RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
HDLBP-233ENST00000470710 IGKV3D-7A0A0C4DH55 119 aa4.95□□□□□ -1.62
HDLBP-233ENST00000470710 MT-ATP8P03928 68 aa4.95□□□□□ -1.62
HDLBP-233ENST00000470710 IGKV4-1P06312 121 aa4.94□□□□□ -1.62
HDLBP-233ENST00000470710 DSCR10P59022 87 aa4.94□□□□□ -1.62
HDLBP-233ENST00000470710 DEFB116Q30KQ4 102 aa4.94□□□□□ -1.62
HDLBP-233ENST00000470710 A8MWP4 228 aa4.93□□□□□ -1.62
HDLBP-233ENST00000470710 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
HDLBP-233ENST00000470710 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
HDLBP-233ENST00000470710 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
HDLBP-233ENST00000470710 NDUFB1O75438 58 aa4.91□□□□□ -1.62
HDLBP-233ENST00000470710 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
HDLBP-233ENST00000470710 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
HDLBP-233ENST00000470710 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.63
HDLBP-233ENST00000470710 K7EQZ3 153 aa4.9□□□□□ -1.63
HDLBP-233ENST00000470710 A0A1B0GVX0 72 aa4.89□□□□□ -1.63
HDLBP-233ENST00000470710 FP248Q71RG6 208 aaPredicted RBP4.89□□□□□ -1.63
HDLBP-233ENST00000470710 Q8N9L7 120 aa4.89□□□□□ -1.63
HDLBP-233ENST00000470710 HIST1H4AP62805 103 aaKnown RBP4.88□□□□□ -1.63
HDLBP-233ENST00000470710 RETNLBQ9BQ08 111 aa4.87□□□□□ -1.63
HDLBP-233ENST00000470710 IGHV6-1A0A0B4J1U7 121 aa4.86□□□□□ -1.63
HDLBP-233ENST00000470710 C8orf87E5RJ46 101 aa4.86□□□□□ -1.63
HDLBP-233ENST00000470710 A0A087WVE0 104 aa4.85□□□□□ -1.63
HDLBP-233ENST00000470710 C8orf17Q9NRJ1 99 aa4.85□□□□□ -1.63
HDLBP-233ENST00000470710 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
HDLBP-233ENST00000470710 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
HDLBP-233ENST00000470710 SCGB1A1P11684 91 aa4.84□□□□□ -1.63
HDLBP-233ENST00000470710 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
HDLBP-233ENST00000470710 IGLV7-46A0A075B6I9 117 aa4.82□□□□□ -1.64
HDLBP-233ENST00000470710 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
HDLBP-233ENST00000470710 PCP4P48539 62 aa4.82□□□□□ -1.64
HDLBP-233ENST00000470710 LINC00313P59037 77 aa4.82□□□□□ -1.64
HDLBP-233ENST00000470710 FAM236AA0A1B0GUQ0 79 aa4.81□□□□□ -1.64
HDLBP-233ENST00000470710 FAM236BA0A1B0GV22 79 aa4.81□□□□□ -1.64
HDLBP-233ENST00000470710 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
HDLBP-233ENST00000470710 WFDC13Q8IUB5 93 aa4.81□□□□□ -1.64
HDLBP-233ENST00000470710 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
HDLBP-233ENST00000470710 PRR4Q16378 134 aa4.8□□□□□ -1.64
HDLBP-233ENST00000470710 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
HDLBP-233ENST00000470710 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
HDLBP-233ENST00000470710 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
HDLBP-233ENST00000470710 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
HDLBP-233ENST00000470710 HERC1Q15751 4861 aa4.77□□□□□ -1.65
HDLBP-233ENST00000470710 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
HDLBP-233ENST00000470710 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
HDLBP-233ENST00000470710 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
HDLBP-233ENST00000470710 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
HDLBP-233ENST00000470710 ATOX1O00244 68 aa4.76□□□□□ -1.65
HDLBP-233ENST00000470710 SMIM20Q8N5G0 67 aa4.75□□□□□ -1.65
HDLBP-233ENST00000470710 C20orf166-AS1Q96NR2 134 aa4.75□□□□□ -1.65
HDLBP-233ENST00000470710 A8MUU9 505 aa4.74□□□□□ -1.65
HDLBP-233ENST00000470710 OCR1Q9BZK8 76 aa4.74□□□□□ -1.65
HDLBP-233ENST00000470710 TP53AIP1Q9HCN2 124 aa4.74□□□□□ -1.65
HDLBP-233ENST00000470710 Q75L30 129 aa4.73□□□□□ -1.65
HDLBP-233ENST00000470710 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
HDLBP-233ENST00000470710 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
HDLBP-233ENST00000470710 TRAV7A0A075B6U4 112 aa4.72□□□□□ -1.65
HDLBP-233ENST00000470710 UQCRQO14949 82 aa4.72□□□□□ -1.65
HDLBP-233ENST00000470710 NDUFS5O43920 106 aa4.72□□□□□ -1.65
HDLBP-233ENST00000470710 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
HDLBP-233ENST00000470710 RPL37P61927 97 aaKnown RBP4.69□□□□□ -1.66
HDLBP-233ENST00000470710 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
HDLBP-233ENST00000470710 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
HDLBP-233ENST00000470710 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
HDLBP-233ENST00000470710 LRP2P98164 4655 aa4.67□□□□□ -1.66
HDLBP-233ENST00000470710 LPAP08519 4548 aa4.67□□□□□ -1.66
HDLBP-233ENST00000470710 C5orf47Q569G3 176 aa4.67□□□□□ -1.66
HDLBP-233ENST00000470710 ZCCHC13Q8WW36 166 aaKnown RBP4.67□□□□□ -1.66
HDLBP-233ENST00000470710 TRAV22A0A0B4J277 110 aa4.66□□□□□ -1.66
HDLBP-233ENST00000470710 COX7CP15954 63 aa4.66□□□□□ -1.66
HDLBP-233ENST00000470710 Q5W150 140 aa4.66□□□□□ -1.66
HDLBP-233ENST00000470710 H0Y9P7 68 aa4.64□□□□□ -1.67
HDLBP-233ENST00000470710 H3BPC8 53 aa4.64□□□□□ -1.67
HDLBP-233ENST00000470710 MP68P56378 58 aa4.64□□□□□ -1.67
HDLBP-233ENST00000470710 ATP11AUNQ6ZP68 121 aa4.64□□□□□ -1.67
HDLBP-233ENST00000470710 A0A0U1RQV1 116 aa4.61□□□□□ -1.67
HDLBP-233ENST00000470710 LOC101927531A0A1B0GV80 90 aa4.61□□□□□ -1.67
HDLBP-233ENST00000470710 MUC17Q685J3 4493 aa4.61□□□□□ -1.67
HDLBP-233ENST00000470710 SEC61BP60468 96 aaKnown RBP4.6□□□□□ -1.67
HDLBP-233ENST00000470710 PCOTHQ58A44 107 aa4.6□□□□□ -1.67
HDLBP-233ENST00000470710 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
HDLBP-233ENST00000470710 C1orf64Q8NEQ6 169 aa4.6□□□□□ -1.67
HDLBP-233ENST00000470710 LINC00208Q96KT6 92 aa4.6□□□□□ -1.67
HDLBP-233ENST00000470710 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
HDLBP-233ENST00000470710 IGKV2-30P06310 120 aa4.59□□□□□ -1.67
HDLBP-233ENST00000470710 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
HDLBP-233ENST00000470710 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
HDLBP-233ENST00000470710 C7orf65Q6ZTY9 151 aa4.57□□□□□ -1.68
HDLBP-233ENST00000470710 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
HDLBP-233ENST00000470710 SNURFQ9Y675 71 aa4.57□□□□□ -1.68
HDLBP-233ENST00000470710 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
HDLBP-233ENST00000470710 SPINK7P58062 85 aa4.55□□□□□ -1.68
HDLBP-233ENST00000470710 NDUFC1O43677 76 aa4.54□□□□□ -1.68
HDLBP-233ENST00000470710 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
HDLBP-233ENST00000470710 H7BZZ5 65 aa4.5□□□□□ -1.69
HDLBP-233ENST00000470710 HRES1P13985 223 aa4.48□□□□□ -1.69
HDLBP-233ENST00000470710 SPANXA2-OT1Q8N9U9 137 aa4.48□□□□□ -1.69
HDLBP-233ENST00000470710 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
HDLBP-233ENST00000470710 MPLKIPQ8TAP9 179 aa4.46□□□□□ -1.7
HDLBP-233ENST00000470710 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms