RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 PCP4P48539 62 aa6.82□□□□□ -1.32
SCNM1-205ENST00000471039 XP32Q5T750 250 aa6.82□□□□□ -1.32
SCNM1-205ENST00000471039 C9orf92A6NGG3 77 aa6.81□□□□□ -1.32
SCNM1-205ENST00000471039 Q6ZVQ6 151 aa6.79□□□□□ -1.32
SCNM1-205ENST00000471039 IGKV3D-7A0A0C4DH55 119 aa6.77□□□□□ -1.33
SCNM1-205ENST00000471039 Q96NJ1 140 aa6.77□□□□□ -1.33
SCNM1-205ENST00000471039 CXCL6P80162 114 aa6.76□□□□□ -1.33
SCNM1-205ENST00000471039 NREPQ16612 68 aa6.75□□□□□ -1.33
SCNM1-205ENST00000471039 MUC2Q02817 5179 aa6.74□□□□□ -1.33
SCNM1-205ENST00000471039 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
SCNM1-205ENST00000471039 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
SCNM1-205ENST00000471039 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
SCNM1-205ENST00000471039 HIST1H4AP62805 103 aaKnown RBP6.7□□□□□ -1.34
SCNM1-205ENST00000471039 ANAPC13Q9BS18 74 aa6.7□□□□□ -1.34
SCNM1-205ENST00000471039 BPY2O14599 106 aa6.69□□□□□ -1.34
SCNM1-205ENST00000471039 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
SCNM1-205ENST00000471039 IGKV4-1P06312 121 aa6.67□□□□□ -1.34
SCNM1-205ENST00000471039 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
SCNM1-205ENST00000471039 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
SCNM1-205ENST00000471039 ATOX1O00244 68 aa6.66□□□□□ -1.34
SCNM1-205ENST00000471039 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
SCNM1-205ENST00000471039 DEFB116Q30KQ4 102 aa6.65□□□□□ -1.34
SCNM1-205ENST00000471039 A0A087WVE0 104 aa6.64□□□□□ -1.35
SCNM1-205ENST00000471039 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
SCNM1-205ENST00000471039 DSCR10P59022 87 aa6.63□□□□□ -1.35
SCNM1-205ENST00000471039 Q75L30 129 aa6.62□□□□□ -1.35
SCNM1-205ENST00000471039 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
SCNM1-205ENST00000471039 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
SCNM1-205ENST00000471039 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
SCNM1-205ENST00000471039 J3KT08 172 aa6.59□□□□□ -1.35
SCNM1-205ENST00000471039 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
SCNM1-205ENST00000471039 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
SCNM1-205ENST00000471039 A8MUU9 505 aa6.58□□□□□ -1.36
SCNM1-205ENST00000471039 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
SCNM1-205ENST00000471039 LINC00313P59037 77 aa6.57□□□□□ -1.36
SCNM1-205ENST00000471039 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
SCNM1-205ENST00000471039 UQCRQO14949 82 aa6.56□□□□□ -1.36
SCNM1-205ENST00000471039 COX7CP15954 63 aa6.56□□□□□ -1.36
SCNM1-205ENST00000471039 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
SCNM1-205ENST00000471039 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
SCNM1-205ENST00000471039 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
SCNM1-205ENST00000471039 Q8N9L7 120 aa6.55□□□□□ -1.36
SCNM1-205ENST00000471039 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
SCNM1-205ENST00000471039 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
SCNM1-205ENST00000471039 A8MWP4 228 aa6.53□□□□□ -1.36
SCNM1-205ENST00000471039 K7EQZ3 153 aa6.53□□□□□ -1.36
SCNM1-205ENST00000471039 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
SCNM1-205ENST00000471039 NDUFB1O75438 58 aa6.51□□□□□ -1.37
SCNM1-205ENST00000471039 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
SCNM1-205ENST00000471039 HCG22E2RYF7 251 aa6.5□□□□□ -1.37
SCNM1-205ENST00000471039 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
SCNM1-205ENST00000471039 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
SCNM1-205ENST00000471039 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
SCNM1-205ENST00000471039 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
SCNM1-205ENST00000471039 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
SCNM1-205ENST00000471039 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
SCNM1-205ENST00000471039 CASC2Q6XLA1 102 aa6.43□□□□□ -1.38
SCNM1-205ENST00000471039 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
SCNM1-205ENST00000471039 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
SCNM1-205ENST00000471039 C20orf197Q8N268 126 aa6.4□□□□□ -1.38
SCNM1-205ENST00000471039 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
SCNM1-205ENST00000471039 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
SCNM1-205ENST00000471039 KLKP1Q107X0 134 aa6.39□□□□□ -1.39
SCNM1-205ENST00000471039 ZCCHC13Q8WW36 166 aaKnown RBP6.39□□□□□ -1.39
SCNM1-205ENST00000471039 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
SCNM1-205ENST00000471039 MT1HP80294 61 aa6.37□□□□□ -1.39
SCNM1-205ENST00000471039 C5orf47Q569G3 176 aa6.37□□□□□ -1.39
SCNM1-205ENST00000471039 COX6B2Q6YFQ2 88 aa6.37□□□□□ -1.39
SCNM1-205ENST00000471039 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
SCNM1-205ENST00000471039 NDUFC1O43677 76 aa6.36□□□□□ -1.39
SCNM1-205ENST00000471039 TMEM258P61165 79 aa6.34□□□□□ -1.39
SCNM1-205ENST00000471039 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
SCNM1-205ENST00000471039 H3BPC8 53 aa6.32□□□□□ -1.4
SCNM1-205ENST00000471039 HRES1P13985 223 aa6.32□□□□□ -1.4
SCNM1-205ENST00000471039 MP68P56378 58 aa6.32□□□□□ -1.4
SCNM1-205ENST00000471039 NDUFS5O43920 106 aa6.31□□□□□ -1.4
SCNM1-205ENST00000471039 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
SCNM1-205ENST00000471039 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
SCNM1-205ENST00000471039 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
SCNM1-205ENST00000471039 H7BZZ5 65 aa6.29□□□□□ -1.4
SCNM1-205ENST00000471039 MPLKIPQ8TAP9 179 aa6.29□□□□□ -1.4
SCNM1-205ENST00000471039 H0Y9P7 68 aa6.28□□□□□ -1.4
SCNM1-205ENST00000471039 SPINK7P58062 85 aa6.28□□□□□ -1.4
SCNM1-205ENST00000471039 TRAV22A0A0B4J277 110 aa6.27□□□□□ -1.41
SCNM1-205ENST00000471039 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
SCNM1-205ENST00000471039 FAM236DA0A1B0GTK5 79 aa6.25□□□□□ -1.41
SCNM1-205ENST00000471039 FAM236CP0DP71 79 aa6.25□□□□□ -1.41
SCNM1-205ENST00000471039 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
SCNM1-205ENST00000471039 RBM12B-AS1Q9P1G2 102 aa6.25□□□□□ -1.41
SCNM1-205ENST00000471039 M0R2T5 61 aa6.23□□□□□ -1.41
SCNM1-205ENST00000471039 Q5W150 140 aa6.23□□□□□ -1.41
SCNM1-205ENST00000471039 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
SCNM1-205ENST00000471039 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
SCNM1-205ENST00000471039 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
SCNM1-205ENST00000471039 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
SCNM1-205ENST00000471039 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
SCNM1-205ENST00000471039 C1orf64Q8NEQ6 169 aa6.21□□□□□ -1.42
SCNM1-205ENST00000471039 C7orf65Q6ZTY9 151 aa6.19□□□□□ -1.42
SCNM1-205ENST00000471039 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
SCNM1-205ENST00000471039 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms