RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
TM4SF1-202ENST00000472441 OCR1Q9BZK8 76 aa2.91□□□□□ -1.94
TM4SF1-202ENST00000472441 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
TM4SF1-202ENST00000472441 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.94
TM4SF1-202ENST00000472441 TMEM258P61165 79 aa2.9□□□□□ -1.95
TM4SF1-202ENST00000472441 V9GYY9 64 aa2.9□□□□□ -1.95
TM4SF1-202ENST00000472441 KLKP1Q107X0 134 aa2.9□□□□□ -1.95
TM4SF1-202ENST00000472441 PRR15Q8IV56 129 aa2.9□□□□□ -1.95
TM4SF1-202ENST00000472441 LCE6AA0A183 80 aa2.89□□□□□ -1.95
TM4SF1-202ENST00000472441 A8MWP4 228 aa2.89□□□□□ -1.95
TM4SF1-202ENST00000472441 H7BZZ5 65 aa2.89□□□□□ -1.95
TM4SF1-202ENST00000472441 NDUFB1O75438 58 aa2.89□□□□□ -1.95
TM4SF1-202ENST00000472441 SPINK6Q6UWN8 80 aa2.89□□□□□ -1.95
TM4SF1-202ENST00000472441 CASC2Q6XLA1 102 aa2.89□□□□□ -1.95
TM4SF1-202ENST00000472441 Q6ZSA8 131 aa2.89□□□□□ -1.95
TM4SF1-202ENST00000472441 IGHV6-1A0A0B4J1U7 121 aa2.88□□□□□ -1.95
TM4SF1-202ENST00000472441 J3KT08 172 aa2.88□□□□□ -1.95
TM4SF1-202ENST00000472441 CDK2AP2O75956 126 aa2.88□□□□□ -1.95
TM4SF1-202ENST00000472441 Q96NJ1 140 aa2.88□□□□□ -1.95
TM4SF1-202ENST00000472441 A0A087X002 238 aa2.87□□□□□ -1.95
TM4SF1-202ENST00000472441 FAM236DA0A1B0GTK5 79 aa2.87□□□□□ -1.95
TM4SF1-202ENST00000472441 FAM236CP0DP71 79 aa2.87□□□□□ -1.95
TM4SF1-202ENST00000472441 A0A0U1RQV1 116 aa2.87□□□□□ -1.95
TM4SF1-202ENST00000472441 KRTAP29-1A8MX34 341 aaPredicted RBP2.86□□□□□ -1.95
TM4SF1-202ENST00000472441 C4orf26Q17RF5 130 aa2.86□□□□□ -1.95
TM4SF1-202ENST00000472441 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
TM4SF1-202ENST00000472441 NDUFC1O43677 76 aa2.86□□□□□ -1.95
TM4SF1-202ENST00000472441 MMP24-AS1A0A0U1RRL7 71 aa2.86□□□□□ -1.95
TM4SF1-202ENST00000472441 NDUFS5O43920 106 aa2.86□□□□□ -1.95
TM4SF1-202ENST00000472441 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
TM4SF1-202ENST00000472441 KRTAP13-2Q52LG2 175 aa2.85□□□□□ -1.95
TM4SF1-202ENST00000472441 LINC00208Q96KT6 92 aa2.85□□□□□ -1.95
TM4SF1-202ENST00000472441 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
TM4SF1-202ENST00000472441 RYR1P21817 5038 aa2.85□□□□□ -1.95
TM4SF1-202ENST00000472441 PLA2G1BP04054 148 aaKnown RBP2.85□□□□□ -1.95
TM4SF1-202ENST00000472441 MP68P56378 58 aa2.85□□□□□ -1.95
TM4SF1-202ENST00000472441 C8orf17Q9NRJ1 99 aa2.85□□□□□ -1.95
TM4SF1-202ENST00000472441 A0A1B0GVX0 72 aa2.84□□□□□ -1.95
TM4SF1-202ENST00000472441 NOTCH2NLQ7Z3S9 236 aa2.84□□□□□ -1.95
TM4SF1-202ENST00000472441 HSPG2P98160 4391 aa2.84□□□□□ -1.95
TM4SF1-202ENST00000472441 H0Y9P7 68 aa2.84□□□□□ -1.95
TM4SF1-202ENST00000472441 OXTP01178 125 aa2.84□□□□□ -1.95
TM4SF1-202ENST00000472441 LINC00336Q6ZUF6 198 aa2.84□□□□□ -1.95
TM4SF1-202ENST00000472441 RPS28P62857 69 aaKnown RBP2.84□□□□□ -1.96
TM4SF1-202ENST00000472441 PRR4Q16378 134 aa2.84□□□□□ -1.96
TM4SF1-202ENST00000472441 RETNLBQ9BQ08 111 aa2.83□□□□□ -1.96
TM4SF1-202ENST00000472441 FAM229AH3BQW9 127 aa2.83□□□□□ -1.96
TM4SF1-202ENST00000472441 KRTAP1-4P0C5Y4 121 aa2.83□□□□□ -1.96
TM4SF1-202ENST00000472441 C1orf195Q5TG92 126 aa2.83□□□□□ -1.96
TM4SF1-202ENST00000472441 CD164Q04900 197 aa2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 SERP1Q9Y6X1 66 aa2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 FAM229BQ4G0N7 80 aa2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 C1orf64Q8NEQ6 169 aa2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 ZCCHC13Q8WW36 166 aaKnown RBP2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 MRPL34Q9BQ48 92 aaKnown RBP2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
TM4SF1-202ENST00000472441 TRAV22A0A0B4J277 110 aa2.81□□□□□ -1.96
TM4SF1-202ENST00000472441 ABCA13Q86UQ4 5058 aa2.81□□□□□ -1.96
TM4SF1-202ENST00000472441 A0A1B0GVY2 172 aa2.81□□□□□ -1.96
TM4SF1-202ENST00000472441 PRR26Q8N8Z3 221 aa2.81□□□□□ -1.96
TM4SF1-202ENST00000472441 PKHD1L1Q86WI1 4243 aa2.8□□□□□ -1.96
TM4SF1-202ENST00000472441 ATP5EP56381 51 aaPredicted RBP2.8□□□□□ -1.96
TM4SF1-202ENST00000472441 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
TM4SF1-202ENST00000472441 ASB16-AS1Q495Z4 193 aa2.79□□□□□ -1.96
TM4SF1-202ENST00000472441 TP53AIP1Q9HCN2 124 aa2.79□□□□□ -1.96
TM4SF1-202ENST00000472441 LINC00313P59037 77 aa2.79□□□□□ -1.96
TM4SF1-202ENST00000472441 MUC2Q02817 5179 aa2.79□□□□□ -1.96
TM4SF1-202ENST00000472441 LIMD2Q9BT23 127 aa2.79□□□□□ -1.96
TM4SF1-202ENST00000472441 H3BPC8 53 aa2.78□□□□□ -1.96
TM4SF1-202ENST00000472441 C8orf87E5RJ46 101 aa2.77□□□□□ -1.97
TM4SF1-202ENST00000472441 SPINK1P00995 79 aa2.77□□□□□ -1.97
TM4SF1-202ENST00000472441 Q5W150 140 aa2.77□□□□□ -1.97
TM4SF1-202ENST00000472441 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
TM4SF1-202ENST00000472441 BRK1Q8WUW1 75 aa2.77□□□□□ -1.97
TM4SF1-202ENST00000472441 MPLKIPQ8TAP9 179 aa2.77□□□□□ -1.97
TM4SF1-202ENST00000472441 KRTAP4-5Q9BYR2 181 aa2.77□□□□□ -1.97
TM4SF1-202ENST00000472441 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
TM4SF1-202ENST00000472441 H3BS24 57 aa2.76□□□□□ -1.97
TM4SF1-202ENST00000472441 Q5XG85 94 aa2.76□□□□□ -1.97
TM4SF1-202ENST00000472441 FP248Q71RG6 208 aaPredicted RBP2.75□□□□□ -1.97
TM4SF1-202ENST00000472441 LPAP08519 4548 aa2.75□□□□□ -1.97
TM4SF1-202ENST00000472441 KRTAP10-4P60372 401 aaPredicted RBP2.75□□□□□ -1.97
TM4SF1-202ENST00000472441 CYP4F30PQ9H0H9 118 aa2.75□□□□□ -1.97
TM4SF1-202ENST00000472441 LRP2P98164 4655 aa2.74□□□□□ -1.97
TM4SF1-202ENST00000472441 SPAG11AQ6PDA7 123 aa2.74□□□□□ -1.97
TM4SF1-202ENST00000472441 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
TM4SF1-202ENST00000472441 HERC1Q15751 4861 aa2.74□□□□□ -1.97
TM4SF1-202ENST00000472441 C9orf92A6NGG3 77 aa2.73□□□□□ -1.97
TM4SF1-202ENST00000472441 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
TM4SF1-202ENST00000472441 Q8N9P0 234 aaPredicted RBP2.73□□□□□ -1.97
TM4SF1-202ENST00000472441 LOC101927531A0A1B0GV80 90 aa2.73□□□□□ -1.97
TM4SF1-202ENST00000472441 KRTAP16-1A8MUX0 517 aa2.72□□□□□ -1.97
TM4SF1-202ENST00000472441 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
TM4SF1-202ENST00000472441 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
TM4SF1-202ENST00000472441 HERC2O95714 4834 aa2.72□□□□□ -1.97
TM4SF1-202ENST00000472441 BIRC6Q9NR09 4857 aa2.71□□□□□ -1.98
TM4SF1-202ENST00000472441 Q5VSD8 79 aa2.71□□□□□ -1.98
TM4SF1-202ENST00000472441 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
TM4SF1-202ENST00000472441 IGKV2D-30A0A075B6S6 120 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 269.3 ms