RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 MT-ATP8P03928 68 aa4.08□□□□□ -1.76
A1CF-209ENST00000473480 SS18L2Q9UHA2 77 aa4.08□□□□□ -1.76
A1CF-209ENST00000473480 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.07□□□□□ -1.76
A1CF-209ENST00000473480 TEX49A0A1B0GTD5 131 aa4.06□□□□□ -1.76
A1CF-209ENST00000473480 ETDCA0A1B0GVM5 59 aa4.06□□□□□ -1.76
A1CF-209ENST00000473480 TMEM256-PLSCR3K7ERE1 68 aa4.06□□□□□ -1.76
A1CF-209ENST00000473480 CHTF8P0CG12 524 aa4.06□□□□□ -1.76
A1CF-209ENST00000473480 SPRR1AP35321 89 aa4.06□□□□□ -1.76
A1CF-209ENST00000473480 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
A1CF-209ENST00000473480 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
A1CF-209ENST00000473480 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
A1CF-209ENST00000473480 Q6ZQY7 126 aa4.05□□□□□ -1.76
A1CF-209ENST00000473480 Q6ZRX8 168 aa4.05□□□□□ -1.76
A1CF-209ENST00000473480 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
A1CF-209ENST00000473480 KRTAP4-16G5E9R7 235 aaPredicted RBP4.04□□□□□ -1.76
A1CF-209ENST00000473480 UBE2BP63146 152 aa4.04□□□□□ -1.76
A1CF-209ENST00000473480 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
A1CF-209ENST00000473480 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
A1CF-209ENST00000473480 OBSCN-AS1Q96MR7 158 aa4.03□□□□□ -1.76
A1CF-209ENST00000473480 ACYP1P07311 99 aa4.02□□□□□ -1.77
A1CF-209ENST00000473480 SMIM20Q8N5G0 67 aa4.02□□□□□ -1.77
A1CF-209ENST00000473480 TRBV7-7A0A0K0K1E9 115 aa4.01□□□□□ -1.77
A1CF-209ENST00000473480 C5orf47Q569G3 176 aa4.01□□□□□ -1.77
A1CF-209ENST00000473480 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
A1CF-209ENST00000473480 FAM19A1Q7Z5A9 133 aa4.01□□□□□ -1.77
A1CF-209ENST00000473480 IMUPQ9GZP8 106 aa4.01□□□□□ -1.77
A1CF-209ENST00000473480 LAMTOR3Q9UHA4 124 aa4.01□□□□□ -1.77
A1CF-209ENST00000473480 PDE6GP18545 87 aa4□□□□□ -1.77
A1CF-209ENST00000473480 Q9BRP9 147 aa4□□□□□ -1.77
A1CF-209ENST00000473480 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
A1CF-209ENST00000473480 PSORS1C2Q9UIG4 136 aa4□□□□□ -1.77
A1CF-209ENST00000473480 USH2AO75445 5202 aa3.99□□□□□ -1.77
A1CF-209ENST00000473480 CCDC179H3BU77 68 aa3.99□□□□□ -1.77
A1CF-209ENST00000473480 BCE1O60756 84 aa3.99□□□□□ -1.77
A1CF-209ENST00000473480 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
A1CF-209ENST00000473480 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
A1CF-209ENST00000473480 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
A1CF-209ENST00000473480 IGLV5-48A0A075B6I7 105 aa3.98□□□□□ -1.77
A1CF-209ENST00000473480 LOC110117498A0A087WWA1 95 aa3.98□□□□□ -1.77
A1CF-209ENST00000473480 J3KT08 172 aa3.98□□□□□ -1.77
A1CF-209ENST00000473480 CCKP06307 115 aa3.98□□□□□ -1.77
A1CF-209ENST00000473480 UBE2AP49459 152 aa3.98□□□□□ -1.77
A1CF-209ENST00000473480 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
A1CF-209ENST00000473480 DSCR8Q96T75 97 aa3.98□□□□□ -1.77
A1CF-209ENST00000473480 CRYGAP11844 174 aa3.97□□□□□ -1.77
A1CF-209ENST00000473480 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
A1CF-209ENST00000473480 PRLHP81277 87 aa3.97□□□□□ -1.77
A1CF-209ENST00000473480 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
A1CF-209ENST00000473480 ERC2-IT1O76042 136 aa3.96□□□□□ -1.78
A1CF-209ENST00000473480 IGLV7-43P04211 117 aa3.96□□□□□ -1.78
A1CF-209ENST00000473480 Q6ZQT0 140 aa3.96□□□□□ -1.78
A1CF-209ENST00000473480 DEFB105AQ8NG35 78 aa3.96□□□□□ -1.78
A1CF-209ENST00000473480 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
A1CF-209ENST00000473480 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
A1CF-209ENST00000473480 F8WEM9 126 aa3.95□□□□□ -1.78
A1CF-209ENST00000473480 UQCRQO14949 82 aa3.95□□□□□ -1.78
A1CF-209ENST00000473480 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
A1CF-209ENST00000473480 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
A1CF-209ENST00000473480 SPRR1BP22528 89 aa3.94□□□□□ -1.78
A1CF-209ENST00000473480 C1orf137Q5JT78 98 aa3.94□□□□□ -1.78
A1CF-209ENST00000473480 LINC00643Q86TS7 51 aa3.94□□□□□ -1.78
A1CF-209ENST00000473480 C3orf22Q8N5N4 141 aa3.94□□□□□ -1.78
A1CF-209ENST00000473480 ZNF706Q9Y5V0 76 aaPredicted RBP3.94□□□□□ -1.78
A1CF-209ENST00000473480 NEBP20929 6669 aa3.94□□□□□ -1.78
A1CF-209ENST00000473480 A0A1B0GW54 56 aa3.93□□□□□ -1.78
A1CF-209ENST00000473480 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
A1CF-209ENST00000473480 IGLV8-61A0A075B6I0 122 aa3.92□□□□□ -1.78
A1CF-209ENST00000473480 TMEM258P61165 79 aa3.92□□□□□ -1.78
A1CF-209ENST00000473480 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
A1CF-209ENST00000473480 UBL5Q9BZL1 73 aa3.92□□□□□ -1.78
A1CF-209ENST00000473480 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
A1CF-209ENST00000473480 FAM236AA0A1B0GUQ0 79 aa3.91□□□□□ -1.78
A1CF-209ENST00000473480 FAM236BA0A1B0GV22 79 aa3.91□□□□□ -1.78
A1CF-209ENST00000473480 ATOX1O00244 68 aa3.91□□□□□ -1.78
A1CF-209ENST00000473480 ZNF861PO60384 105 aa3.91□□□□□ -1.78
A1CF-209ENST00000473480 ATP5EP2Q5VTU8 51 aa3.91□□□□□ -1.78
A1CF-209ENST00000473480 Q6JHZ5 121 aa3.91□□□□□ -1.78
A1CF-209ENST00000473480 COX7CP15954 63 aa3.9□□□□□ -1.79
A1CF-209ENST00000473480 HIST1H4AP62805 103 aaKnown RBP3.9□□□□□ -1.79
A1CF-209ENST00000473480 MT1HP80294 61 aa3.9□□□□□ -1.79
A1CF-209ENST00000473480 LINC00483Q53H64 154 aa3.9□□□□□ -1.79
A1CF-209ENST00000473480 SPRR4Q96PI1 79 aa3.9□□□□□ -1.79
A1CF-209ENST00000473480 IGFL1Q6UW32 110 aa3.88□□□□□ -1.79
A1CF-209ENST00000473480 A0A1W2PNM2 257 aa3.87□□□□□ -1.79
A1CF-209ENST00000473480 NREPQ16612 68 aa3.86□□□□□ -1.79
A1CF-209ENST00000473480 IGKV3D-7A0A0C4DH55 119 aa3.85□□□□□ -1.79
A1CF-209ENST00000473480 TPRXLQ17RH7 258 aa3.85□□□□□ -1.79
A1CF-209ENST00000473480 M0R2T5 61 aa3.84□□□□□ -1.79
A1CF-209ENST00000473480 KRTAP4-1Q9BYQ7 146 aa3.84□□□□□ -1.79
A1CF-209ENST00000473480 FAM229BQ4G0N7 80 aa3.83□□□□□ -1.8
A1CF-209ENST00000473480 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
A1CF-209ENST00000473480 A0A087WSZ3 146 aa3.82□□□□□ -1.8
A1CF-209ENST00000473480 BPY2O14599 106 aa3.82□□□□□ -1.8
A1CF-209ENST00000473480 MOBPQ13875 183 aa3.82□□□□□ -1.8
A1CF-209ENST00000473480 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
A1CF-209ENST00000473480 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
A1CF-209ENST00000473480 A0A0G2JQZ4 141 aa3.81□□□□□ -1.8
A1CF-209ENST00000473480 Q5XG85 94 aa3.81□□□□□ -1.8
A1CF-209ENST00000473480 CD164Q04900 197 aa3.8□□□□□ -1.8
A1CF-209ENST00000473480 SSBP3-AS1Q7Z2R9 100 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms