RNA–Protein interactions for RNA: ENST00000473233.5

MCF2L2-208, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2L2, Length 4,748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-208ENST00000473233 TENM1Q9UKZ4 2725 aa9.54□□□□□ -0.88
MCF2L2-208ENST00000473233 LCE6AA0A183 80 aa9.52□□□□□ -0.89
MCF2L2-208ENST00000473233 DMBT1Q9UGM3 2413 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-208ENST00000473233 A0A087X002 238 aa9.51□□□□□ -0.89
MCF2L2-208ENST00000473233 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
MCF2L2-208ENST00000473233 LCA10Q71F78 164 aa9.49□□□□□ -0.89
MCF2L2-208ENST00000473233 SPINK7P58062 85 aa9.48□□□□□ -0.89
MCF2L2-208ENST00000473233 VWFP04275 2813 aa9.48□□□□□ -0.89
MCF2L2-208ENST00000473233 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.89
MCF2L2-208ENST00000473233 CUBNO60494 3623 aa9.46□□□□□ -0.89
MCF2L2-208ENST00000473233 SPENQ96T58 3664 aaKnown RBP9.45□□□□□ -0.9
MCF2L2-208ENST00000473233 PDZD2O15018 2839 aa9.44□□□□□ -0.9
MCF2L2-208ENST00000473233 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
MCF2L2-208ENST00000473233 A0A1B0GU33 70 aa9.39□□□□□ -0.91
MCF2L2-208ENST00000473233 FBN1P35555 2871 aaKnown RBP9.37□□□□□ -0.91
MCF2L2-208ENST00000473233 A0A0D9SG42 100 aa9.37□□□□□ -0.91
MCF2L2-208ENST00000473233 OTOGQ6ZRI0 2925 aa9.35□□□□□ -0.91
MCF2L2-208ENST00000473233 J3QL48 77 aa9.34□□□□□ -0.91
MCF2L2-208ENST00000473233 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
MCF2L2-208ENST00000473233 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
MCF2L2-208ENST00000473233 ASB16-AS1Q495Z4 193 aa9.31□□□□□ -0.92
MCF2L2-208ENST00000473233 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
MCF2L2-208ENST00000473233 SPINT4Q6UDR6 99 aa9.3□□□□□ -0.92
MCF2L2-208ENST00000473233 BSNQ9UPA5 3926 aa9.29□□□□□ -0.92
MCF2L2-208ENST00000473233 PRAC1Q96KF2 57 aa9.28□□□□□ -0.92
MCF2L2-208ENST00000473233 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
MCF2L2-208ENST00000473233 KRTAP13-2Q52LG2 175 aa9.26□□□□□ -0.93
MCF2L2-208ENST00000473233 CSMD2Q7Z408 3487 aa9.24□□□□□ -0.93
MCF2L2-208ENST00000473233 COX6B2Q6YFQ2 88 aa9.23□□□□□ -0.93
MCF2L2-208ENST00000473233 Q6ZSA8 131 aa9.22□□□□□ -0.93
MCF2L2-208ENST00000473233 LINC01554Q52M75 96 aa9.2□□□□□ -0.94
MCF2L2-208ENST00000473233 PKD1L1Q8TDX9 2849 aa9.16□□□□□ -0.94
MCF2L2-208ENST00000473233 ZFHX3Q15911 3703 aa9.15□□□□□ -0.94
MCF2L2-208ENST00000473233 A8MU10 97 aa9.14□□□□□ -0.95
MCF2L2-208ENST00000473233 TGP01266 2768 aa9.14□□□□□ -0.95
MCF2L2-208ENST00000473233 Q5VSD8 79 aa9.13□□□□□ -0.95
MCF2L2-208ENST00000473233 S4R3F8 94 aa9.1□□□□□ -0.95
MCF2L2-208ENST00000473233 CSAG1Q6PB30 78 aa9.1□□□□□ -0.95
MCF2L2-208ENST00000473233 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
MCF2L2-208ENST00000473233 SPATA8Q6RVD6 105 aa9.07□□□□□ -0.96
MCF2L2-208ENST00000473233 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
MCF2L2-208ENST00000473233 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
MCF2L2-208ENST00000473233 A6NN06 94 aa9.02□□□□□ -0.97
MCF2L2-208ENST00000473233 RPL37P61927 97 aaKnown RBP8.97□□□□□ -0.97
MCF2L2-208ENST00000473233 TRRAPQ9Y4A5 3859 aa8.96□□□□□ -0.98
MCF2L2-208ENST00000473233 ANK3Q12955 4377 aaKnown RBP8.95□□□□□ -0.98
MCF2L2-208ENST00000473233 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
MCF2L2-208ENST00000473233 R4GN34 69 aa8.86□□□□□ -0.99
MCF2L2-208ENST00000473233 ROMO1P60602 79 aa8.85□□□□□ -0.99
MCF2L2-208ENST00000473233 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
MCF2L2-208ENST00000473233 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
MCF2L2-208ENST00000473233 A8MUU9 505 aa8.83□□□□□ -1
MCF2L2-208ENST00000473233 ADM2Q7Z4H4 148 aa8.83□□□□□ -1
MCF2L2-208ENST00000473233 VPS13CQ709C8 3753 aa8.82□□□□□ -1
MCF2L2-208ENST00000473233 C20orf166-AS1Q96NR2 134 aa8.81□□□□□ -1
MCF2L2-208ENST00000473233 KRTAP16-1A8MUX0 517 aa8.76□□□□□ -1.01
MCF2L2-208ENST00000473233 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
MCF2L2-208ENST00000473233 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
MCF2L2-208ENST00000473233 FBN3Q75N90 2809 aa8.74□□□□□ -1.01
MCF2L2-208ENST00000473233 M0QZ58 72 aa8.74□□□□□ -1.01
MCF2L2-208ENST00000473233 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
MCF2L2-208ENST00000473233 M0R2T5 61 aa8.64□□□□□ -1.03
MCF2L2-208ENST00000473233 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
MCF2L2-208ENST00000473233 LUZP6Q538Z0 58 aa8.62□□□□□ -1.03
MCF2L2-208ENST00000473233 H3BS24 57 aa8.61□□□□□ -1.03
MCF2L2-208ENST00000473233 ZNF469Q96JG9 3925 aaPredicted RBP8.6□□□□□ -1.03
MCF2L2-208ENST00000473233 MEGF8Q7Z7M0 2845 aa8.59□□□□□ -1.03
MCF2L2-208ENST00000473233 XP32Q5T750 250 aa8.52□□□□□ -1.04
MCF2L2-208ENST00000473233 H0YAA0 97 aa8.51□□□□□ -1.05
MCF2L2-208ENST00000473233 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
MCF2L2-208ENST00000473233 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
MCF2L2-208ENST00000473233 AKAP9Q99996 3911 aa8.34□□□□□ -1.07
MCF2L2-208ENST00000473233 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
MCF2L2-208ENST00000473233 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
MCF2L2-208ENST00000473233 P0C880 135 aa8.27□□□□□ -1.09
MCF2L2-208ENST00000473233 TPRXLQ17RH7 258 aa8.27□□□□□ -1.09
MCF2L2-208ENST00000473233 CSMD3Q7Z407 3707 aa8.26□□□□□ -1.09
MCF2L2-208ENST00000473233 PLAC4Q8WY50 150 aa8.25□□□□□ -1.09
MCF2L2-208ENST00000473233 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
MCF2L2-208ENST00000473233 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
MCF2L2-208ENST00000473233 NDUFAF8A1L188 74 aa8.15□□□□□ -1.1
MCF2L2-208ENST00000473233 A0A0A0MQY5 61 aa8.15□□□□□ -1.11
MCF2L2-208ENST00000473233 TNP1P09430 55 aa8.04□□□□□ -1.12
MCF2L2-208ENST00000473233 DNAH9Q9NYC9 4486 aa7.98□□□□□ -1.13
MCF2L2-208ENST00000473233 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
MCF2L2-208ENST00000473233 PP632Q6XCG6 107 aa7.92□□□□□ -1.14
MCF2L2-208ENST00000473233 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.15
MCF2L2-208ENST00000473233 PLECQ15149 4684 aaKnown RBP7.89□□□□□ -1.15
MCF2L2-208ENST00000473233 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
MCF2L2-208ENST00000473233 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
MCF2L2-208ENST00000473233 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
MCF2L2-208ENST00000473233 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
MCF2L2-208ENST00000473233 DNAH1Q9P2D7 4330 aa7.82□□□□□ -1.16
MCF2L2-208ENST00000473233 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
MCF2L2-208ENST00000473233 DNAH11Q96DT5 4516 aa7.76□□□□□ -1.17
MCF2L2-208ENST00000473233 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
MCF2L2-208ENST00000473233 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.18
MCF2L2-208ENST00000473233 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
MCF2L2-208ENST00000473233 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
MCF2L2-208ENST00000473233 VPS13DQ5THJ4 4388 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms