RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 IGKV3D-7A0A0C4DH55 119 aa7.49□□□□□ -1.21
BRAT1-205ENST00000473879 NDUFB1O75438 58 aa7.48□□□□□ -1.21
BRAT1-205ENST00000473879 A8MWP4 228 aa7.47□□□□□ -1.21
BRAT1-205ENST00000473879 RETNLBQ9BQ08 111 aa7.47□□□□□ -1.21
BRAT1-205ENST00000473879 DSCR10P59022 87 aa7.46□□□□□ -1.22
BRAT1-205ENST00000473879 MT-ATP8P03928 68 aa7.44□□□□□ -1.22
BRAT1-205ENST00000473879 K7EQZ3 153 aa7.43□□□□□ -1.22
BRAT1-205ENST00000473879 HIST1H4AP62805 103 aaKnown RBP7.43□□□□□ -1.22
BRAT1-205ENST00000473879 FP248Q71RG6 208 aaPredicted RBP7.43□□□□□ -1.22
BRAT1-205ENST00000473879 IMUPQ9GZP8 106 aa7.43□□□□□ -1.22
BRAT1-205ENST00000473879 MUC17Q685J3 4493 aa7.42□□□□□ -1.22
BRAT1-205ENST00000473879 IGLV7-46A0A075B6I9 117 aa7.42□□□□□ -1.22
BRAT1-205ENST00000473879 A0A1B0GVX0 72 aa7.42□□□□□ -1.22
BRAT1-205ENST00000473879 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
BRAT1-205ENST00000473879 PRR15Q8IV56 129 aa7.42□□□□□ -1.22
BRAT1-205ENST00000473879 Q8N9L7 120 aa7.41□□□□□ -1.22
BRAT1-205ENST00000473879 MUC2Q02817 5179 aa7.4□□□□□ -1.22
BRAT1-205ENST00000473879 IGHV6-1A0A0B4J1U7 121 aa7.39□□□□□ -1.23
BRAT1-205ENST00000473879 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
BRAT1-205ENST00000473879 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
BRAT1-205ENST00000473879 A0A087WVE0 104 aa7.35□□□□□ -1.23
BRAT1-205ENST00000473879 HCG22E2RYF7 251 aa7.34□□□□□ -1.23
BRAT1-205ENST00000473879 LINC00313P59037 77 aa7.34□□□□□ -1.23
BRAT1-205ENST00000473879 MMP24-AS1A0A0U1RRL7 71 aa7.33□□□□□ -1.24
BRAT1-205ENST00000473879 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
BRAT1-205ENST00000473879 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
BRAT1-205ENST00000473879 CASC2Q6XLA1 102 aa7.31□□□□□ -1.24
BRAT1-205ENST00000473879 WFDC13Q8IUB5 93 aa7.3□□□□□ -1.24
BRAT1-205ENST00000473879 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
BRAT1-205ENST00000473879 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
BRAT1-205ENST00000473879 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
BRAT1-205ENST00000473879 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
BRAT1-205ENST00000473879 NOTCH2NLQ7Z3S9 236 aa7.28□□□□□ -1.24
BRAT1-205ENST00000473879 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
BRAT1-205ENST00000473879 SCGB1A1P11684 91 aa7.25□□□□□ -1.25
BRAT1-205ENST00000473879 A0A0U1RQV1 116 aa7.24□□□□□ -1.25
BRAT1-205ENST00000473879 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
BRAT1-205ENST00000473879 ATOX1O00244 68 aa7.22□□□□□ -1.25
BRAT1-205ENST00000473879 NDUFS5O43920 106 aa7.21□□□□□ -1.26
BRAT1-205ENST00000473879 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
BRAT1-205ENST00000473879 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
BRAT1-205ENST00000473879 SMIM20Q8N5G0 67 aa7.19□□□□□ -1.26
BRAT1-205ENST00000473879 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
BRAT1-205ENST00000473879 TP53AIP1Q9HCN2 124 aa7.19□□□□□ -1.26
BRAT1-205ENST00000473879 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
BRAT1-205ENST00000473879 XP32Q5T750 250 aa7.18□□□□□ -1.26
BRAT1-205ENST00000473879 A8MUU9 505 aa7.17□□□□□ -1.26
BRAT1-205ENST00000473879 Q75L30 129 aa7.17□□□□□ -1.26
BRAT1-205ENST00000473879 UQCRQO14949 82 aa7.14□□□□□ -1.27
BRAT1-205ENST00000473879 OCR1Q9BZK8 76 aa7.14□□□□□ -1.27
BRAT1-205ENST00000473879 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
BRAT1-205ENST00000473879 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
BRAT1-205ENST00000473879 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
BRAT1-205ENST00000473879 ANAPC13Q9BS18 74 aa7.1□□□□□ -1.27
BRAT1-205ENST00000473879 TRAV22A0A0B4J277 110 aa7.09□□□□□ -1.27
BRAT1-205ENST00000473879 SERP2Q8N6R1 65 aa7.09□□□□□ -1.27
BRAT1-205ENST00000473879 ZCCHC13Q8WW36 166 aaKnown RBP7.09□□□□□ -1.27
BRAT1-205ENST00000473879 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
BRAT1-205ENST00000473879 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
BRAT1-205ENST00000473879 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
BRAT1-205ENST00000473879 MP68P56378 58 aa7.06□□□□□ -1.28
BRAT1-205ENST00000473879 H0Y9P7 68 aa7.05□□□□□ -1.28
BRAT1-205ENST00000473879 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
BRAT1-205ENST00000473879 H3BPC8 53 aa7.03□□□□□ -1.28
BRAT1-205ENST00000473879 COX7CP15954 63 aa7.03□□□□□ -1.28
BRAT1-205ENST00000473879 PCOTHQ58A44 107 aa7.03□□□□□ -1.28
BRAT1-205ENST00000473879 Q5W150 140 aa7.03□□□□□ -1.28
BRAT1-205ENST00000473879 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
BRAT1-205ENST00000473879 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
BRAT1-205ENST00000473879 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
BRAT1-205ENST00000473879 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
BRAT1-205ENST00000473879 C7orf65Q6ZTY9 151 aa6.96□□□□□ -1.3
BRAT1-205ENST00000473879 IGKV2-30P06310 120 aa6.95□□□□□ -1.3
BRAT1-205ENST00000473879 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
BRAT1-205ENST00000473879 KRTAP19-2Q3LHN2 52 aa6.93□□□□□ -1.3
BRAT1-205ENST00000473879 KLKP1Q107X0 134 aa6.92□□□□□ -1.3
BRAT1-205ENST00000473879 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
BRAT1-205ENST00000473879 CYP4F30PQ9H0H9 118 aa6.91□□□□□ -1.3
BRAT1-205ENST00000473879 SNURFQ9Y675 71 aa6.91□□□□□ -1.3
BRAT1-205ENST00000473879 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
BRAT1-205ENST00000473879 PCP4P48539 62 aa6.9□□□□□ -1.3
BRAT1-205ENST00000473879 SPINK7P58062 85 aa6.9□□□□□ -1.3
BRAT1-205ENST00000473879 NDUFC1O43677 76 aa6.87□□□□□ -1.31
BRAT1-205ENST00000473879 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
BRAT1-205ENST00000473879 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
BRAT1-205ENST00000473879 MT1HP80294 61 aa6.82□□□□□ -1.32
BRAT1-205ENST00000473879 H7BZZ5 65 aa6.79□□□□□ -1.32
BRAT1-205ENST00000473879 HRES1P13985 223 aa6.79□□□□□ -1.32
BRAT1-205ENST00000473879 CYSTM1Q9H1C7 97 aa6.79□□□□□ -1.32
BRAT1-205ENST00000473879 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
BRAT1-205ENST00000473879 COX6B2Q6YFQ2 88 aa6.76□□□□□ -1.33
BRAT1-205ENST00000473879 SPANXA2-OT1Q8N9U9 137 aa6.76□□□□□ -1.33
BRAT1-205ENST00000473879 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
BRAT1-205ENST00000473879 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
BRAT1-205ENST00000473879 TMEM258P61165 79 aa6.72□□□□□ -1.33
BRAT1-205ENST00000473879 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
BRAT1-205ENST00000473879 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
BRAT1-205ENST00000473879 A8MUN3 132 aa6.7□□□□□ -1.34
BRAT1-205ENST00000473879 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
BRAT1-205ENST00000473879 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms