RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MRPL34Q9BQ48 92 aaKnown RBP5.68□□□□□ -1.5
USP39-214ENST00000474572 TP53AIP1Q9HCN2 124 aa5.68□□□□□ -1.5
USP39-214ENST00000474572 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
USP39-214ENST00000474572 TRAV22A0A0B4J277 110 aa5.67□□□□□ -1.5
USP39-214ENST00000474572 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
USP39-214ENST00000474572 DYNC1H1Q14204 4646 aaKnown RBP5.66□□□□□ -1.5
USP39-214ENST00000474572 KRTAP10-4P60372 401 aaPredicted RBP5.65□□□□□ -1.5
USP39-214ENST00000474572 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
USP39-214ENST00000474572 LINC00208Q96KT6 92 aa5.65□□□□□ -1.5
USP39-214ENST00000474572 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.5
USP39-214ENST00000474572 C1orf195Q5TG92 126 aa5.64□□□□□ -1.51
USP39-214ENST00000474572 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
USP39-214ENST00000474572 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
USP39-214ENST00000474572 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
USP39-214ENST00000474572 SPANXA2-OT1Q8N9U9 137 aa5.62□□□□□ -1.51
USP39-214ENST00000474572 RYR2Q92736 4967 aa5.62□□□□□ -1.51
USP39-214ENST00000474572 C1orf64Q8NEQ6 169 aa5.61□□□□□ -1.51
USP39-214ENST00000474572 TYMSOSQ8TAI1 123 aa5.61□□□□□ -1.51
USP39-214ENST00000474572 APOBP04114 4563 aaKnown RBP5.6□□□□□ -1.51
USP39-214ENST00000474572 SPINK1P00995 79 aa5.6□□□□□ -1.51
USP39-214ENST00000474572 KRTAP13-3Q3SY46 172 aa5.6□□□□□ -1.51
USP39-214ENST00000474572 SMIM26A0A096LP01 95 aa5.59□□□□□ -1.51
USP39-214ENST00000474572 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
USP39-214ENST00000474572 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
USP39-214ENST00000474572 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
USP39-214ENST00000474572 SMR3BP02814 79 aaPredicted RBP5.57□□□□□ -1.52
USP39-214ENST00000474572 LINC00313P59037 77 aa5.57□□□□□ -1.52
USP39-214ENST00000474572 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
USP39-214ENST00000474572 NDUFS5O43920 106 aa5.56□□□□□ -1.52
USP39-214ENST00000474572 C4orf48Q5BLP8 95 aa5.56□□□□□ -1.52
USP39-214ENST00000474572 PRR26Q8N8Z3 221 aa5.56□□□□□ -1.52
USP39-214ENST00000474572 FP248Q71RG6 208 aaPredicted RBP5.55□□□□□ -1.52
USP39-214ENST00000474572 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
USP39-214ENST00000474572 PKHD1P08F94 4074 aa5.55□□□□□ -1.52
USP39-214ENST00000474572 IGLV7-46A0A075B6I9 117 aa5.54□□□□□ -1.52
USP39-214ENST00000474572 Q5W150 140 aa5.54□□□□□ -1.52
USP39-214ENST00000474572 LOC101927531A0A1B0GV80 90 aa5.53□□□□□ -1.52
USP39-214ENST00000474572 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
USP39-214ENST00000474572 FAM229AH3BQW9 127 aa5.51□□□□□ -1.53
USP39-214ENST00000474572 PRR4Q16378 134 aa5.5□□□□□ -1.53
USP39-214ENST00000474572 PCOTHQ58A44 107 aa5.49□□□□□ -1.53
USP39-214ENST00000474572 FAT1Q14517 4588 aa5.48□□□□□ -1.53
USP39-214ENST00000474572 C4orf26Q17RF5 130 aa5.48□□□□□ -1.53
USP39-214ENST00000474572 KMT2CQ8NEZ4 4911 aaKnown RBP5.47□□□□□ -1.53
USP39-214ENST00000474572 V9GYY9 64 aa5.47□□□□□ -1.53
USP39-214ENST00000474572 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
USP39-214ENST00000474572 Q1T7F1 81 aa5.44□□□□□ -1.54
USP39-214ENST00000474572 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
USP39-214ENST00000474572 COA5Q86WW8 74 aa5.42□□□□□ -1.54
USP39-214ENST00000474572 KRTAP10-8P60410 259 aa5.41□□□□□ -1.54
USP39-214ENST00000474572 Q5VSD8 79 aa5.41□□□□□ -1.54
USP39-214ENST00000474572 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.54
USP39-214ENST00000474572 A8MUU9 505 aa5.39□□□□□ -1.55
USP39-214ENST00000474572 HRES1P13985 223 aa5.39□□□□□ -1.55
USP39-214ENST00000474572 MPLKIPQ8TAP9 179 aa5.39□□□□□ -1.55
USP39-214ENST00000474572 DMAC1Q96GE9 116 aa5.38□□□□□ -1.55
USP39-214ENST00000474572 HSPG2P98160 4391 aa5.37□□□□□ -1.55
USP39-214ENST00000474572 RETNLBQ9BQ08 111 aa5.37□□□□□ -1.55
USP39-214ENST00000474572 Q8N1X5 172 aa5.36□□□□□ -1.55
USP39-214ENST00000474572 RYR3Q15413 4870 aa5.35□□□□□ -1.55
USP39-214ENST00000474572 KRTAP17-1Q9BYP8 105 aa5.35□□□□□ -1.55
USP39-214ENST00000474572 RYR1P21817 5038 aa5.35□□□□□ -1.55
USP39-214ENST00000474572 ACYP2P14621 99 aa5.34□□□□□ -1.55
USP39-214ENST00000474572 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
USP39-214ENST00000474572 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
USP39-214ENST00000474572 FLG2Q5D862 2391 aaPredicted RBP5.32□□□□□ -1.56
USP39-214ENST00000474572 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
USP39-214ENST00000474572 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
USP39-214ENST00000474572 TNXBP22105 4242 aa5.31□□□□□ -1.56
USP39-214ENST00000474572 Q75L30 129 aa5.3□□□□□ -1.56
USP39-214ENST00000474572 LINC01558Q9Y6Z2 57 aa5.3□□□□□ -1.56
USP39-214ENST00000474572 Q5VV11 94 aa5.29□□□□□ -1.56
USP39-214ENST00000474572 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
USP39-214ENST00000474572 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
USP39-214ENST00000474572 A8MUN3 132 aa5.27□□□□□ -1.57
USP39-214ENST00000474572 PSPHP1O15172 72 aa5.26□□□□□ -1.57
USP39-214ENST00000474572 LRP1Q07954 4544 aaKnown RBP5.26□□□□□ -1.57
USP39-214ENST00000474572 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
USP39-214ENST00000474572 KIAA1109Q2LD37 5005 aa5.22□□□□□ -1.57
USP39-214ENST00000474572 CHKB-CPT1BH3BT56 60 aa5.22□□□□□ -1.57
USP39-214ENST00000474572 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
USP39-214ENST00000474572 SPINK7P58062 85 aa5.2□□□□□ -1.58
USP39-214ENST00000474572 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
USP39-214ENST00000474572 XP32Q5T750 250 aa5.18□□□□□ -1.58
USP39-214ENST00000474572 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
USP39-214ENST00000474572 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
USP39-214ENST00000474572 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
USP39-214ENST00000474572 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
USP39-214ENST00000474572 ATP11AUNQ6ZP68 121 aa5.14□□□□□ -1.59
USP39-214ENST00000474572 TPRXLQ17RH7 258 aa5.12□□□□□ -1.59
USP39-214ENST00000474572 A6NED7 52 aa5.1□□□□□ -1.59
USP39-214ENST00000474572 LCA10Q71F78 164 aa5.1□□□□□ -1.59
USP39-214ENST00000474572 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
USP39-214ENST00000474572 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
USP39-214ENST00000474572 A0A1B0GU69 56 aa5.09□□□□□ -1.59
USP39-214ENST00000474572 A8MU10 97 aa5.08□□□□□ -1.6
USP39-214ENST00000474572 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
USP39-214ENST00000474572 SEC61GP60059 68 aa5.05□□□□□ -1.6
USP39-214ENST00000474572 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
USP39-214ENST00000474572 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms