RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 FAT1Q14517 4588 aa10.56□□□□□ -0.72
SEC61A2-213ENST00000475268 C4orf48Q5BLP8 95 aa10.56□□□□□ -0.72
SEC61A2-213ENST00000475268 Q5XG85 94 aa10.55□□□□□ -0.72
SEC61A2-213ENST00000475268 NOTCH2NLQ7Z3S9 236 aa10.55□□□□□ -0.72
SEC61A2-213ENST00000475268 RYR3Q15413 4870 aa10.54□□□□□ -0.72
SEC61A2-213ENST00000475268 NDUFC1O43677 76 aa10.53□□□□□ -0.72
SEC61A2-213ENST00000475268 LIMD2Q9BT23 127 aa10.53□□□□□ -0.72
SEC61A2-213ENST00000475268 C1orf195Q5TG92 126 aa10.52□□□□□ -0.72
SEC61A2-213ENST00000475268 SPINK1P00995 79 aa10.49□□□□□ -0.73
SEC61A2-213ENST00000475268 MP68P56378 58 aa10.49□□□□□ -0.73
SEC61A2-213ENST00000475268 NDUFS5O43920 106 aa10.48□□□□□ -0.73
SEC61A2-213ENST00000475268 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
SEC61A2-213ENST00000475268 FAM236DA0A1B0GTK5 79 aa10.47□□□□□ -0.73
SEC61A2-213ENST00000475268 FAM236CP0DP71 79 aa10.47□□□□□ -0.73
SEC61A2-213ENST00000475268 LINC00304Q8N9R0 145 aa10.47□□□□□ -0.73
SEC61A2-213ENST00000475268 H0Y9P7 68 aa10.46□□□□□ -0.73
SEC61A2-213ENST00000475268 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.74
SEC61A2-213ENST00000475268 LINC00208Q96KT6 92 aa10.44□□□□□ -0.74
SEC61A2-213ENST00000475268 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
SEC61A2-213ENST00000475268 TP53AIP1Q9HCN2 124 aa10.43□□□□□ -0.74
SEC61A2-213ENST00000475268 C8orf87E5RJ46 101 aa10.42□□□□□ -0.74
SEC61A2-213ENST00000475268 TRAV22A0A0B4J277 110 aa10.42□□□□□ -0.74
SEC61A2-213ENST00000475268 LINC00313P59037 77 aa10.41□□□□□ -0.74
SEC61A2-213ENST00000475268 SPAG11AQ6PDA7 123 aa10.41□□□□□ -0.74
SEC61A2-213ENST00000475268 H3BPC8 53 aa10.37□□□□□ -0.75
SEC61A2-213ENST00000475268 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
SEC61A2-213ENST00000475268 C1orf64Q8NEQ6 169 aa10.37□□□□□ -0.75
SEC61A2-213ENST00000475268 Q5VSD8 79 aa10.36□□□□□ -0.75
SEC61A2-213ENST00000475268 RPS28P62857 69 aaKnown RBP10.34□□□□□ -0.75
SEC61A2-213ENST00000475268 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
SEC61A2-213ENST00000475268 HSPG2P98160 4391 aa10.32□□□□□ -0.76
SEC61A2-213ENST00000475268 OXTP01178 125 aa10.28□□□□□ -0.76
SEC61A2-213ENST00000475268 SERP1Q9Y6X1 66 aa10.28□□□□□ -0.76
SEC61A2-213ENST00000475268 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.77
SEC61A2-213ENST00000475268 KRTAP16-1A8MUX0 517 aa10.27□□□□□ -0.77
SEC61A2-213ENST00000475268 Q5W150 140 aa10.27□□□□□ -0.77
SEC61A2-213ENST00000475268 Q8N9P0 234 aaPredicted RBP10.26□□□□□ -0.77
SEC61A2-213ENST00000475268 RYR1P21817 5038 aa10.26□□□□□ -0.77
SEC61A2-213ENST00000475268 PRR4Q16378 134 aa10.24□□□□□ -0.77
SEC61A2-213ENST00000475268 KRTAP17-1Q9BYP8 105 aa10.24□□□□□ -0.77
SEC61A2-213ENST00000475268 KRTAP13-3Q3SY46 172 aa10.21□□□□□ -0.77
SEC61A2-213ENST00000475268 PCOTHQ58A44 107 aa10.21□□□□□ -0.78
SEC61A2-213ENST00000475268 RETNLBQ9BQ08 111 aa10.2□□□□□ -0.78
SEC61A2-213ENST00000475268 Q8N1X5 172 aa10.18□□□□□ -0.78
SEC61A2-213ENST00000475268 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
SEC61A2-213ENST00000475268 LRP1Q07954 4544 aaKnown RBP10.18□□□□□ -0.78
SEC61A2-213ENST00000475268 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
SEC61A2-213ENST00000475268 KRTAP10-8P60410 259 aa10.16□□□□□ -0.78
SEC61A2-213ENST00000475268 SPANXA2-OT1Q8N9U9 137 aa10.16□□□□□ -0.78
SEC61A2-213ENST00000475268 LOC101927531A0A1B0GV80 90 aa10.16□□□□□ -0.78
SEC61A2-213ENST00000475268 CYP4F30PQ9H0H9 118 aa10.15□□□□□ -0.79
SEC61A2-213ENST00000475268 C9orf92A6NGG3 77 aa10.12□□□□□ -0.79
SEC61A2-213ENST00000475268 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
SEC61A2-213ENST00000475268 TNXBP22105 4242 aa10.1□□□□□ -0.79
SEC61A2-213ENST00000475268 IGLV7-46A0A075B6I9 117 aa10.09□□□□□ -0.79
SEC61A2-213ENST00000475268 SMIM26A0A096LP01 95 aa10.05□□□□□ -0.8
SEC61A2-213ENST00000475268 IGKV2-30P06310 120 aa10.04□□□□□ -0.8
SEC61A2-213ENST00000475268 FAT3Q8TDW7 4589 aa10.04□□□□□ -0.8
SEC61A2-213ENST00000475268 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
SEC61A2-213ENST00000475268 FP248Q71RG6 208 aaPredicted RBP9.99□□□□□ -0.81
SEC61A2-213ENST00000475268 MYCBP2O75592 4640 aa9.99□□□□□ -0.81
SEC61A2-213ENST00000475268 C20orf166-AS1Q96NR2 134 aa9.98□□□□□ -0.81
SEC61A2-213ENST00000475268 A8MUU9 505 aa9.97□□□□□ -0.81
SEC61A2-213ENST00000475268 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
SEC61A2-213ENST00000475268 HRES1P13985 223 aa9.97□□□□□ -0.81
SEC61A2-213ENST00000475268 DMBT1Q9UGM3 2413 aaPredicted RBP9.96□□□□□ -0.81
SEC61A2-213ENST00000475268 COA5Q86WW8 74 aa9.93□□□□□ -0.82
SEC61A2-213ENST00000475268 C4orf26Q17RF5 130 aa9.92□□□□□ -0.82
SEC61A2-213ENST00000475268 MPLKIPQ8TAP9 179 aa9.92□□□□□ -0.82
SEC61A2-213ENST00000475268 KRTAP4-5Q9BYR2 181 aa9.9□□□□□ -0.83
SEC61A2-213ENST00000475268 C7orf65Q6ZTY9 151 aa9.88□□□□□ -0.83
SEC61A2-213ENST00000475268 Q75L30 129 aa9.85□□□□□ -0.83
SEC61A2-213ENST00000475268 DMAC1Q96GE9 116 aa9.83□□□□□ -0.84
SEC61A2-213ENST00000475268 ACYP2P14621 99 aa9.82□□□□□ -0.84
SEC61A2-213ENST00000475268 Q1T7F1 81 aa9.78□□□□□ -0.84
SEC61A2-213ENST00000475268 XP32Q5T750 250 aa9.75□□□□□ -0.85
SEC61A2-213ENST00000475268 SPINK7P58062 85 aa9.74□□□□□ -0.85
SEC61A2-213ENST00000475268 ATP11AUNQ6ZP68 121 aa9.74□□□□□ -0.85
SEC61A2-213ENST00000475268 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.85
SEC61A2-213ENST00000475268 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
SEC61A2-213ENST00000475268 V9GYY9 64 aa9.71□□□□□ -0.86
SEC61A2-213ENST00000475268 PSPHP1O15172 72 aa9.68□□□□□ -0.86
SEC61A2-213ENST00000475268 ABCA13Q86UQ4 5058 aa9.65□□□□□ -0.86
SEC61A2-213ENST00000475268 A8MUN3 132 aa9.63□□□□□ -0.87
SEC61A2-213ENST00000475268 BIRC6Q9NR09 4857 aa9.61□□□□□ -0.87
SEC61A2-213ENST00000475268 TPRXLQ17RH7 258 aa9.6□□□□□ -0.87
SEC61A2-213ENST00000475268 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
SEC61A2-213ENST00000475268 J3QL48 77 aa9.59□□□□□ -0.87
SEC61A2-213ENST00000475268 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
SEC61A2-213ENST00000475268 HERC2O95714 4834 aa9.56□□□□□ -0.88
SEC61A2-213ENST00000475268 KRTAP3-1Q9BYR8 98 aa9.56□□□□□ -0.88
SEC61A2-213ENST00000475268 Q5VV11 94 aa9.54□□□□□ -0.88
SEC61A2-213ENST00000475268 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
SEC61A2-213ENST00000475268 LPAP08519 4548 aa9.48□□□□□ -0.89
SEC61A2-213ENST00000475268 BRK1Q8WUW1 75 aa9.47□□□□□ -0.89
SEC61A2-213ENST00000475268 LRP2P98164 4655 aa9.46□□□□□ -0.89
SEC61A2-213ENST00000475268 A0A1B0GU69 56 aa9.39□□□□□ -0.91
SEC61A2-213ENST00000475268 SPTSSBQ8NFR3 76 aa9.39□□□□□ -0.91
SEC61A2-213ENST00000475268 A6NED7 52 aa9.36□□□□□ -0.91
SEC61A2-213ENST00000475268 PRO0628Q9UI54 55 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms