RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 H3BQ85 93 aa4.95□□□□□ -1.62
PDPN-204ENST00000475043 TMEM256-PLSCR3K7ERE1 68 aa4.95□□□□□ -1.62
PDPN-204ENST00000475043 M0R2T5 61 aa4.94□□□□□ -1.62
PDPN-204ENST00000475043 SIGMAR1Q99720 223 aa4.94□□□□□ -1.62
PDPN-204ENST00000475043 SCGB1C2P0DMR2 95 aa4.93□□□□□ -1.62
PDPN-204ENST00000475043 DSCR10P59022 87 aa4.93□□□□□ -1.62
PDPN-204ENST00000475043 TRBV7-4A0A0J9YYF1 115 aa4.92□□□□□ -1.62
PDPN-204ENST00000475043 CCKP06307 115 aa4.92□□□□□ -1.62
PDPN-204ENST00000475043 IGKV4-1P06312 121 aa4.92□□□□□ -1.62
PDPN-204ENST00000475043 TRACP01848 142 aa4.91□□□□□ -1.62
PDPN-204ENST00000475043 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
PDPN-204ENST00000475043 A8MUU9 505 aa4.9□□□□□ -1.63
PDPN-204ENST00000475043 SEC61GP60059 68 aa4.9□□□□□ -1.63
PDPN-204ENST00000475043 UBE2V1Q13404 147 aa4.9□□□□□ -1.63
PDPN-204ENST00000475043 DEFB116Q30KQ4 102 aa4.9□□□□□ -1.63
PDPN-204ENST00000475043 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
PDPN-204ENST00000475043 LINC00313P59037 77 aa4.89□□□□□ -1.63
PDPN-204ENST00000475043 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
PDPN-204ENST00000475043 RBM3P98179 157 aaKnown RBP4.87□□□□□ -1.63
PDPN-204ENST00000475043 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
PDPN-204ENST00000475043 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
PDPN-204ENST00000475043 IGHV6-1A0A0B4J1U7 121 aa4.86□□□□□ -1.63
PDPN-204ENST00000475043 PCP4L1A6NKN8 68 aa4.86□□□□□ -1.63
PDPN-204ENST00000475043 BAALC-AS2P0C853 105 aa4.86□□□□□ -1.63
PDPN-204ENST00000475043 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
PDPN-204ENST00000475043 M0R143 59 aa4.85□□□□□ -1.63
PDPN-204ENST00000475043 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
PDPN-204ENST00000475043 C9JAW5 83 aa4.84□□□□□ -1.63
PDPN-204ENST00000475043 NAA38Q9BRA0 125 aaKnown RBP4.84□□□□□ -1.63
PDPN-204ENST00000475043 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
PDPN-204ENST00000475043 ATXN8Q156A1 80 aa4.83□□□□□ -1.64
PDPN-204ENST00000475043 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
PDPN-204ENST00000475043 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
PDPN-204ENST00000475043 C8orf87E5RJ46 101 aa4.8□□□□□ -1.64
PDPN-204ENST00000475043 SMIM6P0DI80 62 aa4.8□□□□□ -1.64
PDPN-204ENST00000475043 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
PDPN-204ENST00000475043 FSIP2Q5CZC0 6907 aa4.79□□□□□ -1.64
PDPN-204ENST00000475043 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
PDPN-204ENST00000475043 JMJD7-PLA2G4BH0Y9G9 81 aa4.79□□□□□ -1.64
PDPN-204ENST00000475043 J3KT08 172 aa4.79□□□□□ -1.64
PDPN-204ENST00000475043 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
PDPN-204ENST00000475043 Q6ZQT0 140 aa4.79□□□□□ -1.64
PDPN-204ENST00000475043 BATFQ16520 125 aa4.78□□□□□ -1.64
PDPN-204ENST00000475043 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
PDPN-204ENST00000475043 TSTD3H0UI37 97 aa4.77□□□□□ -1.65
PDPN-204ENST00000475043 NDUFB1O75438 58 aa4.77□□□□□ -1.65
PDPN-204ENST00000475043 LYRM7Q5U5X0 104 aa4.77□□□□□ -1.65
PDPN-204ENST00000475043 RBM12B-AS1Q9P1G2 102 aa4.77□□□□□ -1.65
PDPN-204ENST00000475043 LOC110117498A0A087WWA1 95 aa4.76□□□□□ -1.65
PDPN-204ENST00000475043 C14orf132Q9NPU4 83 aa4.76□□□□□ -1.65
PDPN-204ENST00000475043 PDE6GP18545 87 aa4.75□□□□□ -1.65
PDPN-204ENST00000475043 A0A1B0GW54 56 aa4.74□□□□□ -1.65
PDPN-204ENST00000475043 HRES1P13985 223 aa4.74□□□□□ -1.65
PDPN-204ENST00000475043 A8MWP4 228 aa4.73□□□□□ -1.65
PDPN-204ENST00000475043 ZCCHC13Q8WW36 166 aaKnown RBP4.73□□□□□ -1.65
PDPN-204ENST00000475043 NREPQ16612 68 aa4.72□□□□□ -1.65
PDPN-204ENST00000475043 C8orf17Q9NRJ1 99 aa4.72□□□□□ -1.65
PDPN-204ENST00000475043 IGKV3D-7A0A0C4DH55 119 aa4.71□□□□□ -1.66
PDPN-204ENST00000475043 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
PDPN-204ENST00000475043 SPINK7P58062 85 aa4.7□□□□□ -1.66
PDPN-204ENST00000475043 MTURNQ8N3F0 131 aa4.7□□□□□ -1.66
PDPN-204ENST00000475043 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
PDPN-204ENST00000475043 Q6ZVQ6 151 aa4.69□□□□□ -1.66
PDPN-204ENST00000475043 A0A1W2PPM0 123 aa4.68□□□□□ -1.66
PDPN-204ENST00000475043 H3BT86 120 aa4.68□□□□□ -1.66
PDPN-204ENST00000475043 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
PDPN-204ENST00000475043 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
PDPN-204ENST00000475043 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
PDPN-204ENST00000475043 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
PDPN-204ENST00000475043 K7EQZ3 153 aa4.64□□□□□ -1.67
PDPN-204ENST00000475043 NDUFS5O43920 106 aa4.64□□□□□ -1.67
PDPN-204ENST00000475043 MT2AP02795 61 aa4.64□□□□□ -1.67
PDPN-204ENST00000475043 WFDC13Q8IUB5 93 aa4.64□□□□□ -1.67
PDPN-204ENST00000475043 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
PDPN-204ENST00000475043 hDV103S1A0JD37 113 aa4.63□□□□□ -1.67
PDPN-204ENST00000475043 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
PDPN-204ENST00000475043 TMEM254Q8TBM7 123 aa4.63□□□□□ -1.67
PDPN-204ENST00000475043 BPY2O14599 106 aa4.62□□□□□ -1.67
PDPN-204ENST00000475043 SPCS1Q9Y6A9 102 aa4.62□□□□□ -1.67
PDPN-204ENST00000475043 MT1FP04733 61 aa4.61□□□□□ -1.67
PDPN-204ENST00000475043 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
PDPN-204ENST00000475043 V9GYY9 64 aa4.61□□□□□ -1.67
PDPN-204ENST00000475043 Q8N9L7 120 aa4.58□□□□□ -1.68
PDPN-204ENST00000475043 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
PDPN-204ENST00000475043 A0A1B0GV90 55 aa4.56□□□□□ -1.68
PDPN-204ENST00000475043 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
PDPN-204ENST00000475043 COL5A1-AS1Q5SY13 56 aa4.56□□□□□ -1.68
PDPN-204ENST00000475043 CASC2Q6XLA1 102 aa4.56□□□□□ -1.68
PDPN-204ENST00000475043 HCG22E2RYF7 251 aa4.54□□□□□ -1.68
PDPN-204ENST00000475043 Q5W150 140 aa4.54□□□□□ -1.68
PDPN-204ENST00000475043 H1FX-AS1Q4G0G2 97 aa4.53□□□□□ -1.68
PDPN-204ENST00000475043 C7orf65Q6ZTY9 151 aa4.53□□□□□ -1.68
PDPN-204ENST00000475043 UBL5Q9BZL1 73 aa4.53□□□□□ -1.68
PDPN-204ENST00000475043 K7EP34 96 aa4.52□□□□□ -1.69
PDPN-204ENST00000475043 SCGB1A1P11684 91 aa4.52□□□□□ -1.69
PDPN-204ENST00000475043 LINC00846Q9NV44 126 aa4.52□□□□□ -1.69
PDPN-204ENST00000475043 PRO0461Q9UI25 63 aa4.52□□□□□ -1.69
PDPN-204ENST00000475043 USH2AO75445 5202 aa4.5□□□□□ -1.69
PDPN-204ENST00000475043 CXCL6P80162 114 aa4.5□□□□□ -1.69
PDPN-204ENST00000475043 C4orf26Q17RF5 130 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms