RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 ATRQ13535 2644 aa1.53□□□□□ -2.17
CDHR3-208ENST00000471910 ITPR1Q14643 2758 aa1.52□□□□□ -2.17
CDHR3-208ENST00000471910 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
CDHR3-208ENST00000471910 DEFB109BQ30KR1 87 aa1.52□□□□□ -2.17
CDHR3-208ENST00000471910 CSPG4Q6UVK1 2322 aa1.52□□□□□ -2.17
CDHR3-208ENST00000471910 MUC3AQ02505 3323 aa1.52□□□□□ -2.17
CDHR3-208ENST00000471910 TLN1Q9Y490 2541 aaKnown RBP1.51□□□□□ -2.17
CDHR3-208ENST00000471910 ACACBO00763 2458 aa1.51□□□□□ -2.17
CDHR3-208ENST00000471910 IGF2RP11717 2491 aa1.51□□□□□ -2.17
CDHR3-208ENST00000471910 RIF1Q5UIP0 2472 aaKnown RBP1.51□□□□□ -2.17
CDHR3-208ENST00000471910 REV3LO60673 3130 aa1.51□□□□□ -2.17
CDHR3-208ENST00000471910 KRTAP26-1Q6PEX3 210 aa1.51□□□□□ -2.17
CDHR3-208ENST00000471910 SPACA4Q8TDM5 124 aa1.51□□□□□ -2.17
CDHR3-208ENST00000471910 PRO0255Q9UI72 69 aa1.51□□□□□ -2.17
CDHR3-208ENST00000471910 BRCA2P51587 3418 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 LRBAP50851 2863 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 NBASA2RRP1 2371 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 UBR5O95071 2799 aaPredicted RBP1.5□□□□□ -2.17
CDHR3-208ENST00000471910 MMP24-AS1A0A0U1RRL7 71 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 NUPR2A6NF83 97 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 SPRR1BP22528 89 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
CDHR3-208ENST00000471910 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 LINC00472Q9H8W2 130 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 TLN2Q9Y4G6 2542 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 FREM2Q5SZK8 3169 aa1.5□□□□□ -2.17
CDHR3-208ENST00000471910 APCP25054 2843 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 NBEAL2Q6ZNJ1 2754 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 DMXL1Q9Y485 3027 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 LAMA3Q16787 3333 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 CELSR2Q9HCU4 2923 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 IGKV3OR2-268A0A0C4DH90 116 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 HTN1P15515 57 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 LELP1Q5T871 98 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 CLPSL2Q6UWE3 100 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 Q6ZSA8 131 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 WFDC10BQ8IUB3 73 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 WFDC13Q8IUB5 93 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 NOP10Q9NPE3 64 aaKnown RBP1.49□□□□□ -2.17
CDHR3-208ENST00000471910 C6orf48Q9UBA6 75 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 DMDP11532 3685 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 DMXL2Q8TDJ6 3036 aa1.49□□□□□ -2.17
CDHR3-208ENST00000471910 TENM2Q9NT68 2774 aa1.48□□□□□ -2.17
CDHR3-208ENST00000471910 SPEGQ15772 3267 aa1.48□□□□□ -2.17
CDHR3-208ENST00000471910 LY6G6CO95867 125 aa1.48□□□□□ -2.17
CDHR3-208ENST00000471910 C4orf3Q8WVX3 66 aa1.48□□□□□ -2.17
CDHR3-208ENST00000471910 CDH23Q9H251 3354 aa1.48□□□□□ -2.17
CDHR3-208ENST00000471910 IGSF10Q6WRI0 2623 aa1.48□□□□□ -2.17
CDHR3-208ENST00000471910 ZFYVE26Q68DK2 2539 aa1.47□□□□□ -2.17
CDHR3-208ENST00000471910 WDFY3Q8IZQ1 3526 aa1.47□□□□□ -2.17
CDHR3-208ENST00000471910 H3BNG1 76 aa1.47□□□□□ -2.17
CDHR3-208ENST00000471910 COX6B2Q6YFQ2 88 aa1.47□□□□□ -2.17
CDHR3-208ENST00000471910 DEFB132Q7Z7B7 95 aa1.47□□□□□ -2.17
CDHR3-208ENST00000471910 MRPL34Q9BQ48 92 aaKnown RBP1.47□□□□□ -2.17
CDHR3-208ENST00000471910 OTOGQ6ZRI0 2925 aa1.46□□□□□ -2.17
CDHR3-208ENST00000471910 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
CDHR3-208ENST00000471910 LYNX1P0DP58 116 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 DEFB105AQ8NG35 78 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 CCL19Q99731 98 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 PRO3102Q9H379 93 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 DCHS1Q96JQ0 3298 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 ADGRG4Q8IZF6 3080 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 BOD1L1Q8NFC6 3051 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 CEP295Q9C0D2 2601 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 ATMQ13315 3056 aa1.46□□□□□ -2.18
CDHR3-208ENST00000471910 FLNCQ14315 2725 aa1.45□□□□□ -2.18
CDHR3-208ENST00000471910 RELNP78509 3460 aa1.45□□□□□ -2.18
CDHR3-208ENST00000471910 FLNAP21333 2647 aaKnown RBP1.44□□□□□ -2.18
CDHR3-208ENST00000471910 A0A087WTM6 91 aa1.44□□□□□ -2.18
CDHR3-208ENST00000471910 DEFB113Q30KQ7 82 aa1.44□□□□□ -2.18
CDHR3-208ENST00000471910 FBN2P35556 2912 aa1.44□□□□□ -2.18
CDHR3-208ENST00000471910 DCHS2Q6V1P9 2916 aa1.44□□□□□ -2.18
CDHR3-208ENST00000471910 SONP18583 2426 aaKnown RBP1.44□□□□□ -2.18
CDHR3-208ENST00000471910 HIVEP3Q5T1R4 2406 aa1.44□□□□□ -2.18
CDHR3-208ENST00000471910 PKD1L1Q8TDX9 2849 aa1.44□□□□□ -2.18
CDHR3-208ENST00000471910 COL12A1Q99715 3063 aa1.43□□□□□ -2.18
CDHR3-208ENST00000471910 PCLOQ9Y6V0 5065 aa1.43□□□□□ -2.18
CDHR3-208ENST00000471910 TEX15Q9BXT5 2789 aa1.43□□□□□ -2.18
CDHR3-208ENST00000471910 F8P00451 2351 aa1.43□□□□□ -2.18
CDHR3-208ENST00000471910 Q6ZRN7 208 aaPredicted RBP1.43□□□□□ -2.18
CDHR3-208ENST00000471910 AKAP9Q99996 3911 aa1.43□□□□□ -2.18
CDHR3-208ENST00000471910 HRNRQ86YZ3 2850 aaPredicted RBP1.43□□□□□ -2.18
CDHR3-208ENST00000471910 SMG1Q96Q15 3661 aaKnown RBP1.43□□□□□ -2.18
CDHR3-208ENST00000471910 NBEAL1Q6ZS30 2694 aa1.42□□□□□ -2.18
CDHR3-208ENST00000471910 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
CDHR3-208ENST00000471910 Q96NJ1 140 aa1.42□□□□□ -2.18
CDHR3-208ENST00000471910 KRTAP4-1Q9BYQ7 146 aa1.42□□□□□ -2.18
CDHR3-208ENST00000471910 CSMD1Q96PZ7 3565 aa1.42□□□□□ -2.18
CDHR3-208ENST00000471910 UTP20O75691 2785 aaKnown RBP1.41□□□□□ -2.18
CDHR3-208ENST00000471910 LOC400499M0QZD8 3231 aa1.41□□□□□ -2.18
CDHR3-208ENST00000471910 NBPF19A0A087WUL8 3843 aa1.41□□□□□ -2.18
CDHR3-208ENST00000471910 H0YAA0 97 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 SPART-AS1P0CW21 52 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 DEFB130BP0DP73 79 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 DEFB130AP0DP74 79 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 CELSR1Q9NYQ6 3014 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 NF1P21359 2839 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 BSNQ9UPA5 3926 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 MYO15AQ9UKN7 3530 aa1.4□□□□□ -2.19
CDHR3-208ENST00000471910 KIAA1109Q2LD37 5005 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms