075B6I9 117 aa8.59□□□□□ -1.03
RPUSD3-215ENST00000475470 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
RPUSD3-215ENST00000475470 A8MUN3 132 aa8.53□□□□□ -1.04
RPUSD3-215ENST00000475470 HSPG2P98160 4391 aa8.51□□□□□ -1.05
RPUSD3-215ENST00000475470 COA5Q86WW8 74 aa8.49□□□□□ -1.05
RPUSD3-215ENST00000475470 Q8N1X5 172 aa8.49□□□□□ -1.05
RPUSD3-215ENST00000475470 RYR1P21817 5038 aa8.49□□□□□ -1.05
RPUSD3-215ENST00000475470 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
RPUSD3-215ENST00000475470 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
RPUSD3-215ENST00000475470 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
RPUSD3-215ENST00000475470 V9GYY9 64 aa8.48□□□□□ -1.05
RPUSD3-215ENST00000475470 Q5VV11 94 aa8.45□□□□□ -1.06
RPUSD3-215ENST00000475470 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
RPUSD3-215ENST00000475470 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
RPUSD3-215ENST00000475470 HRES1P13985 223 aa8.43□□□□□ -1.06
RPUSD3-215ENST00000475470 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
RPUSD3-215ENST00000475470 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
RPUSD3-215ENST00000475470 A8MU10 97 aa8.4□□□□□ -1.06
RPUSD3-215ENST00000475470 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.06
RPUSD3-215ENST00000475470 CHKB-CPT1BH3BT56 60 aa8.4□□□□□ -1.07
RPUSD3-215ENST00000475470 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.07
RPUSD3-215ENST00000475470 KIAA1109Q2LD37 5005 aa8.39□□□□□ -1.07
RPUSD3-215ENST00000475470 A8MUU9 505 aa8.39□□□□□ -1.07
RPUSD3-215ENST00000475470 TNXBP22105 4242 aa8.37□□□□□ -1.07
RPUSD3-215ENST00000475470 ACYP2P14621 99 aa8.35□□□□□ -1.07
RPUSD3-215ENST00000475470 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
RPUSD3-215ENST00000475470 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
RPUSD3-215ENST00000475470 EPPK1P58107 5090 aaKnown RBP8.33□□□□□ -1.08
RPUSD3-215ENST00000475470 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
RPUSD3-215ENST00000475470 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
RPUSD3-215ENST00000475470 Q75L30 129 aa8.29□□□□□ -1.08
RPUSD3-215ENST00000475470 A6NED7 52 aa8.28□□□□□ -1.08
RPUSD3-215ENST00000475470 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.08
RPUSD3-215ENST00000475470 LINC01558Q9Y6Z2 57 aa8.27□□□□□ -1.09
RPUSD3-215ENST00000475470 LCA10Q71F78 164 aa8.24□□□□□ -1.09
RPUSD3-215ENST00000475470 SPTSSBQ8NFR3 76 aa8.22□□□□□ -1.09
RPUSD3-215ENST00000475470 MYCBP2O75592 4640 aa8.21□□□□□ -1.09
RPUSD3-215ENST00000475470 SEC61GP60059 68 aa8.21□□□□□ -1.1
RPUSD3-215ENST00000475470 PMAIP1Q13794 54 aa8.21□□□□□ -1.1
RPUSD3-215ENST00000475470 SPINK7P58062 85 aa8.2□□□□□ -1.1
RPUSD3-215ENST00000475470 ATP11AUNQ6ZP68 121 aa8.19□□□□□ -1.1
RPUSD3-215ENST00000475470 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
RPUSD3-215ENST00000475470 XP32Q5T750 250 aa8.15□□□□□ -1.1
RPUSD3-215ENST00000475470 RPL37P61927 97 aaKnown RBP8.15□□□□□ -1.1
RPUSD3-215ENST00000475470 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
RPUSD3-215ENST00000475470 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
RPUSD3-215ENST00000475470 A6NN06 94 aa8.03□□□□□ -1.12
RPUSD3-215ENST00000475470 TPRXLQ17RH7 258 aa8.02□□□□□ -1.13
RPUSD3-215ENST00000475470 COX6B2Q6YFQ2 88 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms