RNA–Protein interactions for RNA: ENST00000472253.1

PPP2CA-202, Transcript of protein phosphatase 2 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP2CA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2CA-202ENST00000472253 A8MTW9 85 aa0.79□□□□□ -2.28
PPP2CA-202ENST00000472253 RPL39LQ96EH5 51 aaKnown RBP0.79□□□□□ -2.28
PPP2CA-202ENST00000472253 SRRM2Q9UQ35 2752 aaKnown RBP0.79□□□□□ -2.28
PPP2CA-202ENST00000472253 LRP1Q07954 4544 aaKnown RBP0.78□□□□□ -2.28
PPP2CA-202ENST00000472253 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
PPP2CA-202ENST00000472253 ZFYVE26Q68DK2 2539 aa0.78□□□□□ -2.28
PPP2CA-202ENST00000472253 WNK1Q9H4A3 2382 aa0.76□□□□□ -2.29
PPP2CA-202ENST00000472253 PTPN13Q12923 2485 aa0.75□□□□□ -2.29
PPP2CA-202ENST00000472253 ACANP16112 2415 aa0.75□□□□□ -2.29
PPP2CA-202ENST00000472253 HIVEP3Q5T1R4 2406 aa0.75□□□□□ -2.29
PPP2CA-202ENST00000472253 MAP1BP46821 2468 aaKnown RBP0.75□□□□□ -2.29
PPP2CA-202ENST00000472253 VPS13DQ5THJ4 4388 aa0.74□□□□□ -2.29
PPP2CA-202ENST00000472253 C9orf92A6NGG3 77 aa0.74□□□□□ -2.29
PPP2CA-202ENST00000472253 NAV2Q8IVL1 2488 aa0.74□□□□□ -2.29
PPP2CA-202ENST00000472253 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
PPP2CA-202ENST00000472253 KMT2AQ03164 3969 aa0.73□□□□□ -2.29
PPP2CA-202ENST00000472253 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
PPP2CA-202ENST00000472253 M0QZ58 72 aa0.73□□□□□ -2.29
PPP2CA-202ENST00000472253 LEAP2Q969E1 77 aa0.73□□□□□ -2.29
PPP2CA-202ENST00000472253 PDZD2O15018 2839 aa0.73□□□□□ -2.29
PPP2CA-202ENST00000472253 APC2O95996 2303 aa0.72□□□□□ -2.29
PPP2CA-202ENST00000472253 H3BNG1 76 aa0.72□□□□□ -2.29
PPP2CA-202ENST00000472253 VPS13BQ7Z7G8 4022 aa0.72□□□□□ -2.29
PPP2CA-202ENST00000472253 SPRR2DP22532 72 aa0.71□□□□□ -2.3
PPP2CA-202ENST00000472253 ARHGAP5-AS1Q96IT6 56 aa0.71□□□□□ -2.3
PPP2CA-202ENST00000472253 LPAP08519 4548 aa0.71□□□□□ -2.3
PPP2CA-202ENST00000472253 HSPG2P98160 4391 aa0.7□□□□□ -2.3
PPP2CA-202ENST00000472253 SETXQ7Z333 2677 aaKnown RBP0.7□□□□□ -2.3
PPP2CA-202ENST00000472253 DMBT1Q9UGM3 2413 aaPredicted RBP0.69□□□□□ -2.3
PPP2CA-202ENST00000472253 COL6A5A8TX70 2615 aa0.69□□□□□ -2.3
PPP2CA-202ENST00000472253 NF1P21359 2839 aa0.68□□□□□ -2.3
PPP2CA-202ENST00000472253 PKD1P98161 4303 aa0.68□□□□□ -2.3
PPP2CA-202ENST00000472253 DNAH2Q9P225 4427 aa0.68□□□□□ -2.3
PPP2CA-202ENST00000472253 ANK3Q12955 4377 aaKnown RBP0.67□□□□□ -2.3
PPP2CA-202ENST00000472253 ZZEF1O43149 2961 aa0.66□□□□□ -2.3
PPP2CA-202ENST00000472253 LRP1BQ9NZR2 4599 aa0.66□□□□□ -2.3
PPP2CA-202ENST00000472253 TNP1P09430 55 aa0.66□□□□□ -2.3
PPP2CA-202ENST00000472253 STAB1Q9NY15 2570 aa0.66□□□□□ -2.3
PPP2CA-202ENST00000472253 COL7A1Q02388 2944 aa0.65□□□□□ -2.3
PPP2CA-202ENST00000472253 TOMM7Q9P0U1 55 aa0.65□□□□□ -2.31
PPP2CA-202ENST00000472253 DYNC2H1Q8NCM8 4307 aaKnown RBP0.65□□□□□ -2.31
PPP2CA-202ENST00000472253 HRNRQ86YZ3 2850 aaPredicted RBP0.65□□□□□ -2.31
PPP2CA-202ENST00000472253 CUBNO60494 3623 aa0.65□□□□□ -2.31
PPP2CA-202ENST00000472253 CHD7Q9P2D1 2997 aa0.64□□□□□ -2.31
PPP2CA-202ENST00000472253 ACACAQ13085 2346 aa0.64□□□□□ -2.31
PPP2CA-202ENST00000472253 DNAH9Q9NYC9 4486 aa0.64□□□□□ -2.31
PPP2CA-202ENST00000472253 SETD2Q9BYW2 2564 aaPredicted RBP0.64□□□□□ -2.31
PPP2CA-202ENST00000472253 GCN1Q92616 2671 aaKnown RBP0.63□□□□□ -2.31
PPP2CA-202ENST00000472253 FLNCQ14315 2725 aa0.63□□□□□ -2.31
PPP2CA-202ENST00000472253 SPRR2BP35325 72 aa0.63□□□□□ -2.31
PPP2CA-202ENST00000472253 NCOR2Q9Y618 2525 aa0.63□□□□□ -2.31
PPP2CA-202ENST00000472253 PKHD1L1Q86WI1 4243 aa0.62□□□□□ -2.31
PPP2CA-202ENST00000472253 DNAH3Q8TD57 4116 aa0.62□□□□□ -2.31
PPP2CA-202ENST00000472253 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
PPP2CA-202ENST00000472253 DMXL1Q9Y485 3027 aa0.62□□□□□ -2.31
PPP2CA-202ENST00000472253 NSD1Q96L73 2696 aaPredicted RBP0.61□□□□□ -2.31
PPP2CA-202ENST00000472253 SPENQ96T58 3664 aaKnown RBP0.61□□□□□ -2.31
PPP2CA-202ENST00000472253 SRCAPQ6ZRS2 3230 aa0.61□□□□□ -2.31
PPP2CA-202ENST00000472253 APOBP04114 4563 aaKnown RBP0.61□□□□□ -2.31
PPP2CA-202ENST00000472253 DEFB110Q30KQ9 67 aa0.61□□□□□ -2.31
PPP2CA-202ENST00000472253 DEFB124Q8NES8 71 aa0.61□□□□□ -2.31
PPP2CA-202ENST00000472253 CEP350Q5VT06 3117 aa0.61□□□□□ -2.31
PPP2CA-202ENST00000472253 DNAH8Q96JB1 4490 aa0.6□□□□□ -2.31
PPP2CA-202ENST00000472253 MTORP42345 2549 aa0.6□□□□□ -2.31
PPP2CA-202ENST00000472253 SPTBN4Q9H254 2564 aa0.6□□□□□ -2.31
PPP2CA-202ENST00000472253 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.31
PPP2CA-202ENST00000472253 CACNA1AO00555 2505 aa0.59□□□□□ -2.31
PPP2CA-202ENST00000472253 MACF1Q9UPN3 7388 aaKnown RBP0.59□□□□□ -2.32
PPP2CA-202ENST00000472253 TACC2O95359 2948 aa0.59□□□□□ -2.32
PPP2CA-202ENST00000472253 FLNBO75369 2602 aaKnown RBP0.59□□□□□ -2.32
PPP2CA-202ENST00000472253 HECTD4Q9Y4D8 3996 aa0.59□□□□□ -2.32
PPP2CA-202ENST00000472253 EP400Q96L91 3159 aa0.58□□□□□ -2.32
PPP2CA-202ENST00000472253 RIF1Q5UIP0 2472 aaKnown RBP0.58□□□□□ -2.32
PPP2CA-202ENST00000472253 HMCN2Q8NDA2 5059 aa0.58□□□□□ -2.32
PPP2CA-202ENST00000472253 CD52P31358 61 aa0.58□□□□□ -2.32
PPP2CA-202ENST00000472253 DCHS2Q6V1P9 2916 aa0.58□□□□□ -2.32
PPP2CA-202ENST00000472253 TTTY10Q9BZA0 68 aa0.57□□□□□ -2.32
PPP2CA-202ENST00000472253 Q9Y3F1 56 aa0.57□□□□□ -2.32
PPP2CA-202ENST00000472253 COL12A1Q99715 3063 aa0.57□□□□□ -2.32
PPP2CA-202ENST00000472253 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
PPP2CA-202ENST00000472253 FAT4Q6V0I7 4981 aa0.57□□□□□ -2.32
PPP2CA-202ENST00000472253 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
PPP2CA-202ENST00000472253 PCNTO95613 3336 aa0.56□□□□□ -2.32
PPP2CA-202ENST00000472253 FLGP20930 4061 aaPredicted RBP0.56□□□□□ -2.32
PPP2CA-202ENST00000472253 CCDC168Q8NDH2 2452 aa0.56□□□□□ -2.32
PPP2CA-202ENST00000472253 GOLGB1Q14789 3259 aaKnown RBP0.55□□□□□ -2.32
PPP2CA-202ENST00000472253 FAT3Q8TDW7 4589 aa0.55□□□□□ -2.32
PPP2CA-202ENST00000472253 UTRNP46939 3433 aa0.55□□□□□ -2.32
PPP2CA-202ENST00000472253 LRRK2Q5S007 2527 aa0.55□□□□□ -2.32
PPP2CA-202ENST00000472253 DEFB133Q30KQ1 61 aa0.55□□□□□ -2.32
PPP2CA-202ENST00000472253 DEFB104AQ8WTQ1 72 aa0.55□□□□□ -2.32
PPP2CA-202ENST00000472253 FAM186AA6NE01 2351 aa0.54□□□□□ -2.32
PPP2CA-202ENST00000472253 RANBP2P49792 3224 aaKnown RBP0.54□□□□□ -2.32
PPP2CA-202ENST00000472253 LINC01590Q5TEZ4 76 aa0.54□□□□□ -2.32
PPP2CA-202ENST00000472253 FRYQ5TBA9 3013 aa0.54□□□□□ -2.32
PPP2CA-202ENST00000472253 IGSF10Q6WRI0 2623 aa0.53□□□□□ -2.32
PPP2CA-202ENST00000472253 NBEAL2Q6ZNJ1 2754 aa0.53□□□□□ -2.32
PPP2CA-202ENST00000472253 ANKHD1Q8IWZ3 2542 aaKnown RBP0.53□□□□□ -2.32
PPP2CA-202ENST00000472253 COL6A3P12111 3177 aa0.53□□□□□ -2.32
PPP2CA-202ENST00000472253 TENM2Q9NT68 2774 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms