RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 MP68P56378 58 aa9.86□□□□□ -0.83
SMARCD3-206ENST00000470588 ATP5EP56381 51 aaPredicted RBP9.86□□□□□ -0.83
SMARCD3-206ENST00000470588 RYR3Q15413 4870 aa9.85□□□□□ -0.83
SMARCD3-206ENST00000470588 APOBP04114 4563 aaKnown RBP9.84□□□□□ -0.83
SMARCD3-206ENST00000470588 H3BPC8 53 aa9.83□□□□□ -0.84
SMARCD3-206ENST00000470588 PLA2G1BP04054 148 aaKnown RBP9.83□□□□□ -0.84
SMARCD3-206ENST00000470588 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
SMARCD3-206ENST00000470588 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
SMARCD3-206ENST00000470588 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
SMARCD3-206ENST00000470588 H0Y9P7 68 aa9.8□□□□□ -0.84
SMARCD3-206ENST00000470588 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
SMARCD3-206ENST00000470588 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
SMARCD3-206ENST00000470588 TYMSOSQ8TAI1 123 aa9.78□□□□□ -0.84
SMARCD3-206ENST00000470588 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
SMARCD3-206ENST00000470588 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
SMARCD3-206ENST00000470588 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
SMARCD3-206ENST00000470588 LINC00208Q96KT6 92 aa9.77□□□□□ -0.85
SMARCD3-206ENST00000470588 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
SMARCD3-206ENST00000470588 C1orf195Q5TG92 126 aa9.75□□□□□ -0.85
SMARCD3-206ENST00000470588 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
SMARCD3-206ENST00000470588 TRAV22A0A0B4J277 110 aa9.74□□□□□ -0.85
SMARCD3-206ENST00000470588 SPINK1P00995 79 aa9.73□□□□□ -0.85
SMARCD3-206ENST00000470588 NDUFS5O43920 106 aa9.71□□□□□ -0.85
SMARCD3-206ENST00000470588 OXTP01178 125 aa9.71□□□□□ -0.85
SMARCD3-206ENST00000470588 C1orf64Q8NEQ6 169 aa9.71□□□□□ -0.85
SMARCD3-206ENST00000470588 Q5VSD8 79 aa9.7□□□□□ -0.86
SMARCD3-206ENST00000470588 LINC00313P59037 77 aa9.68□□□□□ -0.86
SMARCD3-206ENST00000470588 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
SMARCD3-206ENST00000470588 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
SMARCD3-206ENST00000470588 RPS29P62273 56 aaKnown RBP9.65□□□□□ -0.86
SMARCD3-206ENST00000470588 LINC00304Q8N9R0 145 aa9.65□□□□□ -0.87
SMARCD3-206ENST00000470588 FAT1Q14517 4588 aa9.64□□□□□ -0.87
SMARCD3-206ENST00000470588 CYP4F30PQ9H0H9 118 aa9.63□□□□□ -0.87
SMARCD3-206ENST00000470588 SPANXA2-OT1Q8N9U9 137 aa9.63□□□□□ -0.87
SMARCD3-206ENST00000470588 SMIM26A0A096LP01 95 aa9.6□□□□□ -0.87
SMARCD3-206ENST00000470588 PKHD1L1Q86WI1 4243 aa9.59□□□□□ -0.87
SMARCD3-206ENST00000470588 Q8N1X5 172 aa9.58□□□□□ -0.88
SMARCD3-206ENST00000470588 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
SMARCD3-206ENST00000470588 RYR1P21817 5038 aa9.58□□□□□ -0.88
SMARCD3-206ENST00000470588 HSPG2P98160 4391 aa9.58□□□□□ -0.88
SMARCD3-206ENST00000470588 KRTAP13-3Q3SY46 172 aa9.55□□□□□ -0.88
SMARCD3-206ENST00000470588 Q5W150 140 aa9.55□□□□□ -0.88
SMARCD3-206ENST00000470588 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
SMARCD3-206ENST00000470588 LOC101927531A0A1B0GV80 90 aa9.54□□□□□ -0.88
SMARCD3-206ENST00000470588 PRR4Q16378 134 aa9.53□□□□□ -0.88
SMARCD3-206ENST00000470588 SVIPQ8NHG7 77 aa9.53□□□□□ -0.88
SMARCD3-206ENST00000470588 IGLV7-46A0A075B6I9 117 aa9.52□□□□□ -0.88
SMARCD3-206ENST00000470588 PCOTHQ58A44 107 aa9.5□□□□□ -0.89
SMARCD3-206ENST00000470588 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
SMARCD3-206ENST00000470588 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
SMARCD3-206ENST00000470588 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
SMARCD3-206ENST00000470588 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
SMARCD3-206ENST00000470588 KRTAP10-8P60410 259 aa9.42□□□□□ -0.9
SMARCD3-206ENST00000470588 C4orf26Q17RF5 130 aa9.42□□□□□ -0.9
SMARCD3-206ENST00000470588 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
SMARCD3-206ENST00000470588 RETNLBQ9BQ08 111 aa9.39□□□□□ -0.91
SMARCD3-206ENST00000470588 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
SMARCD3-206ENST00000470588 COA5Q86WW8 74 aa9.33□□□□□ -0.92
SMARCD3-206ENST00000470588 Q1T7F1 81 aa9.32□□□□□ -0.92
SMARCD3-206ENST00000470588 HRES1P13985 223 aa9.3□□□□□ -0.92
SMARCD3-206ENST00000470588 FAT3Q8TDW7 4589 aa9.29□□□□□ -0.92
SMARCD3-206ENST00000470588 A8MUU9 505 aa9.28□□□□□ -0.92
SMARCD3-206ENST00000470588 C20orf166-AS1Q96NR2 134 aa9.28□□□□□ -0.92
SMARCD3-206ENST00000470588 V9GYY9 64 aa9.27□□□□□ -0.92
SMARCD3-206ENST00000470588 C9orf92A6NGG3 77 aa9.27□□□□□ -0.93
SMARCD3-206ENST00000470588 LRP1Q07954 4544 aaKnown RBP9.26□□□□□ -0.93
SMARCD3-206ENST00000470588 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
SMARCD3-206ENST00000470588 TNXBP22105 4242 aa9.26□□□□□ -0.93
SMARCD3-206ENST00000470588 FLG2Q5D862 2391 aaPredicted RBP9.25□□□□□ -0.93
SMARCD3-206ENST00000470588 IGKV2D-30A0A075B6S6 120 aa9.25□□□□□ -0.93
SMARCD3-206ENST00000470588 ACYP2P14621 99 aa9.25□□□□□ -0.93
SMARCD3-206ENST00000470588 KRTAP4-5Q9BYR2 181 aa9.23□□□□□ -0.93
SMARCD3-206ENST00000470588 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
SMARCD3-206ENST00000470588 BIRC6Q9NR09 4857 aa9.21□□□□□ -0.93
SMARCD3-206ENST00000470588 C7orf65Q6ZTY9 151 aa9.19□□□□□ -0.94
SMARCD3-206ENST00000470588 Q75L30 129 aa9.15□□□□□ -0.94
SMARCD3-206ENST00000470588 MYCBP2O75592 4640 aa9.13□□□□□ -0.95
SMARCD3-206ENST00000470588 J3QL48 77 aa9.12□□□□□ -0.95
SMARCD3-206ENST00000470588 DMBT1Q9UGM3 2413 aaPredicted RBP9.11□□□□□ -0.95
SMARCD3-206ENST00000470588 PSPHP1O15172 72 aa9.1□□□□□ -0.95
SMARCD3-206ENST00000470588 HERC2O95714 4834 aa9.1□□□□□ -0.95
SMARCD3-206ENST00000470588 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
SMARCD3-206ENST00000470588 A8MUN3 132 aa9.09□□□□□ -0.95
SMARCD3-206ENST00000470588 LINC01558Q9Y6Z2 57 aa9.09□□□□□ -0.95
SMARCD3-206ENST00000470588 PRR15LQ9BU68 103 aa9.04□□□□□ -0.96
SMARCD3-206ENST00000470588 SPINK7P58062 85 aa9.03□□□□□ -0.96
SMARCD3-206ENST00000470588 Q5VV11 94 aa9.03□□□□□ -0.96
SMARCD3-206ENST00000470588 ATP11AUNQ6ZP68 121 aa9□□□□□ -0.97
SMARCD3-206ENST00000470588 ABCA13Q86UQ4 5058 aa9□□□□□ -0.97
SMARCD3-206ENST00000470588 RPL37P61927 97 aaKnown RBP8.98□□□□□ -0.97
SMARCD3-206ENST00000470588 BRK1Q8WUW1 75 aa8.98□□□□□ -0.97
SMARCD3-206ENST00000470588 PRO0628Q9UI54 55 aa8.96□□□□□ -0.97
SMARCD3-206ENST00000470588 XP32Q5T750 250 aa8.96□□□□□ -0.98
SMARCD3-206ENST00000470588 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
SMARCD3-206ENST00000470588 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
SMARCD3-206ENST00000470588 COX6B2Q6YFQ2 88 aa8.86□□□□□ -0.99
SMARCD3-206ENST00000470588 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
SMARCD3-206ENST00000470588 A6NED7 52 aa8.83□□□□□ -1
SMARCD3-206ENST00000470588 A0A1B0GU69 56 aa8.82□□□□□ -1
SMARCD3-206ENST00000470588 LCA10Q71F78 164 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms