RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
PTCD3-210ENST00000473829 C14orf132Q9NPU4 83 aa9.92□□□□□ -0.82
PTCD3-210ENST00000473829 LINC00313P59037 77 aa9.91□□□□□ -0.82
PTCD3-210ENST00000473829 MTURNQ8N3F0 131 aa9.91□□□□□ -0.82
PTCD3-210ENST00000473829 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
PTCD3-210ENST00000473829 MT1HP80294 61 aa9.86□□□□□ -0.83
PTCD3-210ENST00000473829 C21orf62-AS1Q17RA5 79 aa9.86□□□□□ -0.83
PTCD3-210ENST00000473829 A0A1B0GVX0 72 aa9.85□□□□□ -0.83
PTCD3-210ENST00000473829 H3BT86 120 aa9.85□□□□□ -0.83
PTCD3-210ENST00000473829 PDE6GP18545 87 aa9.85□□□□□ -0.83
PTCD3-210ENST00000473829 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
PTCD3-210ENST00000473829 A0A1B0GW54 56 aa9.82□□□□□ -0.84
PTCD3-210ENST00000473829 J3KT08 172 aa9.82□□□□□ -0.84
PTCD3-210ENST00000473829 SPCS1Q9Y6A9 102 aa9.81□□□□□ -0.84
PTCD3-210ENST00000473829 C8orf87E5RJ46 101 aa9.79□□□□□ -0.84
PTCD3-210ENST00000473829 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
PTCD3-210ENST00000473829 FLGP20930 4061 aaPredicted RBP9.78□□□□□ -0.84
PTCD3-210ENST00000473829 COX6B2Q6YFQ2 88 aa9.77□□□□□ -0.85
PTCD3-210ENST00000473829 KRTAP9-2Q9BYQ4 174 aa9.75□□□□□ -0.85
PTCD3-210ENST00000473829 A8MWP4 228 aa9.74□□□□□ -0.85
PTCD3-210ENST00000473829 IGKV3D-7A0A0C4DH55 119 aa9.73□□□□□ -0.85
PTCD3-210ENST00000473829 NDUFB1O75438 58 aa9.71□□□□□ -0.86
PTCD3-210ENST00000473829 NREPQ16612 68 aa9.71□□□□□ -0.86
PTCD3-210ENST00000473829 PCP4L1A6NKN8 68 aa9.7□□□□□ -0.86
PTCD3-210ENST00000473829 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
PTCD3-210ENST00000473829 PRO0461Q9UI25 63 aa9.7□□□□□ -0.86
PTCD3-210ENST00000473829 K7EP34 96 aa9.69□□□□□ -0.86
PTCD3-210ENST00000473829 PRR15Q8IV56 129 aa9.65□□□□□ -0.86
PTCD3-210ENST00000473829 Q8N9P0 234 aaPredicted RBP9.65□□□□□ -0.86
PTCD3-210ENST00000473829 KRTAP10-6P60371 365 aaPredicted RBP9.63□□□□□ -0.87
PTCD3-210ENST00000473829 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
PTCD3-210ENST00000473829 M0R2T5 61 aa9.62□□□□□ -0.87
PTCD3-210ENST00000473829 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
PTCD3-210ENST00000473829 K7EQZ3 153 aa9.61□□□□□ -0.87
PTCD3-210ENST00000473829 HRES1P13985 223 aa9.6□□□□□ -0.87
PTCD3-210ENST00000473829 Q6ZVQ6 151 aa9.6□□□□□ -0.87
PTCD3-210ENST00000473829 MPLKIPQ8TAP9 179 aa9.57□□□□□ -0.88
PTCD3-210ENST00000473829 BPY2O14599 106 aa9.56□□□□□ -0.88
PTCD3-210ENST00000473829 GTF2H5Q6ZYL4 71 aa9.54□□□□□ -0.88
PTCD3-210ENST00000473829 TMEM254Q8TBM7 123 aa9.54□□□□□ -0.88
PTCD3-210ENST00000473829 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
PTCD3-210ENST00000473829 Q8N9L7 120 aa9.52□□□□□ -0.89
PTCD3-210ENST00000473829 LINC00846Q9NV44 126 aa9.52□□□□□ -0.89
PTCD3-210ENST00000473829 hDV103S1A0JD37 113 aa9.5□□□□□ -0.89
PTCD3-210ENST00000473829 SPINK7P58062 85 aa9.5□□□□□ -0.89
PTCD3-210ENST00000473829 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
PTCD3-210ENST00000473829 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
PTCD3-210ENST00000473829 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
PTCD3-210ENST00000473829 F8W1H4 67 aa9.47□□□□□ -0.89
PTCD3-210ENST00000473829 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
PTCD3-210ENST00000473829 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
PTCD3-210ENST00000473829 UBL5Q9BZL1 73 aa9.44□□□□□ -0.9
PTCD3-210ENST00000473829 NDUFS5O43920 106 aa9.42□□□□□ -0.9
PTCD3-210ENST00000473829 CASC2Q6XLA1 102 aa9.4□□□□□ -0.9
PTCD3-210ENST00000473829 Q5W150 140 aa9.37□□□□□ -0.91
PTCD3-210ENST00000473829 KRTAP9-8Q9BYQ0 159 aa9.36□□□□□ -0.91
PTCD3-210ENST00000473829 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
PTCD3-210ENST00000473829 HCG22E2RYF7 251 aa9.34□□□□□ -0.91
PTCD3-210ENST00000473829 FSIP2Q5CZC0 6907 aa9.33□□□□□ -0.92
PTCD3-210ENST00000473829 IGKV2D-30A0A075B6S6 120 aa9.27□□□□□ -0.93
PTCD3-210ENST00000473829 IGKV2-30P06310 120 aa9.27□□□□□ -0.93
PTCD3-210ENST00000473829 CXCL6P80162 114 aa9.27□□□□□ -0.93
PTCD3-210ENST00000473829 MT2AP02795 61 aa9.24□□□□□ -0.93
PTCD3-210ENST00000473829 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
PTCD3-210ENST00000473829 CRCT1Q9UGL9 99 aa9.22□□□□□ -0.93
PTCD3-210ENST00000473829 A0A1B0GV90 55 aa9.19□□□□□ -0.94
PTCD3-210ENST00000473829 MT1FP04733 61 aa9.18□□□□□ -0.94
PTCD3-210ENST00000473829 ACYP1P07311 99 aa9.18□□□□□ -0.94
PTCD3-210ENST00000473829 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
PTCD3-210ENST00000473829 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
PTCD3-210ENST00000473829 C4orf26Q17RF5 130 aa9.11□□□□□ -0.95
PTCD3-210ENST00000473829 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
PTCD3-210ENST00000473829 KRTAP10-10P60014 251 aa9.08□□□□□ -0.96
PTCD3-210ENST00000473829 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
PTCD3-210ENST00000473829 USH2AO75445 5202 aa9.07□□□□□ -0.96
PTCD3-210ENST00000473829 KRTAP9-3Q9BYQ3 159 aa9.05□□□□□ -0.96
PTCD3-210ENST00000473829 HIST1H4AP62805 103 aaKnown RBP9.02□□□□□ -0.97
PTCD3-210ENST00000473829 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
PTCD3-210ENST00000473829 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
PTCD3-210ENST00000473829 SSPOA2VEC9 5147 aa8.97□□□□□ -0.97
PTCD3-210ENST00000473829 A0A087WVE0 104 aa8.97□□□□□ -0.97
PTCD3-210ENST00000473829 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
PTCD3-210ENST00000473829 C1orf64Q8NEQ6 169 aa8.94□□□□□ -0.98
PTCD3-210ENST00000473829 CYP4F30PQ9H0H9 118 aa8.93□□□□□ -0.98
PTCD3-210ENST00000473829 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
PTCD3-210ENST00000473829 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
PTCD3-210ENST00000473829 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
PTCD3-210ENST00000473829 UQCRQO14949 82 aa8.88□□□□□ -0.99
PTCD3-210ENST00000473829 C5orf47Q569G3 176 aa8.87□□□□□ -0.99
PTCD3-210ENST00000473829 S4R3F8 94 aa8.87□□□□□ -0.99
PTCD3-210ENST00000473829 H0Y9P7 68 aa8.85□□□□□ -0.99
PTCD3-210ENST00000473829 LCA10Q71F78 164 aa8.84□□□□□ -0.99
PTCD3-210ENST00000473829 J3QR89 54 aa8.82□□□□□ -1
PTCD3-210ENST00000473829 ATOX1O00244 68 aa8.8□□□□□ -1
PTCD3-210ENST00000473829 OCR1Q9BZK8 76 aa8.78□□□□□ -1
PTCD3-210ENST00000473829 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
PTCD3-210ENST00000473829 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
PTCD3-210ENST00000473829 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
PTCD3-210ENST00000473829 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
PTCD3-210ENST00000473829 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms